| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713770
Identifier: 59713770
GI number: 59713770
Start: 671420
End: 671695
Strand: Reverse
Name: 59713770
Synonym: VF_A0587
Alternate gene names: NA
Gene position: 671695-671420 (Counterclockwise)
Preceding gene: 59713771
Following gene: 59713769
Centisome position: 50.49
GC content: 38.41
Gene sequence:
>276_bases ATGGGGCTTTTTTCACGTCTATTTGGCTCATCAACTGCAACTGAACCTACTGTTGAACCAGTTGAGTACAAATCTTTTCT CATCTATCCAAACTCAGAACCTGACGGTTCACAATTTCGAATTGCTGGAAAACTCACCAAAGAAATCAACGGCGAATTAA AAGAACATCGCTTTATTCGCTCCGATGTTATCTCATCAAAAGCCAACGCCGATGAACTCATGGTAAGTAAAGCAAAAGTA CTGATCGATCAACTTGGTGATTCATTATTTAAATAA
Upstream 100 bases:
>100_bases GAGCTCTTTGACGAAGAATAATCTCAGTTTATTAGAGTCGATCTACTTAAAAATTAACTCTCTCATGTATAATAAGCCTT ATTTCAAAAAGGAAAATGAA
Downstream 100 bases:
>100_bases TGTAACTAGATTGATATTAAAAAATAAACAATTTGATTGTTTTTTCGACTTATTCTTGAAAATCAATAAGTAACAATTAG TGGTTTGACCTCTTTTTTGT
Product: transcriptional activator HlyU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MGLFSRLFGSSTATEPTVEPVEYKSFLIYPNSEPDGSQFRIAGKLTKEINGELKEHRFIRSDVISSKANADELMVSKAKV LIDQLGDSLFK
Sequences:
>Translated_91_residues MGLFSRLFGSSTATEPTVEPVEYKSFLIYPNSEPDGSQFRIAGKLTKEINGELKEHRFIRSDVISSKANADELMVSKAKV LIDQLGDSLFK >Mature_90_residues GLFSRLFGSSTATEPTVEPVEYKSFLIYPNSEPDGSQFRIAGKLTKEINGELKEHRFIRSDVISSKANADELMVSKAKVL IDQLGDSLFK
Specific function: Unknown
COG id: COG5453
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10126; Mature: 9994
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFSRLFGSSTATEPTVEPVEYKSFLIYPNSEPDGSQFRIAGKLTKEINGELKEHRFIR CCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEHHHHHHHHCCHHHHHHHHH SDVISSKANADELMVSKAKVLIDQLGDSLFK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GLFSRLFGSSTATEPTVEPVEYKSFLIYPNSEPDGSQFRIAGKLTKEINGELKEHRFIR CHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEHHHHHHHHCCHHHHHHHHH SDVISSKANADELMVSKAKVLIDQLGDSLFK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA