| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713446
Identifier: 59713446
GI number: 59713446
Start: 294813
End: 295220
Strand: Reverse
Name: 59713446
Synonym: VF_A0263
Alternate gene names: NA
Gene position: 295220-294813 (Counterclockwise)
Preceding gene: 59713447
Following gene: 59713445
Centisome position: 22.19
GC content: 38.48
Gene sequence:
>408_bases ATGTCAGATCAAGAAGAATTTGAAGTTGAAGCCATTGGTGTTGAAGTGAATGTTCAACCTATCGAGCTATATAAAGTCCT AAAAATTGCTAACGTTGTTAGTGGTGGCGGTGAAGCTAAACATGTTATTGGCGAAGGCTATGTTGGCGTTAATGGTGAAC TAGAACAACGTAAACGTCGAAAAATGTATGATGGCGATGTCATTGAATTCAATGAAGAATACTACGTTGTAATTTGTGAC ACTCCTGTTGGTGAGCTACCTGAAATTGAAGAAAATCCTCAACCAGCTCAAATCGAACCTGAGTATTCAGCTCCAAAGAC CAAAAAAACTAAGAAGAAAAAACAAAAACAAGATCAACCAACCACCGTTGATCCTGAGAGTGGTCGTCGCTCAATTAACT TCTTCTAA
Upstream 100 bases:
>100_bases CGTTTTTACTTTACTAAGTCCTGACTCTTCTGAAAATAGCCCTAGGCGACACTTACGCTCTCAGTTACAATATGTGTAAT TGCTAATCATAGAGATCCTC
Downstream 100 bases:
>100_bases AAATTAGGCTCAATATCATTAATATTGAGCCGACTCCTCTTCAATCCACCTATTATTACACTCACGTAAAAGTAATTAAT TCTATTAGCTATTATCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSDQEEFEVEAIGVEVNVQPIELYKVLKIANVVSGGGEAKHVIGEGYVGVNGELEQRKRRKMYDGDVIEFNEEYYVVICD TPVGELPEIEENPQPAQIEPEYSAPKTKKTKKKKQKQDQPTTVDPESGRRSINFF
Sequences:
>Translated_135_residues MSDQEEFEVEAIGVEVNVQPIELYKVLKIANVVSGGGEAKHVIGEGYVGVNGELEQRKRRKMYDGDVIEFNEEYYVVICD TPVGELPEIEENPQPAQIEPEYSAPKTKKTKKKKQKQDQPTTVDPESGRRSINFF >Mature_134_residues SDQEEFEVEAIGVEVNVQPIELYKVLKIANVVSGGGEAKHVIGEGYVGVNGELEQRKRRKMYDGDVIEFNEEYYVVICDT PVGELPEIEENPQPAQIEPEYSAPKTKKTKKKKQKQDQPTTVDPESGRRSINFF
Specific function: Unknown
COG id: COG2501
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15274; Mature: 15143
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS50889 S4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQEEFEVEAIGVEVNVQPIELYKVLKIANVVSGGGEAKHVIGEGYVGVNGELEQRKRR CCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCCHHHHHHH KMYDGDVIEFNEEYYVVICDTPVGELPEIEENPQPAQIEPEYSAPKTKKTKKKKQKQDQP HCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCC TTVDPESGRRSINFF CCCCCCCCCEEECCC >Mature Secondary Structure SDQEEFEVEAIGVEVNVQPIELYKVLKIANVVSGGGEAKHVIGEGYVGVNGELEQRKRR CCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCCHHHHHHH KMYDGDVIEFNEEYYVVICDTPVGELPEIEENPQPAQIEPEYSAPKTKKTKKKKQKQDQP HCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCC TTVDPESGRRSINFF CCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA