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The map label for this gene is arlS [H]

Identifier: 59713448

GI number: 59713448

Start: 296576

End: 297832

Strand: Reverse

Name: arlS [H]

Synonym: VF_A0265

Alternate gene names: 59713448

Gene position: 297832-296576 (Counterclockwise)

Preceding gene: 59713449

Following gene: 59713447

Centisome position: 22.39

GC content: 36.12

Gene sequence:

>1257_bases
ATGGAAAAGGCTACCGACTTAAATAAAGGCTCGCAACAACCAAGCTTTTTTAAAAAAATCCGTTGGACATTTGGCATCCT
CACTTTTTTGATGTTCGGATTATTCTGGGCGGTTATTTATATTGCAGAAGATCAATTAGAGATCATTAGCTTACATCACT
GGTTAGACACAGAAGCAAACCAATACATCAAAAAATACGCACAACTAGGTGAAGATACACCATTACCTAATGAAGATGAG
TTTTCTACGTATTGGAGTGAAAGAGAGCACCCTCTTTGGCTAAATAACTATAAAAAAGCAGGTCTATATGAGCAACTTTT
AGGCACAGAAGATAAGCACTTTATCGTTAGTCCACATCCTTCTGGTAAGGGACTACTGTATATACTTTTTCAAGATGATG
CAGATGACTATTTAGATGAATACGAGGCAAACCTACACACATTGACTCTCTTCTTAGGTACTATATCAACCATATTAATG
ATCTTATATGGTATTTATTTTGTTCGCAGTATCTCGGTGCCACTTCGTCATATCCAACACAAAGTAGGATTAATGTCTCC
CGAACACCCAGACTTTACTATTGATACTAAATATCAAGAAACCCAAGAGATTGAACGTTCTCTTTTAGAAAGCAAACATC
ATATTGCTCAATTCTTTACGAGAGAGAAAGAGTTCAGTCGCTTTGCTTCTCATGAATTAAGAACACCAATAATGGTAATC
CAAGGCTCTGCTGACTTATTAGCAAAAGTGCCAAATCAACCAAATGTTGCTCTAAAAGCAATTAATCGCTTACATCAAGC
CAGTGAAGAGATGACACTGCTTACAGAAACCTTTTTGCTTTTAGGTAAACAAGACATTGAAGCGCATCATTTTCATCATT
ATAAAATTGAAGATATTCTAAAAACCCAGCTCAATCATTTACAGCCTTTATTCGCAAAACAAGAGATGGGAGCACAACTT
TCAATTATTGAAGGAGAGCCTTGTCTTGCTCCTAGTAGCTTCATTACCGTTGTGATAAATAACTTAATCAAGAATGCTTT
CAGTTACAGTGTAGGAGACATTCAAATAGAGCTTAATAACAACCAACTTTGCATTACCAACTGCCACGATGGCAATGATA
CCTATAATGCAGGATATGGTTGTGGCCTAGTTATTGTTGAACGTATTTGTGAAAGAATGAACTGGGCATTCACCATAGAA
CAAACAGAGAAAGACTTTATAACTACCGTTAATTTTACTTCTTTCCAAATGACTTAA

Upstream 100 bases:

>100_bases
GGTGATGAATCACCATCAAGTGATGCCCTAAGAAGCCACTTGTACACCATAAGAAACGCCATTGATAAAGATTTTGATAT
TCCAAGACTAGAGACCATTC

Downstream 100 bases:

>100_bases
TCATTGAAAGAGTGTATCTCAAGTACTTTTGGTACACTCCTTATTTCCATAACACATATAATACGGACATCATTGTGAGC
AAAACAATTTCAACTTTATC

Product: two component sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MEKATDLNKGSQQPSFFKKIRWTFGILTFLMFGLFWAVIYIAEDQLEIISLHHWLDTEANQYIKKYAQLGEDTPLPNEDE
FSTYWSEREHPLWLNNYKKAGLYEQLLGTEDKHFIVSPHPSGKGLLYILFQDDADDYLDEYEANLHTLTLFLGTISTILM
ILYGIYFVRSISVPLRHIQHKVGLMSPEHPDFTIDTKYQETQEIERSLLESKHHIAQFFTREKEFSRFASHELRTPIMVI
QGSADLLAKVPNQPNVALKAINRLHQASEEMTLLTETFLLLGKQDIEAHHFHHYKIEDILKTQLNHLQPLFAKQEMGAQL
SIIEGEPCLAPSSFITVVINNLIKNAFSYSVGDIQIELNNNQLCITNCHDGNDTYNAGYGCGLVIVERICERMNWAFTIE
QTEKDFITTVNFTSFQMT

Sequences:

>Translated_418_residues
MEKATDLNKGSQQPSFFKKIRWTFGILTFLMFGLFWAVIYIAEDQLEIISLHHWLDTEANQYIKKYAQLGEDTPLPNEDE
FSTYWSEREHPLWLNNYKKAGLYEQLLGTEDKHFIVSPHPSGKGLLYILFQDDADDYLDEYEANLHTLTLFLGTISTILM
ILYGIYFVRSISVPLRHIQHKVGLMSPEHPDFTIDTKYQETQEIERSLLESKHHIAQFFTREKEFSRFASHELRTPIMVI
QGSADLLAKVPNQPNVALKAINRLHQASEEMTLLTETFLLLGKQDIEAHHFHHYKIEDILKTQLNHLQPLFAKQEMGAQL
SIIEGEPCLAPSSFITVVINNLIKNAFSYSVGDIQIELNNNQLCITNCHDGNDTYNAGYGCGLVIVERICERMNWAFTIE
QTEKDFITTVNFTSFQMT
>Mature_418_residues
MEKATDLNKGSQQPSFFKKIRWTFGILTFLMFGLFWAVIYIAEDQLEIISLHHWLDTEANQYIKKYAQLGEDTPLPNEDE
FSTYWSEREHPLWLNNYKKAGLYEQLLGTEDKHFIVSPHPSGKGLLYILFQDDADDYLDEYEANLHTLTLFLGTISTILM
ILYGIYFVRSISVPLRHIQHKVGLMSPEHPDFTIDTKYQETQEIERSLLESKHHIAQFFTREKEFSRFASHELRTPIMVI
QGSADLLAKVPNQPNVALKAINRLHQASEEMTLLTETFLLLGKQDIEAHHFHHYKIEDILKTQLNHLQPLFAKQEMGAQL
SIIEGEPCLAPSSFITVVINNLIKNAFSYSVGDIQIELNNNQLCITNCHDGNDTYNAGYGCGLVIVERICERMNWAFTIE
QTEKDFITTVNFTSFQMT

Specific function: Member of the two-component regulatory system ArlS/ArlR. ArlS probably functions as a sensor protein kinase which is autophosphorylated at a histidine residue and transfers its phosphate group to ArlR [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 48291; Mature: 48291

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKATDLNKGSQQPSFFKKIRWTFGILTFLMFGLFWAVIYIAEDQLEIISLHHWLDTEAN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHH
QYIKKYAQLGEDTPLPNEDEFSTYWSEREHPLWLNNYKKAGLYEQLLGTEDKHFIVSPHP
HHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCHHHHHHCCCCCEEEECCCC
SGKGLLYILFQDDADDYLDEYEANLHTLTLFLGTISTILMILYGIYFVRSISVPLRHIQH
CCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVGLMSPEHPDFTIDTKYQETQEIERSLLESKHHIAQFFTREKEFSRFASHELRTPIMVI
HHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
QGSADLLAKVPNQPNVALKAINRLHQASEEMTLLTETFLLLGKQDIEAHHFHHYKIEDIL
ECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHH
KTQLNHLQPLFAKQEMGAQLSIIEGEPCLAPSSFITVVINNLIKNAFSYSVGDIQIELNN
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC
NQLCITNCHDGNDTYNAGYGCGLVIVERICERMNWAFTIEQTEKDFITTVNFTSFQMT
CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECEEEEEC
>Mature Secondary Structure
MEKATDLNKGSQQPSFFKKIRWTFGILTFLMFGLFWAVIYIAEDQLEIISLHHWLDTEAN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHH
QYIKKYAQLGEDTPLPNEDEFSTYWSEREHPLWLNNYKKAGLYEQLLGTEDKHFIVSPHP
HHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCHHHHHHCCCCCEEEECCCC
SGKGLLYILFQDDADDYLDEYEANLHTLTLFLGTISTILMILYGIYFVRSISVPLRHIQH
CCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVGLMSPEHPDFTIDTKYQETQEIERSLLESKHHIAQFFTREKEFSRFASHELRTPIMVI
HHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
QGSADLLAKVPNQPNVALKAINRLHQASEEMTLLTETFLLLGKQDIEAHHFHHYKIEDIL
ECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHH
KTQLNHLQPLFAKQEMGAQLSIIEGEPCLAPSSFITVVINNLIKNAFSYSVGDIQIELNN
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC
NQLCITNCHDGNDTYNAGYGCGLVIVERICERMNWAFTIEQTEKDFITTVNFTSFQMT
CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA