Definition Vibrio fischeri ES114 chromosome chromosome II, complete sequence.
Accession NC_006841
Length 1,330,333

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The map label for this gene is 59713770

Identifier: 59713770

GI number: 59713770

Start: 671420

End: 671695

Strand: Reverse

Name: 59713770

Synonym: VF_A0587

Alternate gene names: NA

Gene position: 671695-671420 (Counterclockwise)

Preceding gene: 59713771

Following gene: 59713769

Centisome position: 50.49

GC content: 38.41

Gene sequence:

>276_bases
ATGGGGCTTTTTTCACGTCTATTTGGCTCATCAACTGCAACTGAACCTACTGTTGAACCAGTTGAGTACAAATCTTTTCT
CATCTATCCAAACTCAGAACCTGACGGTTCACAATTTCGAATTGCTGGAAAACTCACCAAAGAAATCAACGGCGAATTAA
AAGAACATCGCTTTATTCGCTCCGATGTTATCTCATCAAAAGCCAACGCCGATGAACTCATGGTAAGTAAAGCAAAAGTA
CTGATCGATCAACTTGGTGATTCATTATTTAAATAA

Upstream 100 bases:

>100_bases
GAGCTCTTTGACGAAGAATAATCTCAGTTTATTAGAGTCGATCTACTTAAAAATTAACTCTCTCATGTATAATAAGCCTT
ATTTCAAAAAGGAAAATGAA

Downstream 100 bases:

>100_bases
TGTAACTAGATTGATATTAAAAAATAAACAATTTGATTGTTTTTTCGACTTATTCTTGAAAATCAATAAGTAACAATTAG
TGGTTTGACCTCTTTTTTGT

Product: transcriptional activator HlyU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MGLFSRLFGSSTATEPTVEPVEYKSFLIYPNSEPDGSQFRIAGKLTKEINGELKEHRFIRSDVISSKANADELMVSKAKV
LIDQLGDSLFK

Sequences:

>Translated_91_residues
MGLFSRLFGSSTATEPTVEPVEYKSFLIYPNSEPDGSQFRIAGKLTKEINGELKEHRFIRSDVISSKANADELMVSKAKV
LIDQLGDSLFK
>Mature_90_residues
GLFSRLFGSSTATEPTVEPVEYKSFLIYPNSEPDGSQFRIAGKLTKEINGELKEHRFIRSDVISSKANADELMVSKAKVL
IDQLGDSLFK

Specific function: Unknown

COG id: COG5453

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10126; Mature: 9994

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFSRLFGSSTATEPTVEPVEYKSFLIYPNSEPDGSQFRIAGKLTKEINGELKEHRFIR
CCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEHHHHHHHHCCHHHHHHHHH
SDVISSKANADELMVSKAKVLIDQLGDSLFK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLFSRLFGSSTATEPTVEPVEYKSFLIYPNSEPDGSQFRIAGKLTKEINGELKEHRFIR
CHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEHHHHHHHHCCHHHHHHHHH
SDVISSKANADELMVSKAKVLIDQLGDSLFK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA