| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184662
Identifier: 62184662
GI number: 62184662
Start: 21806
End: 23725
Strand: Direct
Name: 62184662
Synonym: CAB015
Alternate gene names: NA
Gene position: 21806-23725 (Clockwise)
Preceding gene: 62184661
Following gene: 62184664
Centisome position: 1.91
GC content: 43.59
Gene sequence:
>1920_bases ATGGTTAATCCTGTTGGTCCTATAGATGAATCTAAAAACATTGCTCCTGCAGACTTATCTACCTTAGGTATGCAGGCTAG CGCCGCCAATCGCAGCGCAGAAGCTGAATCCATAGCCGAAGTCGAAGGTAAAAACGGATCGCCTCGGCCTTCGGTAAATA CCTTGGGACGGCTGAGTTTTCTATCTTCAGCAAGAAATGCTTTAATCAACTTTTTTAATAAGATATCTGCTTTGTTCACA GGAAAGTCTGTGCCTAAGGATTTTGAAGAGGCCAAGACTCAGGCATCGAATGCGCAGAATGCTCTGAAAACAGCGAAAAC CTTTGATGAGTTTAAGACAGCGCTACAACAACTCCAAGATGCGATCAAATACATGGAACAATTTGCTGAAACTGACGAAC AAAAAACGGAGGTAGCAACATTAAAGGCAGCGCTAGCAGAGAAACAGCCTATTATTGATACAATCAATAAGCTCGGGGGG ATTCTTGAAGAAAACGAAAAGCTTTTGGAGGCAATAAAAACGACTTCATCTATCGATCAGATTACAGGAGTTGCTGGGCA GGTAGAAGTTAACAAAGCTGCTGCGGCAGCTCTTATTGAAGAGTTGAAGAAATTAGGTGTTACAGCAGACAGCTACCCCG TAATCGGCGATACGGAAACTAAAATTAACACATCCTCAACAGAAATCACTAAAGTAGCAGAAGCTATAAACAGCGCTTAT ACTGCTGGGAAAAATAGTACTACAGCTGTCGGTCAAGCTCAGGCGAATAATAGTCCCGCGAACATAGAAGCTTCTAAGAA CACGATAAAAGAGGCAAAATCTACTATAGACGCTGCTCTTGGTTTAGCTCCAGATTCTCCAATCGTTAAAGCTGCTCAGA AAGAACAACAAAAGGCAGTGAAAGACATCGACAAAATTAAACCTAGTGGGGGTAGTGATGTGCCTATCGGTGGACCTGGA GCTCCGGGTAGTGTGGGAACTTCTCAGAACCGTGGTACTACTGTAGGGGAAGCTAGGATATCGATGTTACTTGCTGATGT GGACAACGAGACAGCCGCGATCATCATGCAAGGTTTTAGAAACATGATTGATAACTTCCATACGCAAAATCCTGATATTA CAGCGCCATTGGAAGAAGTTTTAGCTCAGGTCACAGATTTAACAACGCAAGCCAATCCTGCGGATGCAGAAGCTACAACA CAATTACAAGAAATACAACAAACTTTACAAGAAGCGCTTCAGGGTATTTCAGGCGAAGAAGGTTTGACGAATGCCCTAGG TGCTATAACAACGGCTGCTTCGATTTCTACAGGAGCTCCTATAGCATCGGCAAATCAGGGCGGTTCAGCTGTAAAGCAGC TTTACAAAACAAGTTCGGCATCTGCGAGCTCTAAATCTTATGTAGATACATTATCAGCCGGTTACGGAGCTTATCAATCT CTAAATGACGTGTATTCACGTAGCAGCGCTGCTAATCGTGAAGTGTTAGATCGTACTTCTACGCCAGCATTAACGCGAAC GGTGTCTAGAACAGAAACGCAACCTCGTGATAACGACACTGCTGCACAAAGGTTCGCAAGAACGATAGCTGGCAATAGCC ATACTCTTGGGGATGTTTATGCTTCCGTAAACGTATTACAAACATTACTGGGTGTATTACAAAGTAATCCGCAAGCAAAT GAAGACGAGATTAAGCAAAAGCTTACATCCGCAATCACGAAAGCTCCACAATCGGGCTATCCTTATGTCCAGCTTTCCAA TGATGCGACACAGAAGTTTATTGCAAAACTTGAGGATGAGTTTGCTAGAGGATCTAAAAGACTTGCAGAAGCAAAAGAAG CTGCATTTGAGAAACAGCCTCTGTTTATCCAGCAAGTGCTCGTGAACGTAGCCTCGCTATTCTCCGGATACCTACAGTAA
Upstream 100 bases:
>100_bases TTTTTAATAAAATCTTTAAAAAGGGCTCATATCTAATTAAAAGATGTGAGCTTTTTTTTTATCTTTTATAATAAAGAAAA GATTTTATAAGTTTATTATT
Downstream 100 bases:
>100_bases AATACAGTATCTTCTAAGAATAAAGACTGCTTCAAAAGCCTGTTCTGTATGGTGCAGAGCAGGTTTTTTTATGCTTAGAT GAGGTCAGTAGAACTCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 639; Mature: 639
Protein sequence:
>639_residues MVNPVGPIDESKNIAPADLSTLGMQASAANRSAEAESIAEVEGKNGSPRPSVNTLGRLSFLSSARNALINFFNKISALFT GKSVPKDFEEAKTQASNAQNALKTAKTFDEFKTALQQLQDAIKYMEQFAETDEQKTEVATLKAALAEKQPIIDTINKLGG ILEENEKLLEAIKTTSSIDQITGVAGQVEVNKAAAAALIEELKKLGVTADSYPVIGDTETKINTSSTEITKVAEAINSAY TAGKNSTTAVGQAQANNSPANIEASKNTIKEAKSTIDAALGLAPDSPIVKAAQKEQQKAVKDIDKIKPSGGSDVPIGGPG APGSVGTSQNRGTTVGEARISMLLADVDNETAAIIMQGFRNMIDNFHTQNPDITAPLEEVLAQVTDLTTQANPADAEATT QLQEIQQTLQEALQGISGEEGLTNALGAITTAASISTGAPIASANQGGSAVKQLYKTSSASASSKSYVDTLSAGYGAYQS LNDVYSRSSAANREVLDRTSTPALTRTVSRTETQPRDNDTAAQRFARTIAGNSHTLGDVYASVNVLQTLLGVLQSNPQAN EDEIKQKLTSAITKAPQSGYPYVQLSNDATQKFIAKLEDEFARGSKRLAEAKEAAFEKQPLFIQQVLVNVASLFSGYLQ
Sequences:
>Translated_639_residues MVNPVGPIDESKNIAPADLSTLGMQASAANRSAEAESIAEVEGKNGSPRPSVNTLGRLSFLSSARNALINFFNKISALFT GKSVPKDFEEAKTQASNAQNALKTAKTFDEFKTALQQLQDAIKYMEQFAETDEQKTEVATLKAALAEKQPIIDTINKLGG ILEENEKLLEAIKTTSSIDQITGVAGQVEVNKAAAAALIEELKKLGVTADSYPVIGDTETKINTSSTEITKVAEAINSAY TAGKNSTTAVGQAQANNSPANIEASKNTIKEAKSTIDAALGLAPDSPIVKAAQKEQQKAVKDIDKIKPSGGSDVPIGGPG APGSVGTSQNRGTTVGEARISMLLADVDNETAAIIMQGFRNMIDNFHTQNPDITAPLEEVLAQVTDLTTQANPADAEATT QLQEIQQTLQEALQGISGEEGLTNALGAITTAASISTGAPIASANQGGSAVKQLYKTSSASASSKSYVDTLSAGYGAYQS LNDVYSRSSAANREVLDRTSTPALTRTVSRTETQPRDNDTAAQRFARTIAGNSHTLGDVYASVNVLQTLLGVLQSNPQAN EDEIKQKLTSAITKAPQSGYPYVQLSNDATQKFIAKLEDEFARGSKRLAEAKEAAFEKQPLFIQQVLVNVASLFSGYLQ >Mature_639_residues MVNPVGPIDESKNIAPADLSTLGMQASAANRSAEAESIAEVEGKNGSPRPSVNTLGRLSFLSSARNALINFFNKISALFT GKSVPKDFEEAKTQASNAQNALKTAKTFDEFKTALQQLQDAIKYMEQFAETDEQKTEVATLKAALAEKQPIIDTINKLGG ILEENEKLLEAIKTTSSIDQITGVAGQVEVNKAAAAALIEELKKLGVTADSYPVIGDTETKINTSSTEITKVAEAINSAY TAGKNSTTAVGQAQANNSPANIEASKNTIKEAKSTIDAALGLAPDSPIVKAAQKEQQKAVKDIDKIKPSGGSDVPIGGPG APGSVGTSQNRGTTVGEARISMLLADVDNETAAIIMQGFRNMIDNFHTQNPDITAPLEEVLAQVTDLTTQANPADAEATT QLQEIQQTLQEALQGISGEEGLTNALGAITTAASISTGAPIASANQGGSAVKQLYKTSSASASSKSYVDTLSAGYGAYQS LNDVYSRSSAANREVLDRTSTPALTRTVSRTETQPRDNDTAAQRFARTIAGNSHTLGDVYASVNVLQTLLGVLQSNPQAN EDEIKQKLTSAITKAPQSGYPYVQLSNDATQKFIAKLEDEFARGSKRLAEAKEAAFEKQPLFIQQVLVNVASLFSGYLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67384; Mature: 67384
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNPVGPIDESKNIAPADLSTLGMQASAANRSAEAESIAEVEGKNGSPRPSVNTLGRLSF CCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH LSSARNALINFFNKISALFTGKSVPKDFEEAKTQASNAQNALKTAKTFDEFKTALQQLQD HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIKYMEQFAETDEQKTEVATLKAALAEKQPIIDTINKLGGILEENEKLLEAIKTTSSIDQ HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ITGVAGQVEVNKAAAAALIEELKKLGVTADSYPVIGDTETKINTSSTEITKVAEAINSAY HHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH TAGKNSTTAVGQAQANNSPANIEASKNTIKEAKSTIDAALGLAPDSPIVKAAQKEQQKAV HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KDIDKIKPSGGSDVPIGGPGAPGSVGTSQNRGTTVGEARISMLLADVDNETAAIIMQGFR HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH NMIDNFHTQNPDITAPLEEVLAQVTDLTTQANPADAEATTQLQEIQQTLQEALQGISGEE HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC GLTNALGAITTAASISTGAPIASANQGGSAVKQLYKTSSASASSKSYVDTLSAGYGAYQS HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHH LNDVYSRSSAANREVLDRTSTPALTRTVSRTETQPRDNDTAAQRFARTIAGNSHTLGDVY HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHH ASVNVLQTLLGVLQSNPQANEDEIKQKLTSAITKAPQSGYPYVQLSNDATQKFIAKLEDE HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHH FARGSKRLAEAKEAAFEKQPLFIQQVLVNVASLFSGYLQ HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVNPVGPIDESKNIAPADLSTLGMQASAANRSAEAESIAEVEGKNGSPRPSVNTLGRLSF CCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH LSSARNALINFFNKISALFTGKSVPKDFEEAKTQASNAQNALKTAKTFDEFKTALQQLQD HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIKYMEQFAETDEQKTEVATLKAALAEKQPIIDTINKLGGILEENEKLLEAIKTTSSIDQ HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ITGVAGQVEVNKAAAAALIEELKKLGVTADSYPVIGDTETKINTSSTEITKVAEAINSAY HHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH TAGKNSTTAVGQAQANNSPANIEASKNTIKEAKSTIDAALGLAPDSPIVKAAQKEQQKAV HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KDIDKIKPSGGSDVPIGGPGAPGSVGTSQNRGTTVGEARISMLLADVDNETAAIIMQGFR HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH NMIDNFHTQNPDITAPLEEVLAQVTDLTTQANPADAEATTQLQEIQQTLQEALQGISGEE HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC GLTNALGAITTAASISTGAPIASANQGGSAVKQLYKTSSASASSKSYVDTLSAGYGAYQS HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHH LNDVYSRSSAANREVLDRTSTPALTRTVSRTETQPRDNDTAAQRFARTIAGNSHTLGDVY HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHH ASVNVLQTLLGVLQSNPQANEDEIKQKLTSAITKAPQSGYPYVQLSNDATQKFIAKLEDE HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHH FARGSKRLAEAKEAAFEKQPLFIQQVLVNVASLFSGYLQ HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA