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The map label for this gene is ycbX [H]

Identifier: 59713447

GI number: 59713447

Start: 295353

End: 296564

Strand: Reverse

Name: ycbX [H]

Synonym: VF_A0264

Alternate gene names: 59713447

Gene position: 296564-295353 (Counterclockwise)

Preceding gene: 59713448

Following gene: 59713446

Centisome position: 22.29

GC content: 38.45

Gene sequence:

>1212_bases
GTGTATCTCAAGTACTTTTGGTACACTCCTTATTTCCATAACACATATAATACGGACATCATTGTGAGCAAAACAATTTC
AACTTTATCTCAAATTAATATTTTCCCTGTTAAATCAATTGCTGGTGTATCTCAATCTAGCGCTTACGTTGAAAAGCAAG
GACTACAGTGTGACCGTCGCTTTATGGTTACCGACCCTAATGGCAAAATGATCACCGCTCGCACTCATCCTCAAATGGTT
AAAATCAGTGCGATCATTGAACCTGATGGCCTAATTCTTTGCTATCCAGGATTAATTGATTTGCATCTCACTTTCAATGA
ATTAGAGATGAAGCAGACAGAAGCAAAAGTATGGAATGACTCTTTTTCTGCCTACTCAACGAATCAAGAAGCTAATCAAT
GGTTCTCTTCAATTTTATCAACAGATGCGCAATTACTTTATACTGGTGAGCAATCAAATCGTATCCGTGAAAAAATCCAA
ACAAACGTGAGCTTTGCCGATGGTTATCCATTGCTTGTCATTAGCGAAGCCTCTCTTGCAGAACTAAATAAGCGCAGTAG
TAGCCATCATACAATGTCGCAATTTCGCACAAACTTAGTGATTTCTGGTGATGATGCTTTTATTGAAGATTCTTGGAAGC
GTATTCGCATTGGTGAAGTCGAATTTGAAATAGTAAAACCTTGCCAACGTTGCATTTTAACAACAGTAAACCCAAGAACG
GCACAATATCACCCAGATAAAGAACCTTTAAAAACGTTCTCAACTTTCCGCGCTGATGAAAGTGGCAATGTGTATTTTGG
GCAAAACCTCATTGCCAAAAATGAAGGCACAATTAAGCTAGGTGATAAGATTGAGGTTTTAGAAAGTAAAGAAAAAGAAT
TTTACCTTGATTCTAGCTCTGAAGCACTAGAGGAAAAAGCAATCACACACACAAGTAAAAAACCGGATACTCCAGAAGAA
ATCACTATCAGCTTAAATGGTCACTTATTCACGGGTAATACGGAGCAACCGCTCCTTATGCAAGTCGAAGAGGCAGGATT
AAGCATAAATAACAGCTGTCGTGCCGGTTTATGTGGTGCTTGTCGAGTAACATTAGAATCAGGAGAGGTTGAGCAAGAAG
ATTCCCCAGCTCTTAATCAAAAATTAAAAGAGGCAGGAATGATACTGGCTTGTTGCTCTGTTCCTAAAACAGATGTTGAA
ATAGTTGATTAA

Upstream 100 bases:

>100_bases
GTGAAAGAATGAACTGGGCATTCACCATAGAACAAACAGAGAAAGACTTTATAACTACCGTTAATTTTACTTCTTTCCAA
ATGACTTAATCATTGAAAGA

Downstream 100 bases:

>100_bases
CTCTTAATAAAACGGTGCTAATAATACAGCACCGTTTTTACTTTACTAAGTCCTGACTCTTCTGAAAATAGCCCTAGGCG
ACACTTACGCTCTCAGTTAC

Product: 2Fe-2S cluster-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MYLKYFWYTPYFHNTYNTDIIVSKTISTLSQINIFPVKSIAGVSQSSAYVEKQGLQCDRRFMVTDPNGKMITARTHPQMV
KISAIIEPDGLILCYPGLIDLHLTFNELEMKQTEAKVWNDSFSAYSTNQEANQWFSSILSTDAQLLYTGEQSNRIREKIQ
TNVSFADGYPLLVISEASLAELNKRSSSHHTMSQFRTNLVISGDDAFIEDSWKRIRIGEVEFEIVKPCQRCILTTVNPRT
AQYHPDKEPLKTFSTFRADESGNVYFGQNLIAKNEGTIKLGDKIEVLESKEKEFYLDSSSEALEEKAITHTSKKPDTPEE
ITISLNGHLFTGNTEQPLLMQVEEAGLSINNSCRAGLCGACRVTLESGEVEQEDSPALNQKLKEAGMILACCSVPKTDVE
IVD

Sequences:

>Translated_403_residues
MYLKYFWYTPYFHNTYNTDIIVSKTISTLSQINIFPVKSIAGVSQSSAYVEKQGLQCDRRFMVTDPNGKMITARTHPQMV
KISAIIEPDGLILCYPGLIDLHLTFNELEMKQTEAKVWNDSFSAYSTNQEANQWFSSILSTDAQLLYTGEQSNRIREKIQ
TNVSFADGYPLLVISEASLAELNKRSSSHHTMSQFRTNLVISGDDAFIEDSWKRIRIGEVEFEIVKPCQRCILTTVNPRT
AQYHPDKEPLKTFSTFRADESGNVYFGQNLIAKNEGTIKLGDKIEVLESKEKEFYLDSSSEALEEKAITHTSKKPDTPEE
ITISLNGHLFTGNTEQPLLMQVEEAGLSINNSCRAGLCGACRVTLESGEVEQEDSPALNQKLKEAGMILACCSVPKTDVE
IVD
>Mature_403_residues
MYLKYFWYTPYFHNTYNTDIIVSKTISTLSQINIFPVKSIAGVSQSSAYVEKQGLQCDRRFMVTDPNGKMITARTHPQMV
KISAIIEPDGLILCYPGLIDLHLTFNELEMKQTEAKVWNDSFSAYSTNQEANQWFSSILSTDAQLLYTGEQSNRIREKIQ
TNVSFADGYPLLVISEASLAELNKRSSSHHTMSQFRTNLVISGDDAFIEDSWKRIRIGEVEFEIVKPCQRCILTTVNPRT
AQYHPDKEPLKTFSTFRADESGNVYFGQNLIAKNEGTIKLGDKIEVLESKEKEFYLDSSSEALEEKAITHTSKKPDTPEE
ITISLNGHLFTGNTEQPLLMQVEEAGLSINNSCRAGLCGACRVTLESGEVEQEDSPALNQKLKEAGMILACCSVPKTDVE
IVD

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=282, Percent_Identity=35.1063829787234, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI31542713, Length=279, Percent_Identity=32.6164874551971, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI157388923, Length=239, Percent_Identity=23.8493723849372, Blast_Score=86, Evalue=8e-17,
Organism=Escherichia coli, GI1787179, Length=378, Percent_Identity=41.5343915343915, Blast_Score=300, Evalue=1e-82,
Organism=Caenorhabditis elegans, GI17540702, Length=281, Percent_Identity=29.1814946619217, Blast_Score=120, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI17561286, Length=286, Percent_Identity=29.020979020979, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI71990971, Length=291, Percent_Identity=28.5223367697594, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI25147498, Length=217, Percent_Identity=28.110599078341, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI45550400, Length=306, Percent_Identity=30.0653594771242, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI17647607, Length=247, Percent_Identity=27.5303643724696, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 45264; Mature: 45264

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLKYFWYTPYFHNTYNTDIIVSKTISTLSQINIFPVKSIAGVSQSSAYVEKQGLQCDRR
CEEEEEEECCEECCCCCCCEEEEHHHHHHHHCEEEECHHHCCCCCCHHHHHHCCCCCCCE
FMVTDPNGKMITARTHPQMVKISAIIEPDGLILCYPGLIDLHLTFNELEMKQTEAKVWND
EEEECCCCCEEEEECCCCEEEEEEEECCCCEEEEECCEEEEEEEHHHHHHHHHHHHHHCC
SFSAYSTNQEANQWFSSILSTDAQLLYTGEQSNRIREKIQTNVSFADGYPLLVISEASLA
CCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCEECCCCCEEEECCCHHH
ELNKRSSSHHTMSQFRTNLVISGDDAFIEDSWKRIRIGEVEFEIVKPCQRCILTTVNPRT
HHHHCCCCHHHHHHHHCEEEEECCCCEECCCCCEEEECCEEHHHHHHHHHHEEEECCCCC
AQYHPDKEPLKTFSTFRADESGNVYFGQNLIAKNEGTIKLGDKIEVLESKEKEFYLDSSS
CCCCCCHHHHHHHHHHCCCCCCCEEECCCEEECCCCCEEECCEEEEECCCCCEEEECCCH
EALEEKAITHTSKKPDTPEEITISLNGHLFTGNTEQPLLMQVEEAGLSINNSCRAGLCGA
HHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEE
CRVTLESGEVEQEDSPALNQKLKEAGMILACCSVPKTDVEIVD
EEEEEECCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCEEEEC
>Mature Secondary Structure
MYLKYFWYTPYFHNTYNTDIIVSKTISTLSQINIFPVKSIAGVSQSSAYVEKQGLQCDRR
CEEEEEEECCEECCCCCCCEEEEHHHHHHHHCEEEECHHHCCCCCCHHHHHHCCCCCCCE
FMVTDPNGKMITARTHPQMVKISAIIEPDGLILCYPGLIDLHLTFNELEMKQTEAKVWND
EEEECCCCCEEEEECCCCEEEEEEEECCCCEEEEECCEEEEEEEHHHHHHHHHHHHHHCC
SFSAYSTNQEANQWFSSILSTDAQLLYTGEQSNRIREKIQTNVSFADGYPLLVISEASLA
CCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCEECCCCCEEEECCCHHH
ELNKRSSSHHTMSQFRTNLVISGDDAFIEDSWKRIRIGEVEFEIVKPCQRCILTTVNPRT
HHHHCCCCHHHHHHHHCEEEEECCCCEECCCCCEEEECCEEHHHHHHHHHHEEEECCCCC
AQYHPDKEPLKTFSTFRADESGNVYFGQNLIAKNEGTIKLGDKIEVLESKEKEFYLDSSS
CCCCCCHHHHHHHHHHCCCCCCCEEECCCEEECCCCCEEECCEEEEECCCCCEEEECCCH
EALEEKAITHTSKKPDTPEEITISLNGHLFTGNTEQPLLMQVEEAGLSINNSCRAGLCGA
HHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEE
CRVTLESGEVEQEDSPALNQKLKEAGMILACCSVPKTDVEIVD
EEEEEECCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]