| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713684
Identifier: 59713684
GI number: 59713684
Start: 576890
End: 577327
Strand: Reverse
Name: 59713684
Synonym: VF_A0501
Alternate gene names: NA
Gene position: 577327-576890 (Counterclockwise)
Preceding gene: 59713686
Following gene: 59713683
Centisome position: 43.4
GC content: 38.58
Gene sequence:
>438_bases ATGTCTGAAGTTGAAAACACACAAAAAGAAGCTATCGATCTAGAAACGATCTCTCCTGAACTTAAAAAAGTTATCGAATT TGAAAACGTTCCTGAAGAAATGTGGCACATGCTTGTTTCTGTGCACGAAGTAGCTGAAATCGCAGTTCGTGAATCTTGGG ATGCAATGCCAGCTAGTGCTCAAAAAGTTCTAGATAACTTTGAGCAATTCCACGCATTAGTTTCTCTAAGCCAAAGCTAC GCTGGTTATGATTTCATGGCTGAGTTCGAAAACTTAGACCTACCAGAAAACATGGACGAAGATGCTCAAGCTGAATACCG TTCACAACTTCTTGATCAAGTTTTACACAACTGTGTGAAAGATCTAGTTAAGCAAATCAAAAAAGCACGTCGTGATCCAA TCATGAAGCGTGAACTTGCTGAAATCTTCAAAAAATAA
Upstream 100 bases:
>100_bases AAACCACGATTTCTTACCAAATGTCCCTTATAGGAATGAATAAAATTGACATTTCTGATGGTCTAGTTACCATTTCCTTT TTATATGACGAGAAATTCCC
Downstream 100 bases:
>100_bases TTAATATTGGATGGCTTTAGTGCCATCCTTTTTCGGAGAAATAATGGCTCGTATCGTTCGTTATACTTACAAGTCTGAAA CAAAAGAGATCCCTTTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSEVENTQKEAIDLETISPELKKVIEFENVPEEMWHMLVSVHEVAEIAVRESWDAMPASAQKVLDNFEQFHALVSLSQSY AGYDFMAEFENLDLPENMDEDAQAEYRSQLLDQVLHNCVKDLVKQIKKARRDPIMKRELAEIFKK
Sequences:
>Translated_145_residues MSEVENTQKEAIDLETISPELKKVIEFENVPEEMWHMLVSVHEVAEIAVRESWDAMPASAQKVLDNFEQFHALVSLSQSY AGYDFMAEFENLDLPENMDEDAQAEYRSQLLDQVLHNCVKDLVKQIKKARRDPIMKRELAEIFKK >Mature_144_residues SEVENTQKEAIDLETISPELKKVIEFENVPEEMWHMLVSVHEVAEIAVRESWDAMPASAQKVLDNFEQFHALVSLSQSYA GYDFMAEFENLDLPENMDEDAQAEYRSQLLDQVLHNCVKDLVKQIKKARRDPIMKRELAEIFKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16872; Mature: 16741
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVENTQKEAIDLETISPELKKVIEFENVPEEMWHMLVSVHEVAEIAVRESWDAMPASA CCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QKVLDNFEQFHALVSLSQSYAGYDFMAEFENLDLPENMDEDAQAEYRSQLLDQVLHNCVK HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DLVKQIKKARRDPIMKRELAEIFKK HHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SEVENTQKEAIDLETISPELKKVIEFENVPEEMWHMLVSVHEVAEIAVRESWDAMPASA CCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QKVLDNFEQFHALVSLSQSYAGYDFMAEFENLDLPENMDEDAQAEYRSQLLDQVLHNCVK HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DLVKQIKKARRDPIMKRELAEIFKK HHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA