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The map label for this gene is ompA [H]

Identifier: 59714283

GI number: 59714283

Start: 1242013

End: 1242987

Strand: Reverse

Name: ompA [H]

Synonym: VF_A1100

Alternate gene names: 59714283

Gene position: 1242987-1242013 (Counterclockwise)

Preceding gene: 59714284

Following gene: 59714282

Centisome position: 93.43

GC content: 40.51

Gene sequence:

>975_bases
ATGTTAATTATCTCTAATGGAACTATAGCTTCTGAATCAAAAGAAGAACAATCTCATGTGTATTTAGGTGGGCAGGTTGG
CGTTAGTCACTTTTTAGGTGCGTGCTCATCAAATGCAATCGAGTGTAAAAATTATGTCACTGGTGGTGGTCTTTATGGTG
GTTATCAGTTTAATTCTTGGTTTGCCTTAGAAGGTAGCTGGCATGATTACGGAAGCCCTAAGACTTTTTATGGGGTTGGT
GATGGTTATTATTCAAATGCTACGGGTGTTGACTTATCTGTGAAGTTATCACTACCGGTTACCGATAATCTTGATTTGTA
TGCGAAAGGTGGTGCCGCTTATAACTATTTATCTGTTTCGGGCAACGATAATGTGCATCTTGGCATGTTTGAATCCGATT
CTAGCATAGACGATATTTGGGAAATTGGTGCTGAATATGCGCTTGCTCCAAATTGGAGCTTGCGATTTGGAACCTCAATT
ATTGACGGTATAGGTAATGCTAAAACTGGTAAAAGTGACCTCTACTTCACCTCTCTTGGTTTGACTTATAAATTTAAAGC
AAAACCAGAGCCAGAACTTAAGCCTGAAACGATTGTAAAGCTGGTCCCTGAAGCAACCTATTATCCAGAGCAAGTTACGC
TTCATTTTGAATTTGGGGAAAGCCGTTTTGTTGTTGAAAGTAAGCAATGGCACTCATGGAATGAACTGGCGTTAAGCGTT
AAGCAGGGACAAGGGAAAGTAAGCATCACAGGTTACACCGACGCAAAAGGAACGGATTCAGCAAATGATATCGAATCTTT
ACGAAGAGCAACTTACGCTGCAGATATGCTGATTAAAGCTGGTGTGGATGAAGAAAGAATTCTCATTAACTCTAAAGGCT
CAGCAGACCCGCTTGTAAATGAAGACCTTATGCGAAATGAATCGGCTCTGAATCGTCGAGTTGTTATTCAGTTTAATCGT
AGGGTTGGGTCTTAA

Upstream 100 bases:

>100_bases
TTTTAAATTTGGCTAGTTATAAAGGTAAAGTAAAGTGATAAAACATAAAATTTATAACGATAATTACATAATAAAAATAA
AAGCCTTACTATTGGCAATA

Downstream 100 bases:

>100_bases
TATGAATAAATCTATTATTGTATTAACTACTTTGGTCTCTTTAGTTAGTTGTAAGAATGGGGATACGGATCTTATGCCTA
GTCGGCCTACGGATCCGACA

Product: outer membrane protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MLIISNGTIASESKEEQSHVYLGGQVGVSHFLGACSSNAIECKNYVTGGGLYGGYQFNSWFALEGSWHDYGSPKTFYGVG
DGYYSNATGVDLSVKLSLPVTDNLDLYAKGGAAYNYLSVSGNDNVHLGMFESDSSIDDIWEIGAEYALAPNWSLRFGTSI
IDGIGNAKTGKSDLYFTSLGLTYKFKAKPEPELKPETIVKLVPEATYYPEQVTLHFEFGESRFVVESKQWHSWNELALSV
KQGQGKVSITGYTDAKGTDSANDIESLRRATYAADMLIKAGVDEERILINSKGSADPLVNEDLMRNESALNRRVVIQFNR
RVGS

Sequences:

>Translated_324_residues
MLIISNGTIASESKEEQSHVYLGGQVGVSHFLGACSSNAIECKNYVTGGGLYGGYQFNSWFALEGSWHDYGSPKTFYGVG
DGYYSNATGVDLSVKLSLPVTDNLDLYAKGGAAYNYLSVSGNDNVHLGMFESDSSIDDIWEIGAEYALAPNWSLRFGTSI
IDGIGNAKTGKSDLYFTSLGLTYKFKAKPEPELKPETIVKLVPEATYYPEQVTLHFEFGESRFVVESKQWHSWNELALSV
KQGQGKVSITGYTDAKGTDSANDIESLRRATYAADMLIKAGVDEERILINSKGSADPLVNEDLMRNESALNRRVVIQFNR
RVGS
>Mature_324_residues
MLIISNGTIASESKEEQSHVYLGGQVGVSHFLGACSSNAIECKNYVTGGGLYGGYQFNSWFALEGSWHDYGSPKTFYGVG
DGYYSNATGVDLSVKLSLPVTDNLDLYAKGGAAYNYLSVSGNDNVHLGMFESDSSIDDIWEIGAEYALAPNWSLRFGTSI
IDGIGNAKTGKSDLYFTSLGLTYKFKAKPEPELKPETIVKLVPEATYYPEQVTLHFEFGESRFVVESKQWHSWNELALSV
KQGQGKVSITGYTDAKGTDSANDIESLRRATYAADMLIKAGVDEERILINSKGSADPLVNEDLMRNESALNRRVVIQFNR
RVGS

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=326, Percent_Identity=27.3006134969325, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 35466; Mature: 35466

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIISNGTIASESKEEQSHVYLGGQVGVSHFLGACSSNAIECKNYVTGGGLYGGYQFNSW
CEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCEEECEEEECCCCCCCEEECEE
FALEGSWHDYGSPKTFYGVGDGYYSNATGVDLSVKLSLPVTDNLDLYAKGGAAYNYLSVS
EEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEEEEC
GNDNVHLGMFESDSSIDDIWEIGAEYALAPNWSLRFGTSIIDGIGNAKTGKSDLYFTSLG
CCCCEEEEEECCCCCHHHHHHCCCCEEECCCCCEEECCHHHHCCCCCCCCCCCEEEEEEC
LTYKFKAKPEPELKPETIVKLVPEATYYPEQVTLHFEFGESRFVVESKQWHSWNELALSV
EEEEECCCCCCCCCHHHHHEECCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCEEEEE
KQGQGKVSITGYTDAKGTDSANDIESLRRATYAADMLIKAGVDEERILINSKGSADPLVN
ECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
EDLMRNESALNRRVVIQFNRRVGS
HHHHCCHHHCCCEEEEEECCCCCC
>Mature Secondary Structure
MLIISNGTIASESKEEQSHVYLGGQVGVSHFLGACSSNAIECKNYVTGGGLYGGYQFNSW
CEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCEEECEEEECCCCCCCEEECEE
FALEGSWHDYGSPKTFYGVGDGYYSNATGVDLSVKLSLPVTDNLDLYAKGGAAYNYLSVS
EEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEEEEC
GNDNVHLGMFESDSSIDDIWEIGAEYALAPNWSLRFGTSIIDGIGNAKTGKSDLYFTSLG
CCCCEEEEEECCCCCHHHHHHCCCCEEECCCCCEEECCHHHHCCCCCCCCCCCEEEEEEC
LTYKFKAKPEPELKPETIVKLVPEATYYPEQVTLHFEFGESRFVVESKQWHSWNELALSV
EEEEECCCCCCCCCHHHHHEECCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCEEEEE
KQGQGKVSITGYTDAKGTDSANDIESLRRATYAADMLIKAGVDEERILINSKGSADPLVN
ECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
EDLMRNESALNRRVVIQFNRRVGS
HHHHCCHHHCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6092858 [H]