Click here to switch to the map view.

The map label for this gene is tnp17a(ISCg17a)

Identifier: 62389253

GI number: 62389253

Start: 377684

End: 377836

Strand: Direct

Name: tnp17a(ISCg17a)

Synonym: cg0426

Alternate gene names: NA

Gene position: 377684-377836 (Clockwise)

Preceding gene: 62389252

Following gene: 62389254

Centisome position: 11.51

GC content: 50.98

Gene sequence:

>153_bases
ATGAGTGTGTCTGCCACGGCTAAAGCACTGAAGATCGGCTGGGAACTAGTCAACCAGGTTGCACTCGATGCTTGCCGACA
GCTCATTTACAACGACCCGCGCCACCTTGAAGTCGATGAACATGTATGGAAGTATACTCGAAAGCCAGGTTAG

Upstream 100 bases:

>100_bases
TACGAGGAAGATCTTCCACAAATCCTGTACTGCGCGGATGACTGATCCAAGTTCAACCACCGGGGCACTGCTAGATCTTG
CAGCGCTTGGTGATTGACGG

Downstream 100 bases:

>100_bases
CCGTCGAACCTGGTGACCATCTTCGTCGGCCTCACCTCGCTGGGGGATGGGGAGATGGCCTGCTTGACTGCTGGAGGACC
GCCCAGGCCGTACTGCGTAC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 50; Mature: 49

Protein sequence:

>50_residues
MSVSATAKALKIGWELVNQVALDACRQLIYNDPRHLEVDEHVWKYTRKPG

Sequences:

>Translated_50_residues
MSVSATAKALKIGWELVNQVALDACRQLIYNDPRHLEVDEHVWKYTRKPG
>Mature_49_residues
SVSATAKALKIGWELVNQVALDACRQLIYNDPRHLEVDEHVWKYTRKPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5752; Mature: 5620

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSATAKALKIGWELVNQVALDACRQLIYNDPRHLEVDEHVWKYTRKPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SVSATAKALKIGWELVNQVALDACRQLIYNDPRHLEVDEHVWKYTRKPG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA