| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is aslB [H]
Identifier: 59714176
GI number: 59714176
Start: 1115718
End: 1116950
Strand: Reverse
Name: aslB [H]
Synonym: VF_A0993
Alternate gene names: 59714176
Gene position: 1116950-1115718 (Counterclockwise)
Preceding gene: 59714179
Following gene: 59714175
Centisome position: 83.96
GC content: 38.04
Gene sequence:
>1233_bases ATGGCTTCTAATGCACAATATGCTGCTTTTCATATGATGGCAAAATCAACCAGTTTTCATTGCAACTTAAAATGCGATTA CTGTTTCTACTTAGAAAAAGATGGTGTGGTGAATAAGACGACATCTGAGCCAAGTGAAAATATGTCTAATGGAATGTTAA AGTGTTATGTGCGTGATTATATCCGCTCACATCAAGGGCAAGAGGTTGATTTCTCTTGGCAGGGTGGGGAGCCAACATTA GCTGGCTTAGATTTTTATCGAAATGCAGTGAAATATCAGCAGCAGTATGCTGAAGGTAAAATTGTCACCAATAGCTTTCA AACTAATGCCGTAGCCATTAATCGTCAATGGGCAGAGTTCTTTTCTCAACACAATTTTCTGCTTGGTGTTTCTATTGATG GCATTGCTGAGGTTCATGATAAATATCGTATTTCAGTTAATGGTAAACCAACGTTTGAAAGAGTTAAGCGATCACTTGAA TTATTGAAAGAGTACAAGGTTGAGTTTAATACATTAACGGTGATCAACGATCAAAATTGGCAACGTGGTAAAGAAACGTA TCAAGCATTAAAAGAGTTAGGTTCAACTCATATGCAATTTATTCCAATTGTTGAAGTTAATGCGAATTGTCAGCAATCAA CAAATGGACATTATTCTCCTTCACAAGATGCAGAGTTAACCCATTTTAGTGTGCCTGCTGATGGTTATGGGCAGTTTATG ATAGCTGTGTTTAATCAGTGGGTTAAAGAGGATGTCGGCCAGGTTTTTGTTCGTATTTTCGATAGTATTTTAGGCAGTTG GATGGGATACCCAGCTTCTACTTGTGTGCAATCAAAAGAGTGTGGGCAAGCCATGGTAATAGAAGCAAATGGTGATGTTT ATTCTTGTGATCATTATGTTTATCCGGCAAATAAATTAGGAAATATTGAACAAACGTCATTAGCTCAAATGGCTACAAGT AAACAACAGAAGCGTTTTGGCTCAGCGAAATCCCTTAAGTTAACTGGCCAATGTGAAGCATGTGATGTGTATCGTTTGTG TTATGGTGGTTGCCCTAAACATCGCCTCGTTTCTCTTGATGGAGAAAAGCATAAGCACAATTATCTTTGTAAATCCTATC AGCAAATTTTTACGCAAACCGCATCTGCCATGCATTTAATGTCTCAAGCCATTCAACAAGGAGGAACCGCGATTGATGCC GTACCTCTGATTAAAAATACCCTACGTATTTAA
Upstream 100 bases:
>100_bases TTTTGTTTTCTTTCGTTTGTTTGTGATATCGATCTTTAAATCTTAATTTACTTTCGTGTATTGTTGCTCTTGCTTTCAAA TACTTTCGATAGGAATCGTT
Downstream 100 bases:
>100_bases CGCAACACGATAAATTGAAAATAATAACAAGGAGTAAACAATGAACCTGTCCTCATCGAAGAAGACAGTAATTGCAAGCC TAGTTGCTGCTGCCTGTGTA
Product: arylsulfatase regulator (Fe-S oxidoreductase)
Products: NA
Alternate protein names: AnSME homolog [H]
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MASNAQYAAFHMMAKSTSFHCNLKCDYCFYLEKDGVVNKTTSEPSENMSNGMLKCYVRDYIRSHQGQEVDFSWQGGEPTL AGLDFYRNAVKYQQQYAEGKIVTNSFQTNAVAINRQWAEFFSQHNFLLGVSIDGIAEVHDKYRISVNGKPTFERVKRSLE LLKEYKVEFNTLTVINDQNWQRGKETYQALKELGSTHMQFIPIVEVNANCQQSTNGHYSPSQDAELTHFSVPADGYGQFM IAVFNQWVKEDVGQVFVRIFDSILGSWMGYPASTCVQSKECGQAMVIEANGDVYSCDHYVYPANKLGNIEQTSLAQMATS KQQKRFGSAKSLKLTGQCEACDVYRLCYGGCPKHRLVSLDGEKHKHNYLCKSYQQIFTQTASAMHLMSQAIQQGGTAIDA VPLIKNTLRI
Sequences:
>Translated_410_residues MASNAQYAAFHMMAKSTSFHCNLKCDYCFYLEKDGVVNKTTSEPSENMSNGMLKCYVRDYIRSHQGQEVDFSWQGGEPTL AGLDFYRNAVKYQQQYAEGKIVTNSFQTNAVAINRQWAEFFSQHNFLLGVSIDGIAEVHDKYRISVNGKPTFERVKRSLE LLKEYKVEFNTLTVINDQNWQRGKETYQALKELGSTHMQFIPIVEVNANCQQSTNGHYSPSQDAELTHFSVPADGYGQFM IAVFNQWVKEDVGQVFVRIFDSILGSWMGYPASTCVQSKECGQAMVIEANGDVYSCDHYVYPANKLGNIEQTSLAQMATS KQQKRFGSAKSLKLTGQCEACDVYRLCYGGCPKHRLVSLDGEKHKHNYLCKSYQQIFTQTASAMHLMSQAIQQGGTAIDA VPLIKNTLRI >Mature_409_residues ASNAQYAAFHMMAKSTSFHCNLKCDYCFYLEKDGVVNKTTSEPSENMSNGMLKCYVRDYIRSHQGQEVDFSWQGGEPTLA GLDFYRNAVKYQQQYAEGKIVTNSFQTNAVAINRQWAEFFSQHNFLLGVSIDGIAEVHDKYRISVNGKPTFERVKRSLEL LKEYKVEFNTLTVINDQNWQRGKETYQALKELGSTHMQFIPIVEVNANCQQSTNGHYSPSQDAELTHFSVPADGYGQFMI AVFNQWVKEDVGQVFVRIFDSILGSWMGYPASTCVQSKECGQAMVIEANGDVYSCDHYVYPANKLGNIEQTSLAQMATSK QQKRFGSAKSLKLTGQCEACDVYRLCYGGCPKHRLVSLDGEKHKHNYLCKSYQQIFTQTASAMHLMSQAIQQGGTAIDAV PLIKNTLRI
Specific function: Potential Positive Factor For The Regulation Of Arylsulfatase. [C]
COG id: COG0641
COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI48994973, Length=395, Percent_Identity=41.5189873417722, Blast_Score=352, Evalue=2e-98, Organism=Escherichia coli, GI87081923, Length=393, Percent_Identity=41.9847328244275, Blast_Score=329, Evalue=2e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 46275; Mature: 46144
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNAQYAAFHMMAKSTSFHCNLKCDYCFYLEKDGVVNKTTSEPSENMSNGMLKCYVRDY CCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHH IRSHQGQEVDFSWQGGEPTLAGLDFYRNAVKYQQQYAEGKIVTNSFQTNAVAINRQWAEF HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECHHHHHH FSQHNFLLGVSIDGIAEVHDKYRISVNGKPTFERVKRSLELLKEYKVEFNTLTVINDQNW HHCCCEEEEEECCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCC QRGKETYQALKELGSTHMQFIPIVEVNANCQQSTNGHYSPSQDAELTHFSVPADGYGQFM HHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHH IAVFNQWVKEDVGQVFVRIFDSILGSWMGYPASTCVQSKECGQAMVIEANGDVYSCDHYV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHCCCCEEEEEECCCEEECCCEE YPANKLGNIEQTSLAQMATSKQQKRFGSAKSLKLTGQCEACDVYRLCYGGCPKHRLVSLD CCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEEC GEKHKHNYLCKSYQQIFTQTASAMHLMSQAIQQGGTAIDAVPLIKNTLRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCC >Mature Secondary Structure ASNAQYAAFHMMAKSTSFHCNLKCDYCFYLEKDGVVNKTTSEPSENMSNGMLKCYVRDY CCCCCHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHH IRSHQGQEVDFSWQGGEPTLAGLDFYRNAVKYQQQYAEGKIVTNSFQTNAVAINRQWAEF HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECHHHHHH FSQHNFLLGVSIDGIAEVHDKYRISVNGKPTFERVKRSLELLKEYKVEFNTLTVINDQNW HHCCCEEEEEECCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCC QRGKETYQALKELGSTHMQFIPIVEVNANCQQSTNGHYSPSQDAELTHFSVPADGYGQFM HHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHH IAVFNQWVKEDVGQVFVRIFDSILGSWMGYPASTCVQSKECGQAMVIEANGDVYSCDHYV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHCCCCEEEEEECCCEEECCCEE YPANKLGNIEQTSLAQMATSKQQKRFGSAKSLKLTGQCEACDVYRLCYGGCPKHRLVSLD CCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEEC GEKHKHNYLCKSYQQIFTQTASAMHLMSQAIQQGGTAIDAVPLIKNTLRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503; 11222759 [H]