| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is epsE [H]
Identifier: 62389252
GI number: 62389252
Start: 375843
End: 376880
Strand: Direct
Name: epsE [H]
Synonym: cg0424
Alternate gene names: 62389252
Gene position: 375843-376880 (Clockwise)
Preceding gene: 62389251
Following gene: 62389253
Centisome position: 11.45
GC content: 41.14
Gene sequence:
>1038_bases ATGCCAAAAGTAAGTGTGGTTACTGGTTTTTATAACCGCTGTGAGCATTTAGAACGAACCATTGAGTCTATTCTTAACCA AACTTATAGCGATTTTGAATTAATTGTTTTTGATGATGCATCGACAGATGGAACAGCTTCACGATTGTTAGAGTTAAAAG AAAAATATGATGATCCGCGTTTCCGATTTATCATTCATGAAGAGAATAAAGGTTTCGTAAAAGGGTTATCAGAAGCAATT TCTGGAGCTAAAGGGCAGTATATTGCAGTCCAGGGATCAGGCGATGTATCTCTTCCTCGCCGTTTAGAGCTTCAGGTAGA GTTTCTAGACGCGAATCCTTCGGTAGGTGCTGTGGGTGGTGCTATCTATAATATTCAAGAAGATACGGGAACACGCAACC CACAGAGATTTGAAAAGCCAATTGCTACATTCGATGATTTATTGACATCTAATCCGTTCACTCACGGAGAAGTGATGTAT CGCTTAGACCTTTATAAGAGTATAGGTGGGTATCGAAGTGGCTTTACTTTTGCTCAAGATCGTGATTTATGGTTGAGGAT GGCGAAAAAAGCAGATCTGGGTATCATTCCAGATTTTCTTTATCACCGTTACACACTTTTAGATGGTGTCTCTTTCGTCC CGGATAAAACTATACGTCAGCGATGCTTTTCAGAAGCTGCGGTGCGACTGGCATTAATGCCAGAAGAGGAAGGAGCTTTA GCCTACTCTAGGCTGGAAGCTGAAGGGCCTACTGCCGTAGTTCCTATCGCTGATAGAGCTGTTCAGAAATTTGTCCCTAA AGCGGCTATTCGCTTATGTCTATATGGTGCTCCGGAAACTGGTTTACACATGGCTCGAGACTATATCCAGAACCCTCTGC GCCGTACCATAGTTGTAGTTTTGATCAGCATCTATTCGTCTAGATTAATTAAGCCTCTTCAAGATATTCTATATAAGTCT ATTTTTAAGGGGGTCTCGATTTCTAAACCTATTAAGAGTTCACTCGTGAAGTTTACAAGAAGAATTCAAGGGAAGTAG
Upstream 100 bases:
>100_bases GATTGTGAAGTTTTATATCTGTCATATTCTGGTGATTTTCGCCCTGCTCATGAAGTGGCGGACGAGCAATGGCCCGATAT AGATTTAGTAAGGAACTAAA
Downstream 100 bases:
>100_bases CGAAAAACCGCATCTACCAAGGTAGTCTACCTTGGAGCGCAAGTTCCTAGTAGTGCTTTGTTCGGAGAGTACGGACACAG TATGGACAATAGTCCAACAA
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MPKVSVVTGFYNRCEHLERTIESILNQTYSDFELIVFDDASTDGTASRLLELKEKYDDPRFRFIIHEENKGFVKGLSEAI SGAKGQYIAVQGSGDVSLPRRLELQVEFLDANPSVGAVGGAIYNIQEDTGTRNPQRFEKPIATFDDLLTSNPFTHGEVMY RLDLYKSIGGYRSGFTFAQDRDLWLRMAKKADLGIIPDFLYHRYTLLDGVSFVPDKTIRQRCFSEAAVRLALMPEEEGAL AYSRLEAEGPTAVVPIADRAVQKFVPKAAIRLCLYGAPETGLHMARDYIQNPLRRTIVVVLISIYSSRLIKPLQDILYKS IFKGVSISKPIKSSLVKFTRRIQGK
Sequences:
>Translated_345_residues MPKVSVVTGFYNRCEHLERTIESILNQTYSDFELIVFDDASTDGTASRLLELKEKYDDPRFRFIIHEENKGFVKGLSEAI SGAKGQYIAVQGSGDVSLPRRLELQVEFLDANPSVGAVGGAIYNIQEDTGTRNPQRFEKPIATFDDLLTSNPFTHGEVMY RLDLYKSIGGYRSGFTFAQDRDLWLRMAKKADLGIIPDFLYHRYTLLDGVSFVPDKTIRQRCFSEAAVRLALMPEEEGAL AYSRLEAEGPTAVVPIADRAVQKFVPKAAIRLCLYGAPETGLHMARDYIQNPLRRTIVVVLISIYSSRLIKPLQDILYKS IFKGVSISKPIKSSLVKFTRRIQGK >Mature_344_residues PKVSVVTGFYNRCEHLERTIESILNQTYSDFELIVFDDASTDGTASRLLELKEKYDDPRFRFIIHEENKGFVKGLSEAIS GAKGQYIAVQGSGDVSLPRRLELQVEFLDANPSVGAVGGAIYNIQEDTGTRNPQRFEKPIATFDDLLTSNPFTHGEVMYR LDLYKSIGGYRSGFTFAQDRDLWLRMAKKADLGIIPDFLYHRYTLLDGVSFVPDKTIRQRCFSEAAVRLALMPEEEGALA YSRLEAEGPTAVVPIADRAVQKFVPKAAIRLCLYGAPETGLHMARDYIQNPLRRTIVVVLISIYSSRLIKPLQDILYKSI FKGVSISKPIKSSLVKFTRRIQGK
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 38831; Mature: 38700
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKVSVVTGFYNRCEHLERTIESILNQTYSDFELIVFDDASTDGTASRLLELKEKYDDPR CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCE FRFIIHEENKGFVKGLSEAISGAKGQYIAVQGSGDVSLPRRLELQVEFLDANPSVGAVGG EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCC AIYNIQEDTGTRNPQRFEKPIATFDDLLTSNPFTHGEVMYRLDLYKSIGGYRSGFTFAQD EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC RDLWLRMAKKADLGIIPDFLYHRYTLLDGVSFVPDKTIRQRCFSEAAVRLALMPEEEGAL HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCH AYSRLEAEGPTAVVPIADRAVQKFVPKAAIRLCLYGAPETGLHMARDYIQNPLRRTIVVV HHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LISIYSSRLIKPLQDILYKSIFKGVSISKPIKSSLVKFTRRIQGK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PKVSVVTGFYNRCEHLERTIESILNQTYSDFELIVFDDASTDGTASRLLELKEKYDDPR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCE FRFIIHEENKGFVKGLSEAISGAKGQYIAVQGSGDVSLPRRLELQVEFLDANPSVGAVGG EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCC AIYNIQEDTGTRNPQRFEKPIATFDDLLTSNPFTHGEVMYRLDLYKSIGGYRSGFTFAQD EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC RDLWLRMAKKADLGIIPDFLYHRYTLLDGVSFVPDKTIRQRCFSEAAVRLALMPEEEGAL HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCH AYSRLEAEGPTAVVPIADRAVQKFVPKAAIRLCLYGAPETGLHMARDYIQNPLRRTIVVV HHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LISIYSSRLIKPLQDILYKSIFKGVSISKPIKSSLVKFTRRIQGK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]