| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713683
Identifier: 59713683
GI number: 59713683
Start: 576604
End: 576846
Strand: Reverse
Name: 59713683
Synonym: VF_A0500
Alternate gene names: NA
Gene position: 576846-576604 (Counterclockwise)
Preceding gene: 59713684
Following gene: 59713680
Centisome position: 43.36
GC content: 40.74
Gene sequence:
>243_bases ATGGCTCGTATCGTTCGTTATACTTACAAGTCTGAAACAAAAGAGATCCCTTTCTCTTTTCGTGAATTTCACGGCCCATT TGAAGCTGCAGCGGCTGCTGAAGGTATTGATATCTCAGATTTCGATACTATGTTGAAGCAAGTTGAAATGGCCTCAAATA ACCCTGGTGCGGTTAAAGATTTCCGTCACAGCTACTTTACAAAGCTTGGCTTTTCAAAAGTACGTTTCGTGAAAGAAGAC TAA
Upstream 100 bases:
>100_bases AAAGCACGTCGTGATCCAATCATGAAGCGTGAACTTGCTGAAATCTTCAAAAAATAATTAATATTGGATGGCTTTAGTGC CATCCTTTTTCGGAGAAATA
Downstream 100 bases:
>100_bases TTAGCGAATTTGCGTTAGTCTCCCTAGCATTGATGGATGATATGCCCATGTGTGGTCAAACATCGCCATTAATGCTGGAT TTCCATATTTTGATAAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MARIVRYTYKSETKEIPFSFREFHGPFEAAAAAEGIDISDFDTMLKQVEMASNNPGAVKDFRHSYFTKLGFSKVRFVKED
Sequences:
>Translated_80_residues MARIVRYTYKSETKEIPFSFREFHGPFEAAAAAEGIDISDFDTMLKQVEMASNNPGAVKDFRHSYFTKLGFSKVRFVKED >Mature_79_residues ARIVRYTYKSETKEIPFSFREFHGPFEAAAAAEGIDISDFDTMLKQVEMASNNPGAVKDFRHSYFTKLGFSKVRFVKED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9203; Mature: 9072
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIVRYTYKSETKEIPFSFREFHGPFEAAAAAEGIDISDFDTMLKQVEMASNNPGAVKD CCCEEEECCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHH FRHSYFTKLGFSKVRFVKED HHHHHHHHHCHHHHEEEECC >Mature Secondary Structure ARIVRYTYKSETKEIPFSFREFHGPFEAAAAAEGIDISDFDTMLKQVEMASNNPGAVKD CCEEEECCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHH FRHSYFTKLGFSKVRFVKED HHHHHHHHHCHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA