| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59713106
Identifier: 59713106
GI number: 59713106
Start: 2801978
End: 2803546
Strand: Direct
Name: 59713106
Synonym: VF_2499
Alternate gene names: NA
Gene position: 2801978-2803546 (Clockwise)
Preceding gene: 59713105
Following gene: 59713108
Centisome position: 96.7
GC content: 37.35
Gene sequence:
>1569_bases ATGAAAAAAAAAGCACTCATTCTATTATCAATAAGTACTATTGCTTTAAGTGGTTTTTGGTTGCGCTCTGCTATTTCGTC ACCATCCGAACATACCGTGATAGCAGAACCAATTCCATTACCAACAATACAAAACACGCCATCTCGTGAAGCATTTTTAT CTAGCTTTCATAAAGAAAAAACACAGCTAAATACAGCGCCAAAAAAGGAACGAGATAATGATGAAACTACAGAGTATTCA GAGAAAATAAATACTCGAAAAACATCGCCTCAAGAAGATAGAGAAGCTGATTTAGAATATAACGCAGATAAAGTACAAAG CCTCCCACAGTTGAGCTCGACTCAAAAAACAGGAAGTGTTGGCAACCAAAAACCCAAAGTGGATAACGACATACAGCAGC AGTTACAAACCATGATGTATGCGTGGAATTTAACGCAATCCACACCGGTAAATTATTCATTTAATATCAACGGTCTTTTT TATGATGAGGAGCATGACTTTATTACCACGAGAGTTCGCTTCTCTTATCCAGGACTTTCTTTAATCAATAGAGGCGAGCT AACCTTAGTTGGTTCCCCTATCGAAAGTGATAAACCAACTCAATTCATTATTTCGGCAAAAGATGACTATCATGGAAATA AAGAAAGTGCATGGACTCATGTAAGCTTTGATTTACCCTCAACAGAAGAGTCAAACTCAAGCGTTGAACACCCATTAATT GGGCATACCCTTTATCGATTAGAAACAACAAATCATTTTGCTGGCCATAGCTATGAGTATGAAGTTGTTTATTGTGAGGC ATTTAAATTCATTAATAACCTCGCTTATTATGCGGCTTCAACCAATAAAAGAACCTGCCCTACAGAAGAATCGTTATCCG AAGTCGGTACCTATGCCATTGATGACAAACACCTCATTGTAACAAGCAGCTATTCAGCTTTTGATGCAGAGCAACGTTGG AAAATACTGCATTCCTATGAATCTAGCTTTAATAAAGGTGAAAGCCTACTTACCACGATTCATAATGGAAAAGAGTTTGA GACCTACACAATATTAAAAAATAAACGAGCAATGGAATCTCGTTTAAATGTCGTTACTGGGCAAACCCCTTATCAAATGG AAAAATTTGAATATTTCTTCCCTACAGATAAGCAAGGAAACTACATTAAAGGCACTGCGGGAATGTATATGATGGACTCT AGATTAGTTAATCCAAACTGGTTCAGCCTAGATTCTGATCTCAATATTCATTCGGATACGCATAACATGACGTGTGATTT TGTTGTCGCTTTTTATCAAAGTTCAACCATGGGTGGTCAAGGAGCAAGTGGTATAAGTATAACGTCGAGTTCCGTAGCCC CTAACTATATTGACCCACTAGAATGCGAAGAAAGAATTAACCCAAATAATGGCAAACGCTATGCGTATCTTGACTTAGAT TACTCACCTTATGATGAGTTTGTTGATGGGGGGATCTATAGCTACATTTTAAAACCCAAACCAGAATACGCTCATTTAGT GGAAGAGTTTAAAGTTAACCTAATCTATCACGCTCCAAATTTAAGCTAA
Upstream 100 bases:
>100_bases CAATGAAATTTGCCAACTTTTAGAATGCAGCTCAAGCCTAATAGAGAAAGATTTAAAATTCTCTCGCAGCTGGCTTCAAA CTCGTATGATGTAATTACTA
Downstream 100 bases:
>100_bases AAAAATCATAGAGATAAATAAAAAAAGAGCGAAGTGTGTCGCTCTTTTTTGTTTGGCCTATGATAGGCTAAAAACTCCAG AGTGCCTGTAAACCAGTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MKKKALILLSISTIALSGFWLRSAISSPSEHTVIAEPIPLPTIQNTPSREAFLSSFHKEKTQLNTAPKKERDNDETTEYS EKINTRKTSPQEDREADLEYNADKVQSLPQLSSTQKTGSVGNQKPKVDNDIQQQLQTMMYAWNLTQSTPVNYSFNINGLF YDEEHDFITTRVRFSYPGLSLINRGELTLVGSPIESDKPTQFIISAKDDYHGNKESAWTHVSFDLPSTEESNSSVEHPLI GHTLYRLETTNHFAGHSYEYEVVYCEAFKFINNLAYYAASTNKRTCPTEESLSEVGTYAIDDKHLIVTSSYSAFDAEQRW KILHSYESSFNKGESLLTTIHNGKEFETYTILKNKRAMESRLNVVTGQTPYQMEKFEYFFPTDKQGNYIKGTAGMYMMDS RLVNPNWFSLDSDLNIHSDTHNMTCDFVVAFYQSSTMGGQGASGISITSSSVAPNYIDPLECEERINPNNGKRYAYLDLD YSPYDEFVDGGIYSYILKPKPEYAHLVEEFKVNLIYHAPNLS
Sequences:
>Translated_522_residues MKKKALILLSISTIALSGFWLRSAISSPSEHTVIAEPIPLPTIQNTPSREAFLSSFHKEKTQLNTAPKKERDNDETTEYS EKINTRKTSPQEDREADLEYNADKVQSLPQLSSTQKTGSVGNQKPKVDNDIQQQLQTMMYAWNLTQSTPVNYSFNINGLF YDEEHDFITTRVRFSYPGLSLINRGELTLVGSPIESDKPTQFIISAKDDYHGNKESAWTHVSFDLPSTEESNSSVEHPLI GHTLYRLETTNHFAGHSYEYEVVYCEAFKFINNLAYYAASTNKRTCPTEESLSEVGTYAIDDKHLIVTSSYSAFDAEQRW KILHSYESSFNKGESLLTTIHNGKEFETYTILKNKRAMESRLNVVTGQTPYQMEKFEYFFPTDKQGNYIKGTAGMYMMDS RLVNPNWFSLDSDLNIHSDTHNMTCDFVVAFYQSSTMGGQGASGISITSSSVAPNYIDPLECEERINPNNGKRYAYLDLD YSPYDEFVDGGIYSYILKPKPEYAHLVEEFKVNLIYHAPNLS >Mature_522_residues MKKKALILLSISTIALSGFWLRSAISSPSEHTVIAEPIPLPTIQNTPSREAFLSSFHKEKTQLNTAPKKERDNDETTEYS EKINTRKTSPQEDREADLEYNADKVQSLPQLSSTQKTGSVGNQKPKVDNDIQQQLQTMMYAWNLTQSTPVNYSFNINGLF YDEEHDFITTRVRFSYPGLSLINRGELTLVGSPIESDKPTQFIISAKDDYHGNKESAWTHVSFDLPSTEESNSSVEHPLI GHTLYRLETTNHFAGHSYEYEVVYCEAFKFINNLAYYAASTNKRTCPTEESLSEVGTYAIDDKHLIVTSSYSAFDAEQRW KILHSYESSFNKGESLLTTIHNGKEFETYTILKNKRAMESRLNVVTGQTPYQMEKFEYFFPTDKQGNYIKGTAGMYMMDS RLVNPNWFSLDSDLNIHSDTHNMTCDFVVAFYQSSTMGGQGASGISITSSSVAPNYIDPLECEERINPNNGKRYAYLDLD YSPYDEFVDGGIYSYILKPKPEYAHLVEEFKVNLIYHAPNLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59348; Mature: 59348
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKALILLSISTIALSGFWLRSAISSPSEHTVIAEPIPLPTIQNTPSREAFLSSFHKEK CCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH TQLNTAPKKERDNDETTEYSEKINTRKTSPQEDREADLEYNADKVQSLPQLSSTQKTGSV HHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCCCCCCC GNQKPKVDNDIQQQLQTMMYAWNLTQSTPVNYSFNINGLFYDEEHDFITTRVRFSYPGLS CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEECCCCCEEEEEEEEECCCCC LINRGELTLVGSPIESDKPTQFIISAKDDYHGNKESAWTHVSFDLPSTEESNSSVEHPLI EECCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC GHTLYRLETTNHFAGHSYEYEVVYCEAFKFINNLAYYAASTNKRTCPTEESLSEVGTYAI CCEEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHCCEEE DDKHLIVTSSYSAFDAEQRWKILHSYESSFNKGESLLTTIHNGKEFETYTILKNKRAMES CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCHHHHH RLNVVTGQTPYQMEKFEYFFPTDKQGNYIKGTAGMYMMDSRLVNPNWFSLDSDLNIHSDT HCCEEECCCCCCCCCEEEECCCCCCCCEEECCCCEEEECCEECCCCCEEECCCCEEECCC HNMTCDFVVAFYQSSTMGGQGASGISITSSSVAPNYIDPLECEERINPNNGKRYAYLDLD CCCEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEEEEEECC YSPYDEFVDGGIYSYILKPKPEYAHLVEEFKVNLIYHAPNLS CCCHHHHHCCCEEEEEECCCCHHHHHHHHCEEEEEEECCCCC >Mature Secondary Structure MKKKALILLSISTIALSGFWLRSAISSPSEHTVIAEPIPLPTIQNTPSREAFLSSFHKEK CCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH TQLNTAPKKERDNDETTEYSEKINTRKTSPQEDREADLEYNADKVQSLPQLSSTQKTGSV HHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCCCCCCC GNQKPKVDNDIQQQLQTMMYAWNLTQSTPVNYSFNINGLFYDEEHDFITTRVRFSYPGLS CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEECCCCCEEEEEEEEECCCCC LINRGELTLVGSPIESDKPTQFIISAKDDYHGNKESAWTHVSFDLPSTEESNSSVEHPLI EECCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC GHTLYRLETTNHFAGHSYEYEVVYCEAFKFINNLAYYAASTNKRTCPTEESLSEVGTYAI CCEEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHCCEEE DDKHLIVTSSYSAFDAEQRWKILHSYESSFNKGESLLTTIHNGKEFETYTILKNKRAMES CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCHHHHH RLNVVTGQTPYQMEKFEYFFPTDKQGNYIKGTAGMYMMDSRLVNPNWFSLDSDLNIHSDT HCCEEECCCCCCCCCEEEECCCCCCCCEEECCCCEEEECCEECCCCCEEECCCCEEECCC HNMTCDFVVAFYQSSTMGGQGASGISITSSSVAPNYIDPLECEERINPNNGKRYAYLDLD CCCEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEEEEEECC YSPYDEFVDGGIYSYILKPKPEYAHLVEEFKVNLIYHAPNLS CCCHHHHHCCCEEEEEECCCCHHHHHHHHCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA