Definition Vibrio fischeri ES114 chromosome chromosome II, complete sequence.
Accession NC_006841
Length 1,330,333

Click here to switch to the map view.

The map label for this gene is 59713900

Identifier: 59713900

GI number: 59713900

Start: 808534

End: 809736

Strand: Reverse

Name: 59713900

Synonym: VF_A0717

Alternate gene names: NA

Gene position: 809736-808534 (Counterclockwise)

Preceding gene: 59713901

Following gene: 59713899

Centisome position: 60.87

GC content: 38.32

Gene sequence:

>1203_bases
ATGGCTTTAAATAAAACATTCCTTATTGCATGCACTGTGATACTCCTATACGGATGCAACCAAGACGAATCCTCAACACC
AAATGCGGTAGTTGAACCACCAAAAACTGATGTCGAATTGCTTAACGAGCAAGAGTGGGATGATAACCGTGTTTATGTCA
CTAAAGATAACTACATTTTAATGAAAGAAGCCAATGGCACGATACCGGGAATAATGAAGCCCTGCTTTGTGGTGAACAGC
GCCAAAGAGTGGCCAAGAGAAGATTTATCAAATGCGGATTCTTACGACTTACCGAGAGTGGATTTCAGGTGGAATAACGG
GGATTTTGTGAGTGCTTCTGCTAGTGAAAAAGCCATTTACGAATCTTACGATAAAGTATGGAGTATAAAAACAGATGGTA
CCGATTTGCGATTAGTGACGGATGATTTTAGTGGTGATGTACGTATTATGCGCCGTTCCCCCAACAACCGTTATTTAGCT
TATTCATATGCATCAAGAACAAGCGGTGGCACTGATAAAGTAGTATTCGATGTGCAAACTCAGAAATCCACATTACTTGG
TACAGATTTAGGTCATTCTCAATTTCTCTGGGCGGAAGATAGTAGCTATCTGTATTTTGAAGACAGAGCCATATATTGGA
AATACGAACTTGCTACAGGCAAAACCACTCAAATGGACGATGATTTTTATTTCTCAGAAGTTGGGGTGATATACGGCGGT
AAGCGGTATGTGGTCTCTGATTATGGGATTGTTGTTTTTAACGAGAGTAATAACAAACGACTTTATTCAATAGGTTTATC
TACAGCTGAAGAGGATAAACTCGCTGTTAAGAACATTTCACTTTCGTATGATAGAAAATATTTTTTGAAAAGCAGGTCAA
TCAGCCCTGATGGAAAGTATGCGTGGGGTGAGTCGGCACAATATCGTTATTTTATTAATACAGAAACAAAAGAAGTTAAA
TTAGAAAAAAAAGACCGAAAGAAAAAAAGCCAATACCGATTTTTTGATGTATTAGGATTTAATGCCGAATATGTTCGCTC
AGCTTCTGCTGGCAGTGCAAGACAGTATAAATTAACAAAAGATAAAAAATTATTTTCTCAAACTCTGCATTGGGGACAAA
TCTGCTCAGGCCATTCCGCAACACTGTCTTGGTTATACAACGGTTTTGCAAATAATGGTGCATTTGTTAAGGAGGATAAA
TGA

Upstream 100 bases:

>100_bases
CTCAGCATTGGGGGCAAATCTGCTCAGGCCATTCAGCAACACTGTCGTGGTTATACAATGGTTTTGCAAATAATGGTGCA
TTTATCAAGGAGGGTAAATA

Downstream 100 bases:

>100_bases
TGAGTAATAAAGCAGTGTTAGCTGAAGGGATTTATTTATTTTCTACGCAGTTTTATGGGTAATATAATGAAACAACAAGA
AAAACTTTATTTGAAAACTG

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MALNKTFLIACTVILLYGCNQDESSTPNAVVEPPKTDVELLNEQEWDDNRVYVTKDNYILMKEANGTIPGIMKPCFVVNS
AKEWPREDLSNADSYDLPRVDFRWNNGDFVSASASEKAIYESYDKVWSIKTDGTDLRLVTDDFSGDVRIMRRSPNNRYLA
YSYASRTSGGTDKVVFDVQTQKSTLLGTDLGHSQFLWAEDSSYLYFEDRAIYWKYELATGKTTQMDDDFYFSEVGVIYGG
KRYVVSDYGIVVFNESNNKRLYSIGLSTAEEDKLAVKNISLSYDRKYFLKSRSISPDGKYAWGESAQYRYFINTETKEVK
LEKKDRKKKSQYRFFDVLGFNAEYVRSASAGSARQYKLTKDKKLFSQTLHWGQICSGHSATLSWLYNGFANNGAFVKEDK

Sequences:

>Translated_400_residues
MALNKTFLIACTVILLYGCNQDESSTPNAVVEPPKTDVELLNEQEWDDNRVYVTKDNYILMKEANGTIPGIMKPCFVVNS
AKEWPREDLSNADSYDLPRVDFRWNNGDFVSASASEKAIYESYDKVWSIKTDGTDLRLVTDDFSGDVRIMRRSPNNRYLA
YSYASRTSGGTDKVVFDVQTQKSTLLGTDLGHSQFLWAEDSSYLYFEDRAIYWKYELATGKTTQMDDDFYFSEVGVIYGG
KRYVVSDYGIVVFNESNNKRLYSIGLSTAEEDKLAVKNISLSYDRKYFLKSRSISPDGKYAWGESAQYRYFINTETKEVK
LEKKDRKKKSQYRFFDVLGFNAEYVRSASAGSARQYKLTKDKKLFSQTLHWGQICSGHSATLSWLYNGFANNGAFVKEDK
>Mature_399_residues
ALNKTFLIACTVILLYGCNQDESSTPNAVVEPPKTDVELLNEQEWDDNRVYVTKDNYILMKEANGTIPGIMKPCFVVNSA
KEWPREDLSNADSYDLPRVDFRWNNGDFVSASASEKAIYESYDKVWSIKTDGTDLRLVTDDFSGDVRIMRRSPNNRYLAY
SYASRTSGGTDKVVFDVQTQKSTLLGTDLGHSQFLWAEDSSYLYFEDRAIYWKYELATGKTTQMDDDFYFSEVGVIYGGK
RYVVSDYGIVVFNESNNKRLYSIGLSTAEEDKLAVKNISLSYDRKYFLKSRSISPDGKYAWGESAQYRYFINTETKEVKL
EKKDRKKKSQYRFFDVLGFNAEYVRSASAGSARQYKLTKDKKLFSQTLHWGQICSGHSATLSWLYNGFANNGAFVKEDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45838; Mature: 45707

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNKTFLIACTVILLYGCNQDESSTPNAVVEPPKTDVELLNEQEWDDNRVYVTKDNYIL
CCCCCHHHHHHHHHHEECCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCEEEEEECCEEE
MKEANGTIPGIMKPCFVVNSAKEWPREDLSNADSYDLPRVDFRWNNGDFVSASASEKAIY
EECCCCCCCCCCCCEEEECCCHHCCHHHHCCCCCCCCCCEEEEECCCCEEECCCCCHHHH
ESYDKVWSIKTDGTDLRLVTDDFSGDVRIMRRSPNNRYLAYSYASRTSGGTDKVVFDVQT
HHHHHEEEEEECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEC
QKSTLLGTDLGHSQFLWAEDSSYLYFEDRAIYWKYELATGKTTQMDDDFYFSEVGVIYGG
CCCEEEECCCCCCEEEEECCCCEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEEEECC
KRYVVSDYGIVVFNESNNKRLYSIGLSTAEEDKLAVKNISLSYDRKYFLKSRSISPDGKY
EEEEEECCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCE
AWGESAQYRYFINTETKEVKLEKKDRKKKSQYRFFDVLGFNAEYVRSASAGSARQYKLTK
ECCCCCEEEEEEECCCEEEEECHHHHHHHHHCEEEEEECCCHHHHHCCCCCCCEEEEECH
DKKLFSQTLHWGQICSGHSATLSWLYNGFANNGAFVKEDK
HHHHHHHHCCHHHHCCCCCCEEHHHHHCCCCCCEEEECCC
>Mature Secondary Structure 
ALNKTFLIACTVILLYGCNQDESSTPNAVVEPPKTDVELLNEQEWDDNRVYVTKDNYIL
CCCCHHHHHHHHHHEECCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCEEEEEECCEEE
MKEANGTIPGIMKPCFVVNSAKEWPREDLSNADSYDLPRVDFRWNNGDFVSASASEKAIY
EECCCCCCCCCCCCEEEECCCHHCCHHHHCCCCCCCCCCEEEEECCCCEEECCCCCHHHH
ESYDKVWSIKTDGTDLRLVTDDFSGDVRIMRRSPNNRYLAYSYASRTSGGTDKVVFDVQT
HHHHHEEEEEECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEC
QKSTLLGTDLGHSQFLWAEDSSYLYFEDRAIYWKYELATGKTTQMDDDFYFSEVGVIYGG
CCCEEEECCCCCCEEEEECCCCEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEEEECC
KRYVVSDYGIVVFNESNNKRLYSIGLSTAEEDKLAVKNISLSYDRKYFLKSRSISPDGKY
EEEEEECCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCE
AWGESAQYRYFINTETKEVKLEKKDRKKKSQYRFFDVLGFNAEYVRSASAGSARQYKLTK
ECCCCCEEEEEEECCCEEEEECHHHHHHHHHCEEEEEECCCHHHHHCCCCCCCEEEEECH
DKKLFSQTLHWGQICSGHSATLSWLYNGFANNGAFVKEDK
HHHHHHHHCCHHHHCCCCCCEEHHHHHCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA