| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is cadA [H]
Identifier: 62389380
GI number: 62389380
Start: 505697
End: 507649
Strand: Direct
Name: cadA [H]
Synonym: cg0569
Alternate gene names: 62389380
Gene position: 505697-507649 (Clockwise)
Preceding gene: 62389379
Following gene: 62389381
Centisome position: 15.4
GC content: 52.38
Gene sequence:
>1953_bases ATGCTGGTCAGGGACATTTTTATGGGTGATAATGGGGTTATGAATAAAAAACTTAATACCCCAAATCCCTGGATGTTATT CATCCGCTCATTTGATGGCATCATCACTGTCGCAGCCCTTGTTGCCATCGCAATACATCTCATTTTATGGCTGGCTCTAG ATCTAGATGGCCTTGCTAAAAACTGGCCTTTAATAGCCATCGTTATCGTAGGTGGCATTCCGTTGATGTGGGATGTGCTG AAATCAGCCATTAAAACTCGCGGTGGCGCGGATACTTTAGCAGCAGTCTCCATCATTACTTCTGTGTTGTTAGGGGAGTG GTTGGTTGCCGCGATCATCGTGCTCATGCTCTCTGGTGGTGAAGCGCTAGAAGAGGCAGCATCACGGCGAGCCAGTGGCA CCTTGGACGCACTTGCCCGGCGCGCACCAAGTACAGCTCACCGCCTGTTGGGTGCAACCATTCTTGATGGAACCGAAGAG ATCGCCGTGGAAGAGATCACGGTTGGTGATTTAGTGGCGGTGCTCCCGCATGAACTTTGTCCCGTGGATGGTGAAATCGT GGCAGGCCACGGCACCATGGATGAGTCTTATCTCACGGGTGAGCCCTATGTGGTGAGTAAATCTAAAGGTTCGCAAGCAA TGTCGGGTGCAGTCAATGGTGATACTCCGCTGACGATTGTTGCCACAAAGCTTGCCCATGATTCCAGATACGCCCAAATT GTTGGTGTACTCCATGAAGCAGAAAACAACCGCCCAGAAATGCGCAGGATGGCTGACCGTCTTGGCGCGTGGTATACGGT GATTGCACTTGCCCTCGGTGGTCTTGGCTGGATTGTCTCCGGCGACCCAGTGAGGTTCTTGGCTGTTGTCGTTGTCGCCA CCCCATGTCCATTGCTCATTGCAGTGCCAGTGGCGATCATCGGTGCGATTTCTCTTGCGGCTCGTCGGGGCATCATCGTG AAGAACCCTGGAATGCTGGAAAACGCTTCAGGAGTAAAGACAGTGATGTTCGATAAGACTGGAACGCTCACCTATGGCAG GCCAGTGATTACTGATATCCACACTGCTCCCGGAGTTGAGGAAGATACAGTCCTAGCTTTGGCTGCTTCAGTAGAGCGCT ACTCCAGACACCCGTTGGCTGACGCGATTCGTGAGGGCGCAAAAGCCAGGGAACTTCATCTGCCTGATGTAGTGGAAGTA TCGGAACGTCCAGGACAGGGACTAACCGGCACGGTGGGCGAGCACCTGGTTCGAATAACCAATAGGCGCAGCACACTAGA AATTGATCCAGACAGCAAGAACTACATTCCGGTGACAAGTTCCGGCATGGAATCTGTGGTGCTTGTTGATGATAAATATG CAGCACTCATTCGCCTCCGGGATGAACCTCGTGCATCTGCCAGTGAGTTCATCGCGCACTTGCCCAAGAAGCACAAAGTG GACAAGCTCATGATTATCTCTGGTGATCGCGCATCTGAGGTTCGTTACCTTGCGGACAAGGTTGGCATTGATGAGGTACA CGCAGAGGCCTCACCGGAAGACAAGCTGAACATTGTTAATCGGCATAATGAGCACGGCGCCACCATGTTCTTAGGTGATG GAATCAACGATGCGCCAGCCATGGCCGTTGCCACCGTTGGTGTCGCGATGGGAGCAGACTCCGATGTCACGTCCGAAGCA GCAGATGCTGTGATTTTGGATTCTTCCCTGGAACGTCTCGACGATCTGCTCCACATCAGTGCACGGATGCGTCGAATAGC GTTGCAATCTGCGGGCGGTGGCATGGCGTTGAGTGTCATAGGAATGATCCTCGCGGTATTTGGATTCTTGACGCCACTGA TGGGTGCGATCTTCCAAGAGGTCATTGACGTGCTGGCTATCCTCAATTCCGCTCGGGTCGCACTGCCACGCGGAGCGATT AGTGATTTTGATACGCAAGAAAAAGTTTCTTAG
Upstream 100 bases:
>100_bases GCAGCCAAATACGGCCAACGGCTCCTTGGAAATTTAAGGGGTCGTTGGCCTTATTATTTTAGGGAAAGCCCATCCTTACC TTGCCAAGGGAAGCCTGTAC
Downstream 100 bases:
>100_bases CAGGGTAACCTAAATGTCGTGACATTTCGAGGCGGAAACACTGGCGCAAAGCACGCGGTCGTTGTTGGTTCTGGCCCCAA TGGGTTGACCACGGCGGCGG
Product: cation-transporting ATPase
Products: NA
Alternate protein names: Cadmium efflux ATPase [H]
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MLVRDIFMGDNGVMNKKLNTPNPWMLFIRSFDGIITVAALVAIAIHLILWLALDLDGLAKNWPLIAIVIVGGIPLMWDVL KSAIKTRGGADTLAAVSIITSVLLGEWLVAAIIVLMLSGGEALEEAASRRASGTLDALARRAPSTAHRLLGATILDGTEE IAVEEITVGDLVAVLPHELCPVDGEIVAGHGTMDESYLTGEPYVVSKSKGSQAMSGAVNGDTPLTIVATKLAHDSRYAQI VGVLHEAENNRPEMRRMADRLGAWYTVIALALGGLGWIVSGDPVRFLAVVVVATPCPLLIAVPVAIIGAISLAARRGIIV KNPGMLENASGVKTVMFDKTGTLTYGRPVITDIHTAPGVEEDTVLALAASVERYSRHPLADAIREGAKARELHLPDVVEV SERPGQGLTGTVGEHLVRITNRRSTLEIDPDSKNYIPVTSSGMESVVLVDDKYAALIRLRDEPRASASEFIAHLPKKHKV DKLMIISGDRASEVRYLADKVGIDEVHAEASPEDKLNIVNRHNEHGATMFLGDGINDAPAMAVATVGVAMGADSDVTSEA ADAVILDSSLERLDDLLHISARMRRIALQSAGGGMALSVIGMILAVFGFLTPLMGAIFQEVIDVLAILNSARVALPRGAI SDFDTQEKVS
Sequences:
>Translated_650_residues MLVRDIFMGDNGVMNKKLNTPNPWMLFIRSFDGIITVAALVAIAIHLILWLALDLDGLAKNWPLIAIVIVGGIPLMWDVL KSAIKTRGGADTLAAVSIITSVLLGEWLVAAIIVLMLSGGEALEEAASRRASGTLDALARRAPSTAHRLLGATILDGTEE IAVEEITVGDLVAVLPHELCPVDGEIVAGHGTMDESYLTGEPYVVSKSKGSQAMSGAVNGDTPLTIVATKLAHDSRYAQI VGVLHEAENNRPEMRRMADRLGAWYTVIALALGGLGWIVSGDPVRFLAVVVVATPCPLLIAVPVAIIGAISLAARRGIIV KNPGMLENASGVKTVMFDKTGTLTYGRPVITDIHTAPGVEEDTVLALAASVERYSRHPLADAIREGAKARELHLPDVVEV SERPGQGLTGTVGEHLVRITNRRSTLEIDPDSKNYIPVTSSGMESVVLVDDKYAALIRLRDEPRASASEFIAHLPKKHKV DKLMIISGDRASEVRYLADKVGIDEVHAEASPEDKLNIVNRHNEHGATMFLGDGINDAPAMAVATVGVAMGADSDVTSEA ADAVILDSSLERLDDLLHISARMRRIALQSAGGGMALSVIGMILAVFGFLTPLMGAIFQEVIDVLAILNSARVALPRGAI SDFDTQEKVS >Mature_650_residues MLVRDIFMGDNGVMNKKLNTPNPWMLFIRSFDGIITVAALVAIAIHLILWLALDLDGLAKNWPLIAIVIVGGIPLMWDVL KSAIKTRGGADTLAAVSIITSVLLGEWLVAAIIVLMLSGGEALEEAASRRASGTLDALARRAPSTAHRLLGATILDGTEE IAVEEITVGDLVAVLPHELCPVDGEIVAGHGTMDESYLTGEPYVVSKSKGSQAMSGAVNGDTPLTIVATKLAHDSRYAQI VGVLHEAENNRPEMRRMADRLGAWYTVIALALGGLGWIVSGDPVRFLAVVVVATPCPLLIAVPVAIIGAISLAARRGIIV KNPGMLENASGVKTVMFDKTGTLTYGRPVITDIHTAPGVEEDTVLALAASVERYSRHPLADAIREGAKARELHLPDVVEV SERPGQGLTGTVGEHLVRITNRRSTLEIDPDSKNYIPVTSSGMESVVLVDDKYAALIRLRDEPRASASEFIAHLPKKHKV DKLMIISGDRASEVRYLADKVGIDEVHAEASPEDKLNIVNRHNEHGATMFLGDGINDAPAMAVATVGVAMGADSDVTSEA ADAVILDSSLERLDDLLHISARMRRIALQSAGGGMALSVIGMILAVFGFLTPLMGAIFQEVIDVLAILNSARVALPRGAI SDFDTQEKVS
Specific function: This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI115529486, Length=556, Percent_Identity=28.4172661870504, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI55743071, Length=510, Percent_Identity=30.3921568627451, Blast_Score=184, Evalue=3e-46, Organism=Homo sapiens, GI55743073, Length=485, Percent_Identity=30.7216494845361, Blast_Score=169, Evalue=6e-42, Organism=Escherichia coli, GI1789879, Length=589, Percent_Identity=32.258064516129, Blast_Score=211, Evalue=1e-55, Organism=Escherichia coli, GI1786691, Length=530, Percent_Identity=32.6415094339623, Blast_Score=210, Evalue=2e-55, Organism=Escherichia coli, GI1786914, Length=514, Percent_Identity=27.8210116731518, Blast_Score=109, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17556548, Length=572, Percent_Identity=27.6223776223776, Blast_Score=152, Evalue=5e-37, Organism=Saccharomyces cerevisiae, GI6320475, Length=519, Percent_Identity=28.7090558766859, Blast_Score=179, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6319772, Length=580, Percent_Identity=27.4137931034483, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6321430, Length=557, Percent_Identity=23.1597845601436, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI221329854, Length=374, Percent_Identity=29.9465240641711, Blast_Score=135, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR001366 - InterPro: IPR006404 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: =3.6.3.3 [H]
Molecular weight: Translated: 69083; Mature: 69083
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00154 ATPASE_E1_E2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVRDIFMGDNGVMNKKLNTPNPWMLFIRSFDGIITVAALVAIAIHLILWLALDLDGLAK CCEEEEEECCCCCCCCCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHHHHCHHHHCC NWPLIAIVIVGGIPLMWDVLKSAIKTRGGADTLAAVSIITSVLLGEWLVAAIIVLMLSGG CCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EALEEAASRRASGTLDALARRAPSTAHRLLGATILDGTEEIAVEEITVGDLVAVLPHELC HHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHC PVDGEIVAGHGTMDESYLTGEPYVVSKSKGSQAMSGAVNGDTPLTIVATKLAHDSRYAQI CCCCEEEECCCCCCCCEECCCCEEEECCCCCHHHCCCCCCCCCEEEEEEHHHCCHHHHHH VGVLHEAENNRPEMRRMADRLGAWYTVIALALGGLGWIVSGDPVRFLAVVVVATPCPLLI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCHHHH AVPVAIIGAISLAARRGIIVKNPGMLENASGVKTVMFDKTGTLTYGRPVITDIHTAPGVE HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCEECCCCCEEECCCCCCCC EDTVLALAASVERYSRHPLADAIREGAKARELHLPDVVEVSERPGQGLTGTVGEHLVRIT CCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHH NRRSTLEIDPDSKNYIPVTSSGMESVVLVDDKYAALIRLRDEPRASASEFIAHLPKKHKV CCCCEEEECCCCCCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHCCCCCCC DKLMIISGDRASEVRYLADKVGIDEVHAEASPEDKLNIVNRHNEHGATMFLGDGINDAPA CEEEEEECCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCHH MAVATVGVAMGADSDVTSEAADAVILDSSLERLDDLLHISARMRRIALQSAGGGMALSVI HHHHHHHHHCCCCCCCHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH GMILAVFGFLTPLMGAIFQEVIDVLAILNSARVALPRGAISDFDTQEKVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHCCC >Mature Secondary Structure MLVRDIFMGDNGVMNKKLNTPNPWMLFIRSFDGIITVAALVAIAIHLILWLALDLDGLAK CCEEEEEECCCCCCCCCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHHHHCHHHHCC NWPLIAIVIVGGIPLMWDVLKSAIKTRGGADTLAAVSIITSVLLGEWLVAAIIVLMLSGG CCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EALEEAASRRASGTLDALARRAPSTAHRLLGATILDGTEEIAVEEITVGDLVAVLPHELC HHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHC PVDGEIVAGHGTMDESYLTGEPYVVSKSKGSQAMSGAVNGDTPLTIVATKLAHDSRYAQI CCCCEEEECCCCCCCCEECCCCEEEECCCCCHHHCCCCCCCCCEEEEEEHHHCCHHHHHH VGVLHEAENNRPEMRRMADRLGAWYTVIALALGGLGWIVSGDPVRFLAVVVVATPCPLLI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCHHHH AVPVAIIGAISLAARRGIIVKNPGMLENASGVKTVMFDKTGTLTYGRPVITDIHTAPGVE HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCEECCCCCEEECCCCCCCC EDTVLALAASVERYSRHPLADAIREGAKARELHLPDVVEVSERPGQGLTGTVGEHLVRIT CCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHH NRRSTLEIDPDSKNYIPVTSSGMESVVLVDDKYAALIRLRDEPRASASEFIAHLPKKHKV CCCCEEEECCCCCCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHCCCCCCC DKLMIISGDRASEVRYLADKVGIDEVHAEASPEDKLNIVNRHNEHGATMFLGDGINDAPA CEEEEEECCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCHH MAVATVGVAMGADSDVTSEAADAVILDSSLERLDDLLHISARMRRIALQSAGGGMALSVI HHHHHHHHHCCCCCCCHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH GMILAVFGFLTPLMGAIFQEVIDVLAILNSARVALPRGAISDFDTQEKVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1321115 [H]