| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59714282
Identifier: 59714282
GI number: 59714282
Start: 1240134
End: 1242011
Strand: Reverse
Name: 59714282
Synonym: VF_A1099
Alternate gene names: NA
Gene position: 1242011-1240134 (Counterclockwise)
Preceding gene: 59714283
Following gene: 59714281
Centisome position: 93.36
GC content: 39.03
Gene sequence:
>1878_bases ATGAATAAATCTATTATTGTATTAACTACTTTGGTCTCTTTAGTTAGTTGTAAGAATGGGGATACGGATCTTATGCCTAG TCGGCCTACGGATCCGACATCAAACCATGCCCCTCAAGTTCTTGATGAACAGATTATTGGTAATATTGCAGATAAACAGT TGGAGCTGACTGGAACGTATTACGATGAAGAAGGAGACGAGCCTGATGTTGAACAGTTTACTTTTCGTTGGTTAAAAGAT GGTGTCGAGATTCCTGATGCTGATGATTATATCTTGCCTGTTTCGGATGCAAGTGCGTTGTTAGGTGTAACGGTATCTGG ATGTGTTACTCCATCAGCAAAAACAGGTGAATTAGTTGGTGACGAATATTGTACAGATTTAAGTATTGGGCTTTCATCAG ATATTTCAGCTGAAGTTACGATAGATTCGTCAGTTTTTCCTCTACCTGGAAATACCATAAGTGCTTCTTATACCTATGAT GATAATGGTGCAGGTATCCCCGAAGGTAAAAGTATATTTGGTTTTGTTACTCATACTTTGGGCGATGATCATATGCCAGA GTTTACTCAATGTGAATCCGGTGCTGGTAAGGATTGTATGTATGATATTAACCGCCGTTATATTGATAAAACCATTCGAG CTTGTGTTCTCCCAATTGGGGAGGGTACTCAAGTTGGTCCACTTAACTGCGATTCAACAAAAGGAATTGGCACTAAAATT ACTGGCTCATTGGAATATGGTGCCACGTTAACCGCGAAAATATATGGACTAACTGGTGATACAAAATGGAAAGCCAATTT AAGCGCACAAGATGGTTGGACAAACGATAAAGCAGAAGACAGAGTTGAGATTACTGAAGGAGAAGGTGGTGTAGGTACTA ACTTATCTTACACCATAGGTACTCGAGATAAAGCTGTGGAATTAGTTCCGGGCTTAATGGATATGGGGAGCAGTAGAGAT CAACAAGTGAGTCTTGATAAGCAACTTGATGATTGGGATTGGCTTGTTGCTGAAGCAAATGGAGATCCTCTACCTAAAGA TGCTACGTATTTTATTGGTAAAGACATCAGTTTTTGTATTGATAGTACTGAACTCGGGTATGAATATTGTGTTAATGCTT CAGAAGCGACACCTCTTTCGGCAAAAGGGGACGCTGAGATATGTACAGATGATACTGAGTGCGTCACAGGTGGTGCATAT TATCCCGAAACACCAGATAAACCATTATTTTACTCTCGAGGTATAGAGCCGATACGTGAAATCTTGATCCCTGGGTCGGC AGAAGGACGTTATTTAGATTCTTTGGGTGGTACAAGAGATGACTCTTATTACCATAGGCCATTAACAATAACAGAAGCAA AAAATGCGCAAAAACTGAAATTTAGTGAAGGTGAGTTTCCTGCTCCTTCGAATGATAATCCTTTAGCCGTGTTTGGTTAT AAATGGTCAGTGTATGAGCACAGTACAGAAGCTCAATCATGTAACTTGCTTAATAGTGATACTAAACATTGGTATTTGGC CGTTCCAGGACTCGATGTTTTAAGTGAAGGTTCTGAAGTTGATTCTTTAGATCAAGAAGGAATGTTAGAGCTAGCGTCAT CTAAATATAGTCTTGCTGCATTGAATCGTTCAGTTTTAGGTATGAAGAGAGCTGAATCTGGAACGTATAAAGACCCTGAT ATTGTTCCGTATTACTCATTTACAACAGGTTGGATAACGGCTGTTAATAATCACCATGCGTCTAATGCGAGTTTTACCTC TTCTTATATAGGTGATTTTAGTTTTGTTCTTTCGGACGTCATTTTTGAAGAAGAAAGAGAAGTTTCATTTTTTTACCCAT ATAGTGAATTTATTAATCCATTATGTGTCGGGCAATGA
Upstream 100 bases:
>100_bases GGCTCAGCAGACCCGCTTGTAAATGAAGACCTTATGCGAAATGAATCGGCTCTGAATCGTCGAGTTGTTATTCAGTTTAA TCGTAGGGTTGGGTCTTAAT
Downstream 100 bases:
>100_bases TTTTATAATTAAATGAGTTTTCATTTGATTATATAACACTGTGTTTAAATTATTGAACGCAGTACTTTAAATAGATAAGG ATTAAATAACTTTATCTAAA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MNKSIIVLTTLVSLVSCKNGDTDLMPSRPTDPTSNHAPQVLDEQIIGNIADKQLELTGTYYDEEGDEPDVEQFTFRWLKD GVEIPDADDYILPVSDASALLGVTVSGCVTPSAKTGELVGDEYCTDLSIGLSSDISAEVTIDSSVFPLPGNTISASYTYD DNGAGIPEGKSIFGFVTHTLGDDHMPEFTQCESGAGKDCMYDINRRYIDKTIRACVLPIGEGTQVGPLNCDSTKGIGTKI TGSLEYGATLTAKIYGLTGDTKWKANLSAQDGWTNDKAEDRVEITEGEGGVGTNLSYTIGTRDKAVELVPGLMDMGSSRD QQVSLDKQLDDWDWLVAEANGDPLPKDATYFIGKDISFCIDSTELGYEYCVNASEATPLSAKGDAEICTDDTECVTGGAY YPETPDKPLFYSRGIEPIREILIPGSAEGRYLDSLGGTRDDSYYHRPLTITEAKNAQKLKFSEGEFPAPSNDNPLAVFGY KWSVYEHSTEAQSCNLLNSDTKHWYLAVPGLDVLSEGSEVDSLDQEGMLELASSKYSLAALNRSVLGMKRAESGTYKDPD IVPYYSFTTGWITAVNNHHASNASFTSSYIGDFSFVLSDVIFEEEREVSFFYPYSEFINPLCVGQ
Sequences:
>Translated_625_residues MNKSIIVLTTLVSLVSCKNGDTDLMPSRPTDPTSNHAPQVLDEQIIGNIADKQLELTGTYYDEEGDEPDVEQFTFRWLKD GVEIPDADDYILPVSDASALLGVTVSGCVTPSAKTGELVGDEYCTDLSIGLSSDISAEVTIDSSVFPLPGNTISASYTYD DNGAGIPEGKSIFGFVTHTLGDDHMPEFTQCESGAGKDCMYDINRRYIDKTIRACVLPIGEGTQVGPLNCDSTKGIGTKI TGSLEYGATLTAKIYGLTGDTKWKANLSAQDGWTNDKAEDRVEITEGEGGVGTNLSYTIGTRDKAVELVPGLMDMGSSRD QQVSLDKQLDDWDWLVAEANGDPLPKDATYFIGKDISFCIDSTELGYEYCVNASEATPLSAKGDAEICTDDTECVTGGAY YPETPDKPLFYSRGIEPIREILIPGSAEGRYLDSLGGTRDDSYYHRPLTITEAKNAQKLKFSEGEFPAPSNDNPLAVFGY KWSVYEHSTEAQSCNLLNSDTKHWYLAVPGLDVLSEGSEVDSLDQEGMLELASSKYSLAALNRSVLGMKRAESGTYKDPD IVPYYSFTTGWITAVNNHHASNASFTSSYIGDFSFVLSDVIFEEEREVSFFYPYSEFINPLCVGQ >Mature_625_residues MNKSIIVLTTLVSLVSCKNGDTDLMPSRPTDPTSNHAPQVLDEQIIGNIADKQLELTGTYYDEEGDEPDVEQFTFRWLKD GVEIPDADDYILPVSDASALLGVTVSGCVTPSAKTGELVGDEYCTDLSIGLSSDISAEVTIDSSVFPLPGNTISASYTYD DNGAGIPEGKSIFGFVTHTLGDDHMPEFTQCESGAGKDCMYDINRRYIDKTIRACVLPIGEGTQVGPLNCDSTKGIGTKI TGSLEYGATLTAKIYGLTGDTKWKANLSAQDGWTNDKAEDRVEITEGEGGVGTNLSYTIGTRDKAVELVPGLMDMGSSRD QQVSLDKQLDDWDWLVAEANGDPLPKDATYFIGKDISFCIDSTELGYEYCVNASEATPLSAKGDAEICTDDTECVTGGAY YPETPDKPLFYSRGIEPIREILIPGSAEGRYLDSLGGTRDDSYYHRPLTITEAKNAQKLKFSEGEFPAPSNDNPLAVFGY KWSVYEHSTEAQSCNLLNSDTKHWYLAVPGLDVLSEGSEVDSLDQEGMLELASSKYSLAALNRSVLGMKRAESGTYKDPD IVPYYSFTTGWITAVNNHHASNASFTSSYIGDFSFVLSDVIFEEEREVSFFYPYSEFINPLCVGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68002; Mature: 68002
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSIIVLTTLVSLVSCKNGDTDLMPSRPTDPTSNHAPQVLDEQIIGNIADKQLELTGTY CCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEE YDEEGDEPDVEQFTFRWLKDGVEIPDADDYILPVSDASALLGVTVSGCVTPSAKTGELVG ECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEEECEECCCCCCCCCCC DEYCTDLSIGLSSDISAEVTIDSSVFPLPGNTISASYTYDDNGAGIPEGKSIFGFVTHTL CHHHCEEECCCCCCCEEEEEECCCEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECC GDDHMPEFTQCESGAGKDCMYDINRRYIDKTIRACVLPIGEGTQVGPLNCDSTKGIGTKI CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEECCCCCCCCCCCCEEE TGSLEYGATLTAKIYGLTGDTKWKANLSAQDGWTNDKAEDRVEITEGEGGVGTNLSYTIG EECEECCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEC TRDKAVELVPGLMDMGSSRDQQVSLDKQLDDWDWLVAEANGDPLPKDATYFIGKDISFCI CCCCHHHHHCCHHHCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCEEEECCCEEEEE DSTELGYEYCVNASEATPLSAKGDAEICTDDTECVTGGAYYPETPDKPLFYSRGIEPIRE CCCCCCHHHCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCHHHCCHHHHHH ILIPGSAEGRYLDSLGGTRDDSYYHRPLTITEAKNAQKLKFSEGEFPAPSNDNPLAVFGY HCCCCCCCCCCHHHCCCCCCCCEEECCEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEE KWSVYEHSTEAQSCNLLNSDTKHWYLAVPGLDVLSEGSEVDSLDQEGMLELASSKYSLAA EEEEEECCCCHHHCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCHHHHHHHHCCCHHHHH LNRSVLGMKRAESGTYKDPDIVPYYSFTTGWITAVNNHHASNASFTSSYIGDFSFVLSDV HHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH IFEEEREVSFFYPYSEFINPLCVGQ HHCCCCCEEEEECHHHHCCCCCCCC >Mature Secondary Structure MNKSIIVLTTLVSLVSCKNGDTDLMPSRPTDPTSNHAPQVLDEQIIGNIADKQLELTGTY CCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEE YDEEGDEPDVEQFTFRWLKDGVEIPDADDYILPVSDASALLGVTVSGCVTPSAKTGELVG ECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEEECEECCCCCCCCCCC DEYCTDLSIGLSSDISAEVTIDSSVFPLPGNTISASYTYDDNGAGIPEGKSIFGFVTHTL CHHHCEEECCCCCCCEEEEEECCCEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECC GDDHMPEFTQCESGAGKDCMYDINRRYIDKTIRACVLPIGEGTQVGPLNCDSTKGIGTKI CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEECCCCCCCCCCCCEEE TGSLEYGATLTAKIYGLTGDTKWKANLSAQDGWTNDKAEDRVEITEGEGGVGTNLSYTIG EECEECCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEC TRDKAVELVPGLMDMGSSRDQQVSLDKQLDDWDWLVAEANGDPLPKDATYFIGKDISFCI CCCCHHHHHCCHHHCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCEEEECCCEEEEE DSTELGYEYCVNASEATPLSAKGDAEICTDDTECVTGGAYYPETPDKPLFYSRGIEPIRE CCCCCCHHHCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCHHHCCHHHHHH ILIPGSAEGRYLDSLGGTRDDSYYHRPLTITEAKNAQKLKFSEGEFPAPSNDNPLAVFGY HCCCCCCCCCCHHHCCCCCCCCEEECCEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEE KWSVYEHSTEAQSCNLLNSDTKHWYLAVPGLDVLSEGSEVDSLDQEGMLELASSKYSLAA EEEEEECCCCHHHCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCHHHHHHHHCCCHHHHH LNRSVLGMKRAESGTYKDPDIVPYYSFTTGWITAVNNHHASNASFTSSYIGDFSFVLSDV HHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH IFEEEREVSFFYPYSEFINPLCVGQ HHCCCCCEEEEECHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA