| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
Click here to switch to the map view.
The map label for this gene is 62184953
Identifier: 62184953
GI number: 62184953
Start: 376116
End: 376907
Strand: Direct
Name: 62184953
Synonym: CAB323
Alternate gene names: NA
Gene position: 376116-376907 (Clockwise)
Preceding gene: 62184951
Following gene: 62184954
Centisome position: 32.87
GC content: 39.9
Gene sequence:
>792_bases ATGAAAAAGTTTCAAAACGTATTAGCATCAACTCATTCTTTCCCTCAGCTCGAAGTCTATTCTGTAGAACAATTACGAGA GGAAATGTCTTGGGAAGAAATTTCCAAGAAGGCCCCGCGCTTGCCCCGAGGCTGGTACGAGCTCATGGGACTATCGAAAA AAGATAGATTAGACTTTTGCCAAGAGTATTGGCTGACTATTCTGGGAATAGAGGATAATCAATTTCCAGGTATTTGTCGT TTTTTTTCTCTCTTAGATAGTTTAGATGTCTATATTTATCGCTCTGCTAATGAGCCCTATGGCGTCAAAATGCTGTACAC TTTTAGTGATGGGCGTTGTGGATTCCAAGGTGAGCCCCCCTTGTTAGATATGCAGGGGTATTGTTTCCCTAGTTTAGGAG ATGACGGTTATCACAGATTTTTTACCATTCATAATGGATTTGGTAAATGGGAAGATGAAGGGATTTTTTCTTACCGTTCT TTGGCTAAGGTACAACATAAATTACAGCAGCTCCTCCTCCGTATGGGCAAGATTCTTCATGATGACAATTGCGCGTCTTT AGGGATTTTTCCTTTTTGTGGTTATGAAGAGCCCTTGACTTACCAGTGTTTTCTTTTTGATCCGGAAGTGCGTAGGGATT TTCCTTCTCCTAACATATTGTTAAGTCAGGAAAGTCTACAGCATCGAACTTTAGGAAGTATTGAACTTTTACATTTAACT ACAAGTCACTATCCTTCTTTCATTTCTTGGCTAGAAAATTACTTGCATAGCGAGGAGGTGTATAGTGGATGA
Upstream 100 bases:
>100_bases TACAAGGCACTAATCAATAAAGGATGTTGTTGTTGAAAGTATCTGCAAGAATGGATTAGCTGTATCCATAGGGAGTGTAA GGTGTGAACAAGGACAGAGG
Downstream 100 bases:
>100_bases ATGTAGAGACTGTGTTTTAGATATCGAGAATCCGGAAGAGCCTGTGGATTTTGCTAACGAGGAAGAAGAAGTCACATGTA TCTGTGTTGTAAAAAACACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKKFQNVLASTHSFPQLEVYSVEQLREEMSWEEISKKAPRLPRGWYELMGLSKKDRLDFCQEYWLTILGIEDNQFPGICR FFSLLDSLDVYIYRSANEPYGVKMLYTFSDGRCGFQGEPPLLDMQGYCFPSLGDDGYHRFFTIHNGFGKWEDEGIFSYRS LAKVQHKLQQLLLRMGKILHDDNCASLGIFPFCGYEEPLTYQCFLFDPEVRRDFPSPNILLSQESLQHRTLGSIELLHLT TSHYPSFISWLENYLHSEEVYSG
Sequences:
>Translated_263_residues MKKFQNVLASTHSFPQLEVYSVEQLREEMSWEEISKKAPRLPRGWYELMGLSKKDRLDFCQEYWLTILGIEDNQFPGICR FFSLLDSLDVYIYRSANEPYGVKMLYTFSDGRCGFQGEPPLLDMQGYCFPSLGDDGYHRFFTIHNGFGKWEDEGIFSYRS LAKVQHKLQQLLLRMGKILHDDNCASLGIFPFCGYEEPLTYQCFLFDPEVRRDFPSPNILLSQESLQHRTLGSIELLHLT TSHYPSFISWLENYLHSEEVYSG >Mature_263_residues MKKFQNVLASTHSFPQLEVYSVEQLREEMSWEEISKKAPRLPRGWYELMGLSKKDRLDFCQEYWLTILGIEDNQFPGICR FFSLLDSLDVYIYRSANEPYGVKMLYTFSDGRCGFQGEPPLLDMQGYCFPSLGDDGYHRFFTIHNGFGKWEDEGIFSYRS LAKVQHKLQQLLLRMGKILHDDNCASLGIFPFCGYEEPLTYQCFLFDPEVRRDFPSPNILLSQESLQHRTLGSIELLHLT TSHYPSFISWLENYLHSEEVYSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30773; Mature: 30773
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFQNVLASTHSFPQLEVYSVEQLREEMSWEEISKKAPRLPRGWYELMGLSKKDRLDFC CCHHHHHHHHCCCCCCEEEHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHCCCCHHHHHHH QEYWLTILGIEDNQFPGICRFFSLLDSLDVYIYRSANEPYGVKMLYTFSDGRCGFQGEPP HHHHEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCC LLDMQGYCFPSLGDDGYHRFFTIHNGFGKWEDEGIFSYRSLAKVQHKLQQLLLRMGKILH EECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC DDNCASLGIFPFCGYEEPLTYQCFLFDPEVRRDFPSPNILLSQESLQHRTLGSIELLHLT CCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCEEECHHHHHHHCCCCEEEEEEE TSHYPSFISWLENYLHSEEVYSG HHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKFQNVLASTHSFPQLEVYSVEQLREEMSWEEISKKAPRLPRGWYELMGLSKKDRLDFC CCHHHHHHHHCCCCCCEEEHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHCCCCHHHHHHH QEYWLTILGIEDNQFPGICRFFSLLDSLDVYIYRSANEPYGVKMLYTFSDGRCGFQGEPP HHHHEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCC LLDMQGYCFPSLGDDGYHRFFTIHNGFGKWEDEGIFSYRSLAKVQHKLQQLLLRMGKILH EECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC DDNCASLGIFPFCGYEEPLTYQCFLFDPEVRRDFPSPNILLSQESLQHRTLGSIELLHLT CCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCEEECHHHHHHHCCCCEEEEEEE TSHYPSFISWLENYLHSEEVYSG HHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA