| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184661
Identifier: 62184661
GI number: 62184661
Start: 20414
End: 21700
Strand: Direct
Name: 62184661
Synonym: CAB014
Alternate gene names: NA
Gene position: 20414-21700 (Clockwise)
Preceding gene: 62184660
Following gene: 62184662
Centisome position: 1.78
GC content: 41.72
Gene sequence:
>1287_bases ATGAAAAAATATATTTATCCGTGGTTGGTGTGCTTGACTCTATCGACAATAGTGTCTCAAGGGTTTGCCAATACACCTTC TAGCATGCAAAGAACGAACAATTCTCCAACATTGATGAGTTTGGAAGATGTGAAGGCATATTTAGATACTCGAGGTTTTG TAGAAACAAGAAAACGAGGAGGAGTCTTAAGATTAGCCGGGGATGTGCGTGCTAAGTGGATCCACGCTAGGGAAGATATA AAAACACCTCCTACGCAACCAGATAAGTATAAGCCCTTGCCAGTAAACCGCTATCGTAGCGAATTTAAGCTGTATGTAGA TTATAACGCGGATAAAACATGGCTAACATCAGAAATGAGTTGGGCAGCAATTGCCGGGGGAGAATCTTCAGCTGCCGGTA TGGATATAGATAGAGCCTTCTTGGGTTATCGTTTCTATCGAGATCCGCAAACGCATACTAACATCTTTACGGAAGTCGGA CGTTCTTCTTTAGGTAGCATTTTCGAATCAGAAGTGCAGTTTAATAGTAATTTTGATGGTGTTCATCTTTATGCAGCACG TCGCTTAAGCGAACGCTTTCCTTATAACGTGATTATTCACGGCGGGCCGTTCGTAGTTAATATGACGAAAAAACATTATG CCTGGGTTGTGGAAGGGATTGTTAATAAACTTCCAGGGAACTTCTCTGTAAAGTGTAGTGTGATAGATTGGAACTCCTTT TCTCCTACAGAAGCCCCAGACCCTGCAAAAACAGCAGCAGGACCTGTCGCTGCAAATCTGAAATATAAGTACTGCGTCTG GCAATGGTTAGTAGGAAAGTACTCTGATTTACCTTGGTTCCATGGAAAGACAAAACCTTTGTATGTGTATGGTGCCTATT TAATCAATACCTTAGCAAAAGCAACTGCAACAACCTTAAATGAAAAGCAAAACAAAGCTTGGTTTGTTGGAGGAACCTTG GGCAGACTAAGAAAAGCTGGAGATTGGTCAGCGACAATACGTTATGAATATGTCGAGGCGTTAGCAGTTCCTGAAATCGA TGTATCTGGTATTGGCCGAGGCAACCAGCTGAAGTATTGGTTTGCTCAAGCAATAGCTGGAAATTATGACCCTAAAGAAG CCAATGGATTTACAAATTATAAAGGGGCTTCTTATCTGTTTATGTATGGAATCACAGATTCTTTATCTTTCAGAGCTTAT GGGGCTTATTCCAGACCAGCGGATAGCCGCCTGGGGAGTGACTTCACCTATAGGAAATTCGATCTTGGGTTAATTTCCGC ATTTTAA
Upstream 100 bases:
>100_bases GTTTCCTCCTTTCTCATGTGCAACTGTTTCGTTAGGGTTGTCCAAGTAACCATTTTTCGATCTTCTTACATTGAATAATT AAATCGACGCTAAGGAAACT
Downstream 100 bases:
>100_bases TCGGATTTTTAATAAAATCTTTAAAAAGGGCTCATATCTAATTAAAAGATGTGAGCTTTTTTTTTATCTTTTATAATAAA GAAAAGATTTTATAAGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MKKYIYPWLVCLTLSTIVSQGFANTPSSMQRTNNSPTLMSLEDVKAYLDTRGFVETRKRGGVLRLAGDVRAKWIHAREDI KTPPTQPDKYKPLPVNRYRSEFKLYVDYNADKTWLTSEMSWAAIAGGESSAAGMDIDRAFLGYRFYRDPQTHTNIFTEVG RSSLGSIFESEVQFNSNFDGVHLYAARRLSERFPYNVIIHGGPFVVNMTKKHYAWVVEGIVNKLPGNFSVKCSVIDWNSF SPTEAPDPAKTAAGPVAANLKYKYCVWQWLVGKYSDLPWFHGKTKPLYVYGAYLINTLAKATATTLNEKQNKAWFVGGTL GRLRKAGDWSATIRYEYVEALAVPEIDVSGIGRGNQLKYWFAQAIAGNYDPKEANGFTNYKGASYLFMYGITDSLSFRAY GAYSRPADSRLGSDFTYRKFDLGLISAF
Sequences:
>Translated_428_residues MKKYIYPWLVCLTLSTIVSQGFANTPSSMQRTNNSPTLMSLEDVKAYLDTRGFVETRKRGGVLRLAGDVRAKWIHAREDI KTPPTQPDKYKPLPVNRYRSEFKLYVDYNADKTWLTSEMSWAAIAGGESSAAGMDIDRAFLGYRFYRDPQTHTNIFTEVG RSSLGSIFESEVQFNSNFDGVHLYAARRLSERFPYNVIIHGGPFVVNMTKKHYAWVVEGIVNKLPGNFSVKCSVIDWNSF SPTEAPDPAKTAAGPVAANLKYKYCVWQWLVGKYSDLPWFHGKTKPLYVYGAYLINTLAKATATTLNEKQNKAWFVGGTL GRLRKAGDWSATIRYEYVEALAVPEIDVSGIGRGNQLKYWFAQAIAGNYDPKEANGFTNYKGASYLFMYGITDSLSFRAY GAYSRPADSRLGSDFTYRKFDLGLISAF >Mature_428_residues MKKYIYPWLVCLTLSTIVSQGFANTPSSMQRTNNSPTLMSLEDVKAYLDTRGFVETRKRGGVLRLAGDVRAKWIHAREDI KTPPTQPDKYKPLPVNRYRSEFKLYVDYNADKTWLTSEMSWAAIAGGESSAAGMDIDRAFLGYRFYRDPQTHTNIFTEVG RSSLGSIFESEVQFNSNFDGVHLYAARRLSERFPYNVIIHGGPFVVNMTKKHYAWVVEGIVNKLPGNFSVKCSVIDWNSF SPTEAPDPAKTAAGPVAANLKYKYCVWQWLVGKYSDLPWFHGKTKPLYVYGAYLINTLAKATATTLNEKQNKAWFVGGTL GRLRKAGDWSATIRYEYVEALAVPEIDVSGIGRGNQLKYWFAQAIAGNYDPKEANGFTNYKGASYLFMYGITDSLSFRAY GAYSRPADSRLGSDFTYRKFDLGLISAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48237; Mature: 48237
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYIYPWLVCLTLSTIVSQGFANTPSSMQRTNNSPTLMSLEDVKAYLDTRGFVETRKRG CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEHHHHHHHHHCCCHHHHHHCC GVLRLAGDVRAKWIHAREDIKTPPTQPDKYKPLPVNRYRSEFKLYVDYNADKTWLTSEMS CEEEEECCCCEEEEECHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCC WAAIAGGESSAAGMDIDRAFLGYRFYRDPQTHTNIFTEVGRSSLGSIFESEVQFNSNFDG EEEEECCCCCCCCCCHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VHLYAARRLSERFPYNVIIHGGPFVVNMTKKHYAWVVEGIVNKLPGNFSVKCSVIDWNSF EEHHHHHHHHHHCCEEEEEECCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC SPTEAPDPAKTAAGPVAANLKYKYCVWQWLVGKYSDLPWFHGKTKPLYVYGAYLINTLAK CCCCCCCCCHHCCCCEEECCEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHH ATATTLNEKQNKAWFVGGTLGRLRKAGDWSATIRYEYVEALAVPEIDVSGIGRGNQLKYW HHHHHHCCCCCCEEEEECCHHHHHCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCHHH FAQAIAGNYDPKEANGFTNYKGASYLFMYGITDSLSFRAYGAYSRPADSRLGSDFTYRKF HHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHCCCCCCEEEE DLGLISAF CCEEEECC >Mature Secondary Structure MKKYIYPWLVCLTLSTIVSQGFANTPSSMQRTNNSPTLMSLEDVKAYLDTRGFVETRKRG CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEHHHHHHHHHCCCHHHHHHCC GVLRLAGDVRAKWIHAREDIKTPPTQPDKYKPLPVNRYRSEFKLYVDYNADKTWLTSEMS CEEEEECCCCEEEEECHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCC WAAIAGGESSAAGMDIDRAFLGYRFYRDPQTHTNIFTEVGRSSLGSIFESEVQFNSNFDG EEEEECCCCCCCCCCHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VHLYAARRLSERFPYNVIIHGGPFVVNMTKKHYAWVVEGIVNKLPGNFSVKCSVIDWNSF EEHHHHHHHHHHCCEEEEEECCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC SPTEAPDPAKTAAGPVAANLKYKYCVWQWLVGKYSDLPWFHGKTKPLYVYGAYLINTLAK CCCCCCCCCHHCCCCEEECCEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHH ATATTLNEKQNKAWFVGGTLGRLRKAGDWSATIRYEYVEALAVPEIDVSGIGRGNQLKYW HHHHHHCCCCCCEEEEECCHHHHHCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCHHH FAQAIAGNYDPKEANGFTNYKGASYLFMYGITDSLSFRAYGAYSRPADSRLGSDFTYRKF HHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHCCCCCCEEEE DLGLISAF CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA