Definition Chlamydophila abortus S26/3, complete genome.
Accession NC_004552
Length 1,144,377

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The map label for this gene is 62184904

Identifier: 62184904

GI number: 62184904

Start: 289494

End: 291275

Strand: Direct

Name: 62184904

Synonym: CAB263

Alternate gene names: NA

Gene position: 289494-291275 (Clockwise)

Preceding gene: 62184903

Following gene: 62184905

Centisome position: 25.3

GC content: 43.55

Gene sequence:

>1782_bases
ATGTCGATTTCTAGGATTCCAGGCGATGATCACAAAAGTTTGGAGATTTTAGGGGCCAGAGGTCTCTCTCAAATATCTCA
GGATAAACAGGTAAGAGCACCTTTACATGATGCTGTGCCTGCTAATGAAGTCGATCAAGATAAAAGGAGTTTTTCTCATT
CTGTAGGGTTATTAGCGGGATTGATGGTCTTTGCGTTAGCTATGGTGGTGGTGGTTGTTGCTTTAACTTGCCTGGCGCCT
GGAGTGCCTCAGAGTATTGTCTTGGCCATCGCTTTAGGAGGCGTTTCTCTTGGGGGTTTTTCTGTCATGAAAAACATCGT
CAATAAGGTTCGTGATCTTTTTGCTCCGACAATGTCCGAAAAACAAAGGATAAAAAGTGCTGCAGGTATAGGAATCGGAT
TTATCGGATTAGGCTTAGCTATGAAGGTAGGCGCTCATTTTATTCCCGGAGGTTACGGTGGCGTTGTCGGGAATTTAGGT
GGAGCGGCTTATTCTAAGGGTAGCCAATCCGGTTTTACAAGCCTAGCACATTATCTATACATCAAATTTGCACGTTCTGA
AAAGGCGGCGTCCGGAGAGCCTTTAACACGTATAGAAATTATGCAAGAGGCTAAGAAGTTACATCGGATCAGTCTGAGTC
TTTTAGTCGTAGGTGTGGGCTTTGCAGCCTTAGGGATTACTCTTGCTATTGTCGGTACGGTAGTTTTAGGCGGGGTGCCT
GCCACAGCCATGCTTGTGCTTGCTCCTCCTTTCATTTCCATGGGGATAGGATTAGTTTTACAAACGTTACTGCACAGTAG
TATCGGAAAGTGGAAGAGTTTTTTAGACTCTCAAAAAAATCAAGCTCTTTTCCTTGATACAGGGTTGAAGAATATTCGTG
ATGAAGATCTTAGAGCTCACGAGATTGCCAAAGAGCCGTTAAACAAAATCATCAAGAAAGAGATAGACATAGAAGAGGAA
ACCTCGACTTTCGTAAAAACTGAAAAGGTTGTAGAGGATCAGAGAATTACTGCTGAGGAAATAGATAAACGTTTATCGTT
AACTCCCGGGCAAAAAGTGATTTTTGCTCTCTCTGTTTTGCTTGTGCTTGCGGGGTTAGCCGCTGTTGTTACTGCAGGAT
TTGTCGGCATGCCAGCATTACAAGTCCTCCTTGTGGCGACTACAGGATCTTCGGTAGCTTCCACCGTTTTGCCCATGGCC
TCTTCGGGTTTGGTGTATAATGTATTTCAATGCAAGACCCGATTACGTATTGCTAAAGCCCGTTGGAAAGAAGCCAAAGC
AAAATCTCAATTTAAAAAACAGCTCATTGGGGGAGCAGGTTTTTCTAAAACAGAGCTGAATAAAGCTTGGGTACATGTGG
GAAAAGATACCATCCTGGAGACAGACCGTGCTATCCGTGAAGAAATCGCGAATTTTGAGAAAGGCCGCGGGGTAAACAGT
GTGATCGTGGCTGGGATTTTTGTCGTTACTGGGGTGGGAATTATGCTTCTGACTCTTATTCCTACTTTAGCTCCGATTAT
GGCTGGAGTCTTGGCTATAGGATCGACGTTGATGATCATAGGAGCCGCTATGTATTTACAGAAGTTTACAGCGTGGCTGT
ATAATCGTCTGGTCATGTTAAGAGAGCGTTTATACTCACGCAGAAACTATTTAAGCGATATCTCCAGAAAAATAGACATT
TCTACAGAAGATCTTATCGTTGATGCGAATTTAGATGATTTGGATGCGGTTATAGATCTGGATGGGGATGACGATGTCTT
TGCCGATGCTTTTGATACTTAG

Upstream 100 bases:

>100_bases
TATTTTTGTTGTGGTTTATTTGTGAAATTGACCAGTGTTTGATATCTAGATTTGTGATTATAATTAATTAATAGTGAATT
TTATTTTTATTTTTTAATTT

Downstream 100 bases:

>100_bases
AGGCTTATCTAAAATAGAGTTGCCGTATCATCTCCATCGAGTTTCTCTTTATCTAATTACACTATAATTATCCTTCCTAT
TCTCTTTACAAGAAAAATTT

Product: putative inner membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MSISRIPGDDHKSLEILGARGLSQISQDKQVRAPLHDAVPANEVDQDKRSFSHSVGLLAGLMVFALAMVVVVVALTCLAP
GVPQSIVLAIALGGVSLGGFSVMKNIVNKVRDLFAPTMSEKQRIKSAAGIGIGFIGLGLAMKVGAHFIPGGYGGVVGNLG
GAAYSKGSQSGFTSLAHYLYIKFARSEKAASGEPLTRIEIMQEAKKLHRISLSLLVVGVGFAALGITLAIVGTVVLGGVP
ATAMLVLAPPFISMGIGLVLQTLLHSSIGKWKSFLDSQKNQALFLDTGLKNIRDEDLRAHEIAKEPLNKIIKKEIDIEEE
TSTFVKTEKVVEDQRITAEEIDKRLSLTPGQKVIFALSVLLVLAGLAAVVTAGFVGMPALQVLLVATTGSSVASTVLPMA
SSGLVYNVFQCKTRLRIAKARWKEAKAKSQFKKQLIGGAGFSKTELNKAWVHVGKDTILETDRAIREEIANFEKGRGVNS
VIVAGIFVVTGVGIMLLTLIPTLAPIMAGVLAIGSTLMIIGAAMYLQKFTAWLYNRLVMLRERLYSRRNYLSDISRKIDI
STEDLIVDANLDDLDAVIDLDGDDDVFADAFDT

Sequences:

>Translated_593_residues
MSISRIPGDDHKSLEILGARGLSQISQDKQVRAPLHDAVPANEVDQDKRSFSHSVGLLAGLMVFALAMVVVVVALTCLAP
GVPQSIVLAIALGGVSLGGFSVMKNIVNKVRDLFAPTMSEKQRIKSAAGIGIGFIGLGLAMKVGAHFIPGGYGGVVGNLG
GAAYSKGSQSGFTSLAHYLYIKFARSEKAASGEPLTRIEIMQEAKKLHRISLSLLVVGVGFAALGITLAIVGTVVLGGVP
ATAMLVLAPPFISMGIGLVLQTLLHSSIGKWKSFLDSQKNQALFLDTGLKNIRDEDLRAHEIAKEPLNKIIKKEIDIEEE
TSTFVKTEKVVEDQRITAEEIDKRLSLTPGQKVIFALSVLLVLAGLAAVVTAGFVGMPALQVLLVATTGSSVASTVLPMA
SSGLVYNVFQCKTRLRIAKARWKEAKAKSQFKKQLIGGAGFSKTELNKAWVHVGKDTILETDRAIREEIANFEKGRGVNS
VIVAGIFVVTGVGIMLLTLIPTLAPIMAGVLAIGSTLMIIGAAMYLQKFTAWLYNRLVMLRERLYSRRNYLSDISRKIDI
STEDLIVDANLDDLDAVIDLDGDDDVFADAFDT
>Mature_592_residues
SISRIPGDDHKSLEILGARGLSQISQDKQVRAPLHDAVPANEVDQDKRSFSHSVGLLAGLMVFALAMVVVVVALTCLAPG
VPQSIVLAIALGGVSLGGFSVMKNIVNKVRDLFAPTMSEKQRIKSAAGIGIGFIGLGLAMKVGAHFIPGGYGGVVGNLGG
AAYSKGSQSGFTSLAHYLYIKFARSEKAASGEPLTRIEIMQEAKKLHRISLSLLVVGVGFAALGITLAIVGTVVLGGVPA
TAMLVLAPPFISMGIGLVLQTLLHSSIGKWKSFLDSQKNQALFLDTGLKNIRDEDLRAHEIAKEPLNKIIKKEIDIEEET
STFVKTEKVVEDQRITAEEIDKRLSLTPGQKVIFALSVLLVLAGLAAVVTAGFVGMPALQVLLVATTGSSVASTVLPMAS
SGLVYNVFQCKTRLRIAKARWKEAKAKSQFKKQLIGGAGFSKTELNKAWVHVGKDTILETDRAIREEIANFEKGRGVNSV
IVAGIFVVTGVGIMLLTLIPTLAPIMAGVLAIGSTLMIIGAAMYLQKFTAWLYNRLVMLRERLYSRRNYLSDISRKIDIS
TEDLIVDANLDDLDAVIDLDGDDDVFADAFDT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63377; Mature: 63246

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISRIPGDDHKSLEILGARGLSQISQDKQVRAPLHDAVPANEVDQDKRSFSHSVGLLAG
CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHH
LMVFALAMVVVVVALTCLAPGVPQSIVLAIALGGVSLGGFSVMKNIVNKVRDLFAPTMSE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH
KQRIKSAAGIGIGFIGLGLAMKVGAHFIPGGYGGVVGNLGGAAYSKGSQSGFTSLAHYLY
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHCCCCCCHHHHHHHHHHH
IKFARSEKAASGEPLTRIEIMQEAKKLHRISLSLLVVGVGFAALGITLAIVGTVVLGGVP
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ATAMLVLAPPFISMGIGLVLQTLLHSSIGKWKSFLDSQKNQALFLDTGLKNIRDEDLRAH
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCHHHHHHH
EIAKEPLNKIIKKEIDIEEETSTFVKTEKVVEDQRITAEEIDKRLSLTPGQKVIFALSVL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHH
LVLAGLAAVVTAGFVGMPALQVLLVATTGSSVASTVLPMASSGLVYNVFQCKTRLRIAKA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
RWKEAKAKSQFKKQLIGGAGFSKTELNKAWVHVGKDTILETDRAIREEIANFEKGRGVNS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH
VIVAGIFVVTGVGIMLLTLIPTLAPIMAGVLAIGSTLMIIGAAMYLQKFTAWLYNRLVML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RERLYSRRNYLSDISRKIDISTEDLIVDANLDDLDAVIDLDGDDDVFADAFDT
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SISRIPGDDHKSLEILGARGLSQISQDKQVRAPLHDAVPANEVDQDKRSFSHSVGLLAG
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHH
LMVFALAMVVVVVALTCLAPGVPQSIVLAIALGGVSLGGFSVMKNIVNKVRDLFAPTMSE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH
KQRIKSAAGIGIGFIGLGLAMKVGAHFIPGGYGGVVGNLGGAAYSKGSQSGFTSLAHYLY
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHCCCCCCHHHHHHHHHHH
IKFARSEKAASGEPLTRIEIMQEAKKLHRISLSLLVVGVGFAALGITLAIVGTVVLGGVP
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ATAMLVLAPPFISMGIGLVLQTLLHSSIGKWKSFLDSQKNQALFLDTGLKNIRDEDLRAH
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCHHHHHHH
EIAKEPLNKIIKKEIDIEEETSTFVKTEKVVEDQRITAEEIDKRLSLTPGQKVIFALSVL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHH
LVLAGLAAVVTAGFVGMPALQVLLVATTGSSVASTVLPMASSGLVYNVFQCKTRLRIAKA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
RWKEAKAKSQFKKQLIGGAGFSKTELNKAWVHVGKDTILETDRAIREEIANFEKGRGVNS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH
VIVAGIFVVTGVGIMLLTLIPTLAPIMAGVLAIGSTLMIIGAAMYLQKFTAWLYNRLVML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RERLYSRRNYLSDISRKIDISTEDLIVDANLDDLDAVIDLDGDDDVFADAFDT
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA