| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184905
Identifier: 62184905
GI number: 62184905
Start: 291461
End: 293500
Strand: Direct
Name: 62184905
Synonym: CAB264
Alternate gene names: NA
Gene position: 291461-293500 (Clockwise)
Preceding gene: 62184904
Following gene: 62184917
Centisome position: 25.47
GC content: 45.39
Gene sequence:
>2040_bases ATGGCGGGGGTAAGCGGAATTGGAGGTAGTGGAGGACCAAGAAACATCCCTCCTCATGATCATGACGATGATAAGCGTTC TGATGCGCATCAATTCGGAGGGCATAACATAGTTTATGGGAATGAGGCCGGTGAACACAGCCCCAGCTCAGTAAAAGATA GAGCACAATTGTTAATGCAAAGTGGTTTTCAGGTACATAATCCTGAAGAAGTTGCATCGAGATCATCTGTTTCACAAAGT GAGGGCACCAAATCTGGGTTCTTCGGACGTATGTGGGATGCCGTAAAGGGAATATTCGGAAAGAAAACACAGAAGGAATC TGTGACAGAGATTTCTGGTCCGGAGATTTCTGGGTATAAAAAATATGGTAGACGTCTTCCCGAGGCGAGAGCTTTACGCA CGCATTTCCAATCCCAAGAAGGGGGAATGCGGATTGATTCAGGAGACACAGATATTGCAGATGCAGAAGAAGTGGCTGTA GGGGAATTGGTCGATATAGAACATTCTTCAGATGCAGAATCGTCATCGAAGACTTCAGGCTCTCCAGGATTAGCCAAGCG TGTTCGCGGTTGGTGGGATTACGCTAATAGGAAACAAGAAGAGCCTGTCGATGGTAGAGTCGGTTTGAGTCTTGGTGAAT TACAAGATATGGCAGACAGGTTCGCTAAGATGATGAATGAAACGGATAATGAAAGCGAGCGTGTTCTATTTGCGCAATAT CGGGATACGTACGAAGGCTATATTCAAGATATGTTGTCTTCGGGAGCGACCTCGTCTTATGATAAATATAGCTTACTCGA TGGTTCTTTTGATGAGACGGCTTCAGTACACCATAGGGATGAAATTGGAGAGGCGATATTTTTAGATAGCGATCAGGATG TATCCCAAGCTTCTGAAGCAGATCTTATGCGTATGATGGATACGGGACATAATGCTAATAGTATTTTAGGCGATCTCAGC CCTGAAGTACAGCAAGTCTTAAAAGAAGCGCAGAGCATGCGTGCCTCATTGGATGCTGGGATTTCAGACAATGTCACTCC CCAGTTAAGAGAACGCATTCTTAGCGCTATGCATAGGCTCCTCTCAGGAATCCAAAGCATTCTTACTGTGATCCGGAATA GTTTAATTGCTTTATCTCGTTTAGTAAGAAGTGGTTTAAGAGCGTTAGGCGAATTCGTCAGGCGTCGAGGTACTGTAACA GAGGATCATTATCATGTACCCATCAATGATGCTGATATCTATCCAGGAGCAAGAGAATTGCTTACACAGTACACCGATTC GAGCAGTTCAGATGGGTCCGAGGAGAATTTTGTTATTCCTAGGAGTGTAGTAGAGGCTTGGGCAGATGGCATTCCTGAAG TTGTCTATATGACTCGTGTTGGGGAGGGATTCAGAGTAGATGATGAGCAACTAGCAGAGAACAGAGACGACGTGGTGTAT GAGGAGATTCCTGTGAGGAATTTTCTTCCAAGAACGCAGGAAGATGCGGTCTATGAAACGATGCATCCTAGGGGCTTGGG CAGTACGCCCGTAGAGGACGATGAAGTGGTGTATGAGGATATGAGTGGGCAACAAGGCAATACTCAGGAAGAGCCTGTAT ATGATACGCCACGATCTTCGCCTATATATGACGTTCCAGGAAGTGCTTCGGATCTGTATGATGTTCCTAGGCCTTTTCCT TTGTTGAATGAAGTAGATGATCAAGGTTATATGATACCAAGTGCTATACGAGGTGGCGGCGTTCTTGGCGTAACTCCTGG ATTTGGCAATGCTTTAGTTGCTGTTTCTTCAGCAGCCTATTTTGATAGGTTAATTGAGGAAAATGACAGAATGCGCGAAG GCATATGGACAACTCAGAGTTCTGCAGATTTTGGTCTTGAAGAAGCGAGACGGAGTTACGCTCGGGAGGGTCGACCTTTA CCATCGTTACCTCCTCTTGAAACACCACCACCCAGTCCTTATGGAAATAATCGGGTGATGCAACTGCTACGTCAGCTGCA AAGTGGTATTAGTAATGCCTGGAAAAGCAGACGTAAATAA
Upstream 100 bases:
>100_bases TTACAAGAAAAATTTATCAATTTATTTTTTTAATAATTGGATGTTGATAAAATTAGAATAATAATAATTTATTTTTTATC TTTATACAAGAGGCACACAT
Downstream 100 bases:
>100_bases GGACTTAACAAGGCTATAGAGTTGTTCTACAGCCTTGTTTTCTATTTCTAAAAGATTAACGAGCTTCCTGCTTTTAGGTA ATTAGAGAAAGTAGAAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 679; Mature: 678
Protein sequence:
>679_residues MAGVSGIGGSGGPRNIPPHDHDDDKRSDAHQFGGHNIVYGNEAGEHSPSSVKDRAQLLMQSGFQVHNPEEVASRSSVSQS EGTKSGFFGRMWDAVKGIFGKKTQKESVTEISGPEISGYKKYGRRLPEARALRTHFQSQEGGMRIDSGDTDIADAEEVAV GELVDIEHSSDAESSSKTSGSPGLAKRVRGWWDYANRKQEEPVDGRVGLSLGELQDMADRFAKMMNETDNESERVLFAQY RDTYEGYIQDMLSSGATSSYDKYSLLDGSFDETASVHHRDEIGEAIFLDSDQDVSQASEADLMRMMDTGHNANSILGDLS PEVQQVLKEAQSMRASLDAGISDNVTPQLRERILSAMHRLLSGIQSILTVIRNSLIALSRLVRSGLRALGEFVRRRGTVT EDHYHVPINDADIYPGARELLTQYTDSSSSDGSEENFVIPRSVVEAWADGIPEVVYMTRVGEGFRVDDEQLAENRDDVVY EEIPVRNFLPRTQEDAVYETMHPRGLGSTPVEDDEVVYEDMSGQQGNTQEEPVYDTPRSSPIYDVPGSASDLYDVPRPFP LLNEVDDQGYMIPSAIRGGGVLGVTPGFGNALVAVSSAAYFDRLIEENDRMREGIWTTQSSADFGLEEARRSYAREGRPL PSLPPLETPPPSPYGNNRVMQLLRQLQSGISNAWKSRRK
Sequences:
>Translated_679_residues MAGVSGIGGSGGPRNIPPHDHDDDKRSDAHQFGGHNIVYGNEAGEHSPSSVKDRAQLLMQSGFQVHNPEEVASRSSVSQS EGTKSGFFGRMWDAVKGIFGKKTQKESVTEISGPEISGYKKYGRRLPEARALRTHFQSQEGGMRIDSGDTDIADAEEVAV GELVDIEHSSDAESSSKTSGSPGLAKRVRGWWDYANRKQEEPVDGRVGLSLGELQDMADRFAKMMNETDNESERVLFAQY RDTYEGYIQDMLSSGATSSYDKYSLLDGSFDETASVHHRDEIGEAIFLDSDQDVSQASEADLMRMMDTGHNANSILGDLS PEVQQVLKEAQSMRASLDAGISDNVTPQLRERILSAMHRLLSGIQSILTVIRNSLIALSRLVRSGLRALGEFVRRRGTVT EDHYHVPINDADIYPGARELLTQYTDSSSSDGSEENFVIPRSVVEAWADGIPEVVYMTRVGEGFRVDDEQLAENRDDVVY EEIPVRNFLPRTQEDAVYETMHPRGLGSTPVEDDEVVYEDMSGQQGNTQEEPVYDTPRSSPIYDVPGSASDLYDVPRPFP LLNEVDDQGYMIPSAIRGGGVLGVTPGFGNALVAVSSAAYFDRLIEENDRMREGIWTTQSSADFGLEEARRSYAREGRPL PSLPPLETPPPSPYGNNRVMQLLRQLQSGISNAWKSRRK >Mature_678_residues AGVSGIGGSGGPRNIPPHDHDDDKRSDAHQFGGHNIVYGNEAGEHSPSSVKDRAQLLMQSGFQVHNPEEVASRSSVSQSE GTKSGFFGRMWDAVKGIFGKKTQKESVTEISGPEISGYKKYGRRLPEARALRTHFQSQEGGMRIDSGDTDIADAEEVAVG ELVDIEHSSDAESSSKTSGSPGLAKRVRGWWDYANRKQEEPVDGRVGLSLGELQDMADRFAKMMNETDNESERVLFAQYR DTYEGYIQDMLSSGATSSYDKYSLLDGSFDETASVHHRDEIGEAIFLDSDQDVSQASEADLMRMMDTGHNANSILGDLSP EVQQVLKEAQSMRASLDAGISDNVTPQLRERILSAMHRLLSGIQSILTVIRNSLIALSRLVRSGLRALGEFVRRRGTVTE DHYHVPINDADIYPGARELLTQYTDSSSSDGSEENFVIPRSVVEAWADGIPEVVYMTRVGEGFRVDDEQLAENRDDVVYE EIPVRNFLPRTQEDAVYETMHPRGLGSTPVEDDEVVYEDMSGQQGNTQEEPVYDTPRSSPIYDVPGSASDLYDVPRPFPL LNEVDDQGYMIPSAIRGGGVLGVTPGFGNALVAVSSAAYFDRLIEENDRMREGIWTTQSSADFGLEEARRSYAREGRPLP SLPPLETPPPSPYGNNRVMQLLRQLQSGISNAWKSRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74919; Mature: 74788
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVSGIGGSGGPRNIPPHDHDDDKRSDAHQFGGHNIVYGNEAGEHSPSSVKDRAQLLMQ CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHH SGFQVHNPEEVASRSSVSQSEGTKSGFFGRMWDAVKGIFGKKTQKESVTEISGPEISGYK CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHH KYGRRLPEARALRTHFQSQEGGMRIDSGDTDIADAEEVAVGELVDIEHSSDAESSSKTSG HHHHHCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCC SPGLAKRVRGWWDYANRKQEEPVDGRVGLSLGELQDMADRFAKMMNETDNESERVLFAQY CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHEEEHHHH RDTYEGYIQDMLSSGATSSYDKYSLLDGSFDETASVHHRDEIGEAIFLDSDQDVSQASEA HHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHH DLMRMMDTGHNANSILGDLSPEVQQVLKEAQSMRASLDAGISDNVTPQLRERILSAMHRL HHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH LSGIQSILTVIRNSLIALSRLVRSGLRALGEFVRRRGTVTEDHYHVPINDADIYPGAREL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHH LTQYTDSSSSDGSEENFVIPRSVVEAWADGIPEVVYMTRVGEGFRVDDEQLAENRDDVVY HHHHCCCCCCCCCCCCEECCHHHHHHHHCCCCCEEHHHHCCCCCCCCHHHHHCCCCCCCH EEIPVRNFLPRTQEDAVYETMHPRGLGSTPVEDDEVVYEDMSGQQGNTQEEPVYDTPRSS HHCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC PIYDVPGSASDLYDVPRPFPLLNEVDDQGYMIPSAIRGGGVLGVTPGFGNALVAVSSAAY CCEECCCCCHHHHCCCCCCCHHHCCCCCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHH FDRLIEENDRMREGIWTTQSSADFGLEEARRSYAREGRPLPSLPPLETPPPSPYGNNRVM HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH QLLRQLQSGISNAWKSRRK HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGVSGIGGSGGPRNIPPHDHDDDKRSDAHQFGGHNIVYGNEAGEHSPSSVKDRAQLLMQ CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHH SGFQVHNPEEVASRSSVSQSEGTKSGFFGRMWDAVKGIFGKKTQKESVTEISGPEISGYK CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHH KYGRRLPEARALRTHFQSQEGGMRIDSGDTDIADAEEVAVGELVDIEHSSDAESSSKTSG HHHHHCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCC SPGLAKRVRGWWDYANRKQEEPVDGRVGLSLGELQDMADRFAKMMNETDNESERVLFAQY CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHEEEHHHH RDTYEGYIQDMLSSGATSSYDKYSLLDGSFDETASVHHRDEIGEAIFLDSDQDVSQASEA HHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHH DLMRMMDTGHNANSILGDLSPEVQQVLKEAQSMRASLDAGISDNVTPQLRERILSAMHRL HHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH LSGIQSILTVIRNSLIALSRLVRSGLRALGEFVRRRGTVTEDHYHVPINDADIYPGAREL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHH LTQYTDSSSSDGSEENFVIPRSVVEAWADGIPEVVYMTRVGEGFRVDDEQLAENRDDVVY HHHHCCCCCCCCCCCCEECCHHHHHHHHCCCCCEEHHHHCCCCCCCCHHHHHCCCCCCCH EEIPVRNFLPRTQEDAVYETMHPRGLGSTPVEDDEVVYEDMSGQQGNTQEEPVYDTPRSS HHCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC PIYDVPGSASDLYDVPRPFPLLNEVDDQGYMIPSAIRGGGVLGVTPGFGNALVAVSSAAY CCEECCCCCHHHHCCCCCCCHHHCCCCCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHH FDRLIEENDRMREGIWTTQSSADFGLEEARRSYAREGRPLPSLPPLETPPPSPYGNNRVM HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH QLLRQLQSGISNAWKSRRK HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA