Definition Vibrio fischeri ES114 chromosome chromosome II, complete sequence.
Accession NC_006841
Length 1,330,333

Click here to switch to the map view.

The map label for this gene is 59713632

Identifier: 59713632

GI number: 59713632

Start: 517067

End: 517312

Strand: Reverse

Name: 59713632

Synonym: VF_A0449

Alternate gene names: NA

Gene position: 517312-517067 (Counterclockwise)

Preceding gene: 59713633

Following gene: 59713631

Centisome position: 38.89

GC content: 33.74

Gene sequence:

>246_bases
ATGCCAACGATTGATATTCCTAAGAACAAACGTGACGAATTAATCCAACAATTTCAGCGCTATTTTGAACAAGAACTTGA
TCATGAATTAGGTCAATTTGATGGGGAGTTCTTATTAGATTTCATTATTAAGCAAACAGGACCTGTCTTTTATAATCAGG
GATTAGCCGATGCTCAAGCTATTATTGAACGTAAAACTCAAGATATTGCTGATGAAATATATGAAATTGAAATGGCGGAA
AGCTAA

Upstream 100 bases:

>100_bases
CCTTGGAGATAATACTATCTCTAAGGGTATTCTTTCCCAATTTGAGTCTTCATTTTTTATCAGTACAATATCAATACATT
CAATAAATCAAGGAAGTACA

Downstream 100 bases:

>100_bases
ATAAATATAAATAAAGAACTCTTATTTAAACAGCAGGTTAACCAGTAAAAGCTAACCTAAAGACAAAAAAGCCCATAAAT
TGTTACATTTGCCATCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MPTIDIPKNKRDELIQQFQRYFEQELDHELGQFDGEFLLDFIIKQTGPVFYNQGLADAQAIIERKTQDIADEIYEIEMAE
S

Sequences:

>Translated_81_residues
MPTIDIPKNKRDELIQQFQRYFEQELDHELGQFDGEFLLDFIIKQTGPVFYNQGLADAQAIIERKTQDIADEIYEIEMAE
S
>Mature_80_residues
PTIDIPKNKRDELIQQFQRYFEQELDHELGQFDGEFLLDFIIKQTGPVFYNQGLADAQAIIERKTQDIADEIYEIEMAES

Specific function: Unknown

COG id: COG5460

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9540; Mature: 9409

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIDIPKNKRDELIQQFQRYFEQELDHELGQFDGEFLLDFIIKQTGPVFYNQGLADAQA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHCCCHHHHHH
IIERKTQDIADEIYEIEMAES
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTIDIPKNKRDELIQQFQRYFEQELDHELGQFDGEFLLDFIIKQTGPVFYNQGLADAQA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHCCCHHHHHH
IIERKTQDIADEIYEIEMAES
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA