Definition Vibrio fischeri ES114 chromosome chromosome II, complete sequence.
Accession NC_006841
Length 1,330,333

Click here to switch to the map view.

The map label for this gene is 59714281

Identifier: 59714281

GI number: 59714281

Start: 1238792

End: 1239994

Strand: Reverse

Name: 59714281

Synonym: VF_A1098

Alternate gene names: NA

Gene position: 1239994-1238792 (Counterclockwise)

Preceding gene: 59714282

Following gene: 59714280

Centisome position: 93.21

GC content: 36.16

Gene sequence:

>1203_bases
ATGTATTTTAAATTAAACCAGTTGGCAATGGTATCTTTATTAACTGTTGGTGTTGTTGGTACAGCATCTGCAAATGTATA
TATTGATCATAACGATGAAGGTATACGTGAAAATAGTATTTTGGTTGTTAAATCTGATCTAAATAAAGATGAGATTAAAA
ATCCAAAATTTGTATGGAAGGATGAAAAAGGCACAATTGTTGGTCTTGGTAAGAAATTGATTGTTACTCCTGATATTTTA
GGTAATAGCCAAAATCTAACAGCATGTATTTCATATATTAATCAAGACGATCTTACATCTTCTATTCAATGTTCTAATGA
AATGTCATTAAACAGCGTTCAAACATTGGATGCCTTTGCACCACGTATCAATGAAAAAGAAGTTTCTGACGTATTGGTTG
GAAAATTCATTGCAGCAACAGAAGTCGTGAATCTTTCTTATAGTGTTTATAATAAGGGGGAAACAACTCCGATTGATGAA
AGTGAAATTACTGCTGCCACTTATCAATGGCGAATTGATGGGGCGTTAGTAAAAACAGTAACTAGCCCATCAAATAAACA
ATTTTTAGTGCCTGAAACTTTTGATAACGATGAAGATCCAGATACAGCTGAAGTTCCAGTAGAAGCAGGAATGCCACTTA
CGGTATCGATCTCTGTTACCTTATCTTCTGAAGCAGGCGGTGGTTCTGGTATTGGTGGTGATAACTTCACAATACAAGAA
AACTTCCCTGGTGGTAATGTTGCTGATAACTATTATCGTCCAATGTTGTCAATTGAAACCGATTATGATGAAGGTGATGA
AGCTACAGAATCAGAATTTATTGTTCGTACTGATGGAAACGGTGTAGCAACAGATGAAATGACAGGCGATGATGTATATG
GCTTTGCTGCATTACCTCAAGATATTGCTGCACAAGAGTGTACTAACCGTGGTTTAAGATTAGTATCAAATCCAACTGCA
TTTTCTAGTTACTTAACGGTTGAAACAGCAGGAGGTAAAACTGAACACTGGCCATACGATGTTCGTATGTTGTGGAGTTC
AGAAAAAGATGCAACAGAACCGGGTAGTTACTTTAATTACTATAATGCAGTAGGTTATATCTACAACACGCCAAGTGATA
GTACTGGTGGCGGCGAATTTAAAGTTGTTGGACAAGATCCTGCTTCATTAGCATTAGTAGTGTGTGAAGATATCCCTAAA
TAA

Upstream 100 bases:

>100_bases
TGTGTTTAAATTATTGAACGCAGTACTTTAAATAGATAAGGATTAAATAACTTTATCTAAATTATAAATAATAGCCACGT
ATAGTGGTTGGAGTATAAAT

Downstream 100 bases:

>100_bases
ATAACAATATAAAATAATAATAAAGCCTCTTTTATTAGAGGCTTTTATCTGTTCGGAATAAATATAATGAAATATAAATA
TTGGGTAGGGATGACTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MYFKLNQLAMVSLLTVGVVGTASANVYIDHNDEGIRENSILVVKSDLNKDEIKNPKFVWKDEKGTIVGLGKKLIVTPDIL
GNSQNLTACISYINQDDLTSSIQCSNEMSLNSVQTLDAFAPRINEKEVSDVLVGKFIAATEVVNLSYSVYNKGETTPIDE
SEITAATYQWRIDGALVKTVTSPSNKQFLVPETFDNDEDPDTAEVPVEAGMPLTVSISVTLSSEAGGGSGIGGDNFTIQE
NFPGGNVADNYYRPMLSIETDYDEGDEATESEFIVRTDGNGVATDEMTGDDVYGFAALPQDIAAQECTNRGLRLVSNPTA
FSSYLTVETAGGKTEHWPYDVRMLWSSEKDATEPGSYFNYYNAVGYIYNTPSDSTGGGEFKVVGQDPASLALVVCEDIPK

Sequences:

>Translated_400_residues
MYFKLNQLAMVSLLTVGVVGTASANVYIDHNDEGIRENSILVVKSDLNKDEIKNPKFVWKDEKGTIVGLGKKLIVTPDIL
GNSQNLTACISYINQDDLTSSIQCSNEMSLNSVQTLDAFAPRINEKEVSDVLVGKFIAATEVVNLSYSVYNKGETTPIDE
SEITAATYQWRIDGALVKTVTSPSNKQFLVPETFDNDEDPDTAEVPVEAGMPLTVSISVTLSSEAGGGSGIGGDNFTIQE
NFPGGNVADNYYRPMLSIETDYDEGDEATESEFIVRTDGNGVATDEMTGDDVYGFAALPQDIAAQECTNRGLRLVSNPTA
FSSYLTVETAGGKTEHWPYDVRMLWSSEKDATEPGSYFNYYNAVGYIYNTPSDSTGGGEFKVVGQDPASLALVVCEDIPK
>Mature_400_residues
MYFKLNQLAMVSLLTVGVVGTASANVYIDHNDEGIRENSILVVKSDLNKDEIKNPKFVWKDEKGTIVGLGKKLIVTPDIL
GNSQNLTACISYINQDDLTSSIQCSNEMSLNSVQTLDAFAPRINEKEVSDVLVGKFIAATEVVNLSYSVYNKGETTPIDE
SEITAATYQWRIDGALVKTVTSPSNKQFLVPETFDNDEDPDTAEVPVEAGMPLTVSISVTLSSEAGGGSGIGGDNFTIQE
NFPGGNVADNYYRPMLSIETDYDEGDEATESEFIVRTDGNGVATDEMTGDDVYGFAALPQDIAAQECTNRGLRLVSNPTA
FSSYLTVETAGGKTEHWPYDVRMLWSSEKDATEPGSYFNYYNAVGYIYNTPSDSTGGGEFKVVGQDPASLALVVCEDIPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43315; Mature: 43315

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFKLNQLAMVSLLTVGVVGTASANVYIDHNDEGIRENSILVVKSDLNKDEIKNPKFVWK
CEEEEHHHHHHHHHHHHEEEECCEEEEEECCCCCCCCCCEEEEECCCCHHHCCCCCEEEE
DEKGTIVGLGKKLIVTPDILGNSQNLTACISYINQDDLTSSIQCSNEMSLNSVQTLDAFA
CCCCCEEECCCEEEEECHHCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHC
PRINEKEVSDVLVGKFIAATEVVNLSYSVYNKGETTPIDESEITAATYQWRIDGALVKTV
CCCCHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCEEEEEE
TSPSNKQFLVPETFDNDEDPDTAEVPVEAGMPLTVSISVTLSSEAGGGSGIGGDNFTIQE
ECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEE
NFPGGNVADNYYRPMLSIETDYDEGDEATESEFIVRTDGNGVATDEMTGDDVYGFAALPQ
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEECCCCCCCCEEEEECCCH
DIAAQECTNRGLRLVSNPTAFSSYLTVETAGGKTEHWPYDVRMLWSSEKDATEPGSYFNY
HHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHHH
YNAVGYIYNTPSDSTGGGEFKVVGQDPASLALVVCEDIPK
CCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCC
>Mature Secondary Structure
MYFKLNQLAMVSLLTVGVVGTASANVYIDHNDEGIRENSILVVKSDLNKDEIKNPKFVWK
CEEEEHHHHHHHHHHHHEEEECCEEEEEECCCCCCCCCCEEEEECCCCHHHCCCCCEEEE
DEKGTIVGLGKKLIVTPDILGNSQNLTACISYINQDDLTSSIQCSNEMSLNSVQTLDAFA
CCCCCEEECCCEEEEECHHCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHC
PRINEKEVSDVLVGKFIAATEVVNLSYSVYNKGETTPIDESEITAATYQWRIDGALVKTV
CCCCHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCEEEEEE
TSPSNKQFLVPETFDNDEDPDTAEVPVEAGMPLTVSISVTLSSEAGGGSGIGGDNFTIQE
ECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEE
NFPGGNVADNYYRPMLSIETDYDEGDEATESEFIVRTDGNGVATDEMTGDDVYGFAALPQ
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEECCCCCCCCEEEEECCCH
DIAAQECTNRGLRLVSNPTAFSSYLTVETAGGKTEHWPYDVRMLWSSEKDATEPGSYFNY
HHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHHH
YNAVGYIYNTPSDSTGGGEFKVVGQDPASLALVVCEDIPK
CCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA