Click here to switch to the map view.

The map label for this gene is yteR [H]

Identifier: 59714179

GI number: 59714179

Start: 1120650

End: 1121699

Strand: Reverse

Name: yteR [H]

Synonym: VF_A0996

Alternate gene names: 59714179

Gene position: 1121699-1120650 (Counterclockwise)

Preceding gene: 59714180

Following gene: 59714176

Centisome position: 84.32

GC content: 41.24

Gene sequence:

>1050_bases
ATGACATTAGGAACAAAGCAAGACGTATTACAAGCGATGAAGCGAGTTTATCGCTACCAAGCTGAAAACCAAACAAGAAG
TGTAGTAAGACGCAGTGGTAAGACCCGTTTTATTAAAGATACTGATTGGGAACGTGGTGTTTTTTGGTCGTGTGTTGCCG
CGGCATGGAAAGCGACGGGAGACACTGAATATCTGGATGGTGTAAAAAATTACGCTCTACATACTGGATTCAGAACTGGA
CCTAATGCTCGTTTTGCTGATGACCATGTTTGTTGCCAAGCCTACCTTGATATTTATTCTGAATTTAACCAACCCGAAGC
CTTAGAGCCAACCATTAAAGCGCTTGATATTATGGTTAATGAACCAGAGCTAGGTCGCAAAGATTGGTGGTGGTGTGATT
CATTATTTATGGCGCCGCCAGCTTTTGTTGCATTATCAAAGCAAACAGGTGATTCAAAATACTTGGATTACATGAATACT
GCTTTTTGGGATTCAGCAGAGCATTTATTAGATACAGAAACGGGTTTGTATTATCGTGACTATCGCTATATTCCAAATGG
AAATGGTGAAGAGTTACGAGAAGAAAACGGCAATAAGGTATTTTGGAGTCGTGGTATTGGATGGGTACTAGCATCAGTTC
CTCGTATTCTAGCGAATATGCCTGAAGACTACATGAATCGTTCTGAGTACATTACTCTATTTACACATTTAGCGGCTGAA
GTAATTAAATACCAGCAAGACGATGGTTTTTGGCGTACTAGCCTATTAGCTCCTGAAAACTTCCCTGCACCTGAAAGCAG
TGCAACTGCTCTGTTTTGTTATGGTTTAGCATGGGGCGTTAATACTGGTGAGTTGGATAAAGAAACTTACTTACCAGTTA
TCGAAAAAGCGTGGGTAGCCTTACTTGAATGTATTCACGATAACGGCATGATTGGTTGGGTACAGCTACCAGCCTTTAAT
CCACGTGACGTTAAGTTTGAGCATAACATCGATTATGGTGCGGGTGCTTTCATGCTAGCAGCAACAGAGGTTGCAAAATT
AGCTGAATAA

Upstream 100 bases:

>100_bases
TTCCTAGCATCACCTGCAAGTGACTATATTAATGGTTATACGATTGCGGTTGATGGTGGCTGGTTAGCTCGTTAATCTAA
AGAACAGAAGGAACAGCAAA

Downstream 100 bases:

>100_bases
ATATTTCTCTGATGTGTTGAATACCAAAAGCCGATCATGTGATCGGCTTTTTTATTTATTGACTCTGCGTGGTTTTATTT
AATCACTAAGCTACTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: URH [H]

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MTLGTKQDVLQAMKRVYRYQAENQTRSVVRRSGKTRFIKDTDWERGVFWSCVAAAWKATGDTEYLDGVKNYALHTGFRTG
PNARFADDHVCCQAYLDIYSEFNQPEALEPTIKALDIMVNEPELGRKDWWWCDSLFMAPPAFVALSKQTGDSKYLDYMNT
AFWDSAEHLLDTETGLYYRDYRYIPNGNGEELREENGNKVFWSRGIGWVLASVPRILANMPEDYMNRSEYITLFTHLAAE
VIKYQQDDGFWRTSLLAPENFPAPESSATALFCYGLAWGVNTGELDKETYLPVIEKAWVALLECIHDNGMIGWVQLPAFN
PRDVKFEHNIDYGAGAFMLAATEVAKLAE

Sequences:

>Translated_349_residues
MTLGTKQDVLQAMKRVYRYQAENQTRSVVRRSGKTRFIKDTDWERGVFWSCVAAAWKATGDTEYLDGVKNYALHTGFRTG
PNARFADDHVCCQAYLDIYSEFNQPEALEPTIKALDIMVNEPELGRKDWWWCDSLFMAPPAFVALSKQTGDSKYLDYMNT
AFWDSAEHLLDTETGLYYRDYRYIPNGNGEELREENGNKVFWSRGIGWVLASVPRILANMPEDYMNRSEYITLFTHLAAE
VIKYQQDDGFWRTSLLAPENFPAPESSATALFCYGLAWGVNTGELDKETYLPVIEKAWVALLECIHDNGMIGWVQLPAFN
PRDVKFEHNIDYGAGAFMLAATEVAKLAE
>Mature_348_residues
TLGTKQDVLQAMKRVYRYQAENQTRSVVRRSGKTRFIKDTDWERGVFWSCVAAAWKATGDTEYLDGVKNYALHTGFRTGP
NARFADDHVCCQAYLDIYSEFNQPEALEPTIKALDIMVNEPELGRKDWWWCDSLFMAPPAFVALSKQTGDSKYLDYMNTA
FWDSAEHLLDTETGLYYRDYRYIPNGNGEELREENGNKVFWSRGIGWVLASVPRILANMPEDYMNRSEYITLFTHLAAEV
IKYQQDDGFWRTSLLAPENFPAPESSATALFCYGLAWGVNTGELDKETYLPVIEKAWVALLECIHDNGMIGWVQLPAFNP
RDVKFEHNIDYGAGAFMLAATEVAKLAE

Specific function: Catalyzes the hydrolysis of unsaturated rhamnogalacturonan disaccharide to yield unsaturated D- galacturonic acid and L-rhamnose. It cannot act on unsaturated glucuronyl hydrolase (UGL) substrates containing unsaturated D- glucuronic acid at the non-reduc

COG id: COG4225

COG function: function code R; Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 105 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010905 [H]

Pfam domain/function: PF07470 Glyco_hydro_88 [H]

EC number: NA

Molecular weight: Translated: 39888; Mature: 39757

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLGTKQDVLQAMKRVYRYQAENQTRSVVRRSGKTRFIKDTDWERGVFWSCVAAAWKATG
CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCC
DTEYLDGVKNYALHTGFRTGPNARFADDHVCCQAYLDIYSEFNQPEALEPTIKALDIMVN
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEC
EPELGRKDWWWCDSLFMAPPAFVALSKQTGDSKYLDYMNTAFWDSAEHLLDTETGLYYRD
CCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCCCCCEEEE
YRYIPNGNGEELREENGNKVFWSRGIGWVLASVPRILANMPEDYMNRSEYITLFTHLAAE
EEECCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
VIKYQQDDGFWRTSLLAPENFPAPESSATALFCYGLAWGVNTGELDKETYLPVIEKAWVA
HHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHH
LLECIHDNGMIGWVQLPAFNPRDVKFEHNIDYGAGAFMLAATEVAKLAE
HHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLGTKQDVLQAMKRVYRYQAENQTRSVVRRSGKTRFIKDTDWERGVFWSCVAAAWKATG
CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCC
DTEYLDGVKNYALHTGFRTGPNARFADDHVCCQAYLDIYSEFNQPEALEPTIKALDIMVN
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEC
EPELGRKDWWWCDSLFMAPPAFVALSKQTGDSKYLDYMNTAFWDSAEHLLDTETGLYYRD
CCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCCCCCEEEE
YRYIPNGNGEELREENGNKVFWSRGIGWVLASVPRILANMPEDYMNRSEYITLFTHLAAE
EEECCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
VIKYQQDDGFWRTSLLAPENFPAPESSATALFCYGLAWGVNTGELDKETYLPVIEKAWVA
HHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHH
LLECIHDNGMIGWVQLPAFNPRDVKFEHNIDYGAGAFMLAATEVAKLAE
HHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]