| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713599
Identifier: 59713599
GI number: 59713599
Start: 470789
End: 471130
Strand: Reverse
Name: 59713599
Synonym: VF_A0416
Alternate gene names: NA
Gene position: 471130-470789 (Counterclockwise)
Preceding gene: 59713600
Following gene: 59713595
Centisome position: 35.41
GC content: 34.5
Gene sequence:
>342_bases ATGCCGCAATTAGATATCCATGGTTATCATATCCATGTTTACTTTGACGAAAGTAATATTGACTATGCCATCGCATTAAC CGAAAGCGTACATAAAGAGTATGGTTATGAATTAGGACGCATTAATAAAAAACCAGTAGGACCGCATCCTGTATGGAGTC GTCAAGTTTCATTTAAACAAGAAAATTATGATGAAGTACTTACGTATTTAACTCTGCATCAAAATGGATTAAGTATTCTT ATTCACCCATTAACTGATGATGAATATCTTGACCACACTCAATCAGCCGTTTGGCTTGGAACACCTCTTAAGCTTGATAT AAGCATATTCACAAAAAAGTAA
Upstream 100 bases:
>100_bases ATTCTAGATTGGGAATAATCATTCTCATTTAAAATGAACTATAATAAGGCTAAACTTCGGTTTGGCCTTTTTTATTTTCA TTTTTAGAGAACTATTTCAC
Downstream 100 bases:
>100_bases AAAATAAAGCTCCTCTCGTTTTAAGATAAAACTAAGGAGCTTCTATTTTTTAGGTTATCTTAAATTAAGATTTATTAACT CGCTTGATATAAATTAAATT
Product: DOPA 4,5-dioxygenase
Products: NA
Alternate protein names: Aromatic Ring-Cleaving Dioxygenase-Like Protein; Dopa 4 5-Dioxygenase Family Protein; Dioxygenase; Aromatic Ring-Cleaving Dioxygenase-Like; Aromatic Ring-Cleaving Dioxygenase; Dopa 4 5-Dioxygenase Family; DOPA-Dioxygenase-Like Protein; DOPA 4 5-Dioxygenase-Related Protein; DOPA 4 5-Dioxygenase
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MPQLDIHGYHIHVYFDESNIDYAIALTESVHKEYGYELGRINKKPVGPHPVWSRQVSFKQENYDEVLTYLTLHQNGLSIL IHPLTDDEYLDHTQSAVWLGTPLKLDISIFTKK
Sequences:
>Translated_113_residues MPQLDIHGYHIHVYFDESNIDYAIALTESVHKEYGYELGRINKKPVGPHPVWSRQVSFKQENYDEVLTYLTLHQNGLSIL IHPLTDDEYLDHTQSAVWLGTPLKLDISIFTKK >Mature_112_residues PQLDIHGYHIHVYFDESNIDYAIALTESVHKEYGYELGRINKKPVGPHPVWSRQVSFKQENYDEVLTYLTLHQNGLSILI HPLTDDEYLDHTQSAVWLGTPLKLDISIFTKK
Specific function: Unknown
COG id: COG3805
COG function: function code Q; Aromatic ring-cleaving dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.14.99.-
Molecular weight: Translated: 13136; Mature: 13005
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLDIHGYHIHVYFDESNIDYAIALTESVHKEYGYELGRINKKPVGPHPVWSRQVSFKQ CCCCCCCEEEEEEEECCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCC ENYDEVLTYLTLHQNGLSILIHPLTDDEYLDHTQSAVWLGTPLKLDISIFTKK CCHHHHEEEEEECCCCEEEEEEECCCCHHHCCCCCEEEECCCEEEEEEEEECC >Mature Secondary Structure PQLDIHGYHIHVYFDESNIDYAIALTESVHKEYGYELGRINKKPVGPHPVWSRQVSFKQ CCCCCCEEEEEEEECCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCC ENYDEVLTYLTLHQNGLSILIHPLTDDEYLDHTQSAVWLGTPLKLDISIFTKK CCHHHHEEEEEECCCCEEEEEEECCCCHHHCCCCCEEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA