Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

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The map label for this gene is 59713108

Identifier: 59713108

GI number: 59713108

Start: 2804705

End: 2807476

Strand: Direct

Name: 59713108

Synonym: VF_2501

Alternate gene names: NA

Gene position: 2804705-2807476 (Clockwise)

Preceding gene: 59713106

Following gene: 59713109

Centisome position: 96.8

GC content: 35.68

Gene sequence:

>2772_bases
ATGAAAAAGGTAAGTTTATTAGCAGCGTCAGTGGCACTAGCGTTAGTAGGTTGTGGCGGTTCTGATGGTGGTTCAGACAC
CAATACAGGTACACCTTCAGCTGGCGGTATTGTTATTACTGGTTTTGATGGCTACTTTAAGAATGCGGTTGTGTTTGATG
ACATGCCTGTAGCAACACGTACATCAACAGTTGGCAAACTAGATTCTAACGATACTATTTTTGGTTTAACTGATGGAAAT
GGTAAAATTACTCTTCCAAAAAATACTGAAATTAAAGGTACTCTGAGTTTACAAACCATTACTCCTAATGGCGATGTACA
AAAGATGCTGATCGCTCGTGATCCAAGTAAATTTGCTGGCATCTATACCATTGATATGGATCATCCAACTCAAGCAATGG
CACACGAAGTTTCTTTCCGTACTCTTTCTGGTGAGAAAATCATCTCTCCTTTAACAGACCTTGTAGCAGCCAAAGCAGGT
ACAAATCCAACACCAGCTCAAATCAAACAAGCTAAAAAAGAAGTAAATACAGCTCTTGGATTGGATGAAGAAAACACTGA
TGTATTTTCTGATGTCATTGCTGCTGGCGATCATGCTCTACACAAAACAGCACAAATCTTAACTGAATCAAAAGTAGAAG
CTGGTAATAACTATACGCCAACAGCAGCTATCGCTATTGCCGAAAAAGCGACAGAAATAGTAAAAGATCCTGAAAATGCA
GATAAACTTGATCAACCTAACTTCAAACCAACGATTCCTGTAGACAATACAGGAACAGTCGGTGAAGTGATTATTAATAA
TAAGTTAGTCGTTAGCAAAACTATTTATGACAACCTTATCAAACAAGTAAATAGCGCAGATAAATTTACTGATGTTACAG
AAATTTCTCTAATCGATTTACCTATCGCTGAACTATTTGTAGATGCTGATAATAAAAATGAAATTATCCCAGAAGTAAAA
ATCAGTACCGTAAATGGTAGCGATGTTACTGCAGAATTTAACATTACTAAAACAGCGACAGAGTTAACTATTTCAGCAAA
AAATATCACAACTGTACGTGATACTTATATTGTGACATTAAGCTCTACAGATATTGCTGTTAATGATAAAAACATGGGGG
TAGTTAGTACGACTTTTAAAATCAAAGTTGATCTAGAAAATTCAGCACCAACATTAAACCTACAAGTTAAAAATACATTA
CAAGAGTGGTTAGGAAGTTTAGAACTACAACAAAATGTTGCTGTATTTGATGAAAAAATGCGTATCAGCGACTTATTTGA
AGATGAAGACAAGTTAACTTATAGCGTTTATAGCTCTGTTGCAGGTTTAGAGTTTGCACTTGCTCCTTTTAATGATGGCG
GTACTGAACTTGAAATATTAGGTAAGCCAAATCATGCGTACCCAGCAGGTGAAACGATTACAATTTCTGCGACTGATGGT
ATTAATACTGTTTATGAAGAATTTACATTAGCTGCAATTGCAGAAGCCGGCATTACGATTAATGAAATCAAATATGTGGC
ACTACAAGAAAAAATTACTGATATAACCTTGAAAAAAGGTACCCCTATAATAGAGGCTCAATTAAATATTACAGAACTGT
TCAATACTGAAAGCGTAAACGGCTTAGGTGCTATTGAATATTATGCAGGCTTAGAAGATAAAGCTCCTGGACCTAATGGT
GAGAACCTTCATGAAGGTTTCACTACTGTAGATGGTGTTAACGTTAATGTTGATACTAATGGCACCCTTACTATTTATGG
TGAACCAAACGAGATTATTAAAGGTGGTTACTTCTACCTTATGGCAGGTGTAAATGGTGACACCTCAGACGAAATTTCAT
CTAAAATGGTGAAAATAACTTTATCTGATGTTCAACCTGCGGATGGTGGCGAAATAATTCCACCAGAGACAAGCCTTAAC
CTACAAGATAAATATTTATATAAAATAGAAAGCGGCAATTTCAATGGCGTATCGGGTCTATTCTGTGACATTCGCTATTA
TGATTCTTCTAATAAAAAGTTCTATATGAATATAAGAACAGAAATCAATAAAGAACTTTGTACTGTTGTGAACACAACTC
TTTCACCAAGCAACCAACCAGAATTATTTGAAGAAGTTGCTGAATATACACTTCAAAATGGAATTTTCACTTTTAGTTAT
AATGATGGTTCTGAGCAATTTACAACCACTCATTCACCTTTACAATTTGATATAGGTTATGACTCTCAAGTATCACCATT
TAGCCACTATGTTGTTAGAGCTAATGAGGTTGGGATCGATAATGATGGTGAATATGAAAGTGCTGAACTTTACTCTCTAT
ATCTTGGAGCAGAGGCCGTTGAGGAGGTTATTGCAGTAAAAACTACCCATCAAAGCGGCAACGACCATACAACTGAACCA
TCAAACTTCAGAAATCAAATGATACATTACACAGATAACAATGAAGTGTCTGAATTCAAAGTCGAAGCTCAAATGCGATC
TTTGGATTTCTGTGATGGAACGTTAGAAGGCTCAATGTGCGAACAAGGTTTGGCTGATGCTGACCTTATTATCAAAGATA
TGAGCTGTTCTGAATTTCAAAAAGCCTACAACACTCCATATGTGAACGGTGAATACTTCATTAATGAAGGTTATATTGAA
AACGGTATTAATAAGTGTGGCATCGATTTTTATAGTGAGAGTGCTATTACATCAGGATTTTATACTTTCCGAGCTTCACC
TAAAAATGAAAATACTCATGAAGAAATTAACTTCAGTTTCAAAAAAGACTAA

Upstream 100 bases:

>100_bases
TTTTTTGAACCGGCGTAAAAGTGTCGCACTTTTGAGTTTTACAAATAAATAAACATGTATTGAGGGAAAGGCTACCCTCA
TCAAAAAGGATTGAGACAGA

Downstream 100 bases:

>100_bases
ATGTGATTAACTAACAAAAAACCCCGGTACTCGCCGGGGTTTATTTTATCTCTCCCCACCGCCACTTCCATTTAAAACCT
TACTCACATCACAAAAAACT

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 923; Mature: 923

Protein sequence:

>923_residues
MKKVSLLAASVALALVGCGGSDGGSDTNTGTPSAGGIVITGFDGYFKNAVVFDDMPVATRTSTVGKLDSNDTIFGLTDGN
GKITLPKNTEIKGTLSLQTITPNGDVQKMLIARDPSKFAGIYTIDMDHPTQAMAHEVSFRTLSGEKIISPLTDLVAAKAG
TNPTPAQIKQAKKEVNTALGLDEENTDVFSDVIAAGDHALHKTAQILTESKVEAGNNYTPTAAIAIAEKATEIVKDPENA
DKLDQPNFKPTIPVDNTGTVGEVIINNKLVVSKTIYDNLIKQVNSADKFTDVTEISLIDLPIAELFVDADNKNEIIPEVK
ISTVNGSDVTAEFNITKTATELTISAKNITTVRDTYIVTLSSTDIAVNDKNMGVVSTTFKIKVDLENSAPTLNLQVKNTL
QEWLGSLELQQNVAVFDEKMRISDLFEDEDKLTYSVYSSVAGLEFALAPFNDGGTELEILGKPNHAYPAGETITISATDG
INTVYEEFTLAAIAEAGITINEIKYVALQEKITDITLKKGTPIIEAQLNITELFNTESVNGLGAIEYYAGLEDKAPGPNG
ENLHEGFTTVDGVNVNVDTNGTLTIYGEPNEIIKGGYFYLMAGVNGDTSDEISSKMVKITLSDVQPADGGEIIPPETSLN
LQDKYLYKIESGNFNGVSGLFCDIRYYDSSNKKFYMNIRTEINKELCTVVNTTLSPSNQPELFEEVAEYTLQNGIFTFSY
NDGSEQFTTTHSPLQFDIGYDSQVSPFSHYVVRANEVGIDNDGEYESAELYSLYLGAEAVEEVIAVKTTHQSGNDHTTEP
SNFRNQMIHYTDNNEVSEFKVEAQMRSLDFCDGTLEGSMCEQGLADADLIIKDMSCSEFQKAYNTPYVNGEYFINEGYIE
NGINKCGIDFYSESAITSGFYTFRASPKNENTHEEINFSFKKD

Sequences:

>Translated_923_residues
MKKVSLLAASVALALVGCGGSDGGSDTNTGTPSAGGIVITGFDGYFKNAVVFDDMPVATRTSTVGKLDSNDTIFGLTDGN
GKITLPKNTEIKGTLSLQTITPNGDVQKMLIARDPSKFAGIYTIDMDHPTQAMAHEVSFRTLSGEKIISPLTDLVAAKAG
TNPTPAQIKQAKKEVNTALGLDEENTDVFSDVIAAGDHALHKTAQILTESKVEAGNNYTPTAAIAIAEKATEIVKDPENA
DKLDQPNFKPTIPVDNTGTVGEVIINNKLVVSKTIYDNLIKQVNSADKFTDVTEISLIDLPIAELFVDADNKNEIIPEVK
ISTVNGSDVTAEFNITKTATELTISAKNITTVRDTYIVTLSSTDIAVNDKNMGVVSTTFKIKVDLENSAPTLNLQVKNTL
QEWLGSLELQQNVAVFDEKMRISDLFEDEDKLTYSVYSSVAGLEFALAPFNDGGTELEILGKPNHAYPAGETITISATDG
INTVYEEFTLAAIAEAGITINEIKYVALQEKITDITLKKGTPIIEAQLNITELFNTESVNGLGAIEYYAGLEDKAPGPNG
ENLHEGFTTVDGVNVNVDTNGTLTIYGEPNEIIKGGYFYLMAGVNGDTSDEISSKMVKITLSDVQPADGGEIIPPETSLN
LQDKYLYKIESGNFNGVSGLFCDIRYYDSSNKKFYMNIRTEINKELCTVVNTTLSPSNQPELFEEVAEYTLQNGIFTFSY
NDGSEQFTTTHSPLQFDIGYDSQVSPFSHYVVRANEVGIDNDGEYESAELYSLYLGAEAVEEVIAVKTTHQSGNDHTTEP
SNFRNQMIHYTDNNEVSEFKVEAQMRSLDFCDGTLEGSMCEQGLADADLIIKDMSCSEFQKAYNTPYVNGEYFINEGYIE
NGINKCGIDFYSESAITSGFYTFRASPKNENTHEEINFSFKKD
>Mature_923_residues
MKKVSLLAASVALALVGCGGSDGGSDTNTGTPSAGGIVITGFDGYFKNAVVFDDMPVATRTSTVGKLDSNDTIFGLTDGN
GKITLPKNTEIKGTLSLQTITPNGDVQKMLIARDPSKFAGIYTIDMDHPTQAMAHEVSFRTLSGEKIISPLTDLVAAKAG
TNPTPAQIKQAKKEVNTALGLDEENTDVFSDVIAAGDHALHKTAQILTESKVEAGNNYTPTAAIAIAEKATEIVKDPENA
DKLDQPNFKPTIPVDNTGTVGEVIINNKLVVSKTIYDNLIKQVNSADKFTDVTEISLIDLPIAELFVDADNKNEIIPEVK
ISTVNGSDVTAEFNITKTATELTISAKNITTVRDTYIVTLSSTDIAVNDKNMGVVSTTFKIKVDLENSAPTLNLQVKNTL
QEWLGSLELQQNVAVFDEKMRISDLFEDEDKLTYSVYSSVAGLEFALAPFNDGGTELEILGKPNHAYPAGETITISATDG
INTVYEEFTLAAIAEAGITINEIKYVALQEKITDITLKKGTPIIEAQLNITELFNTESVNGLGAIEYYAGLEDKAPGPNG
ENLHEGFTTVDGVNVNVDTNGTLTIYGEPNEIIKGGYFYLMAGVNGDTSDEISSKMVKITLSDVQPADGGEIIPPETSLN
LQDKYLYKIESGNFNGVSGLFCDIRYYDSSNKKFYMNIRTEINKELCTVVNTTLSPSNQPELFEEVAEYTLQNGIFTFSY
NDGSEQFTTTHSPLQFDIGYDSQVSPFSHYVVRANEVGIDNDGEYESAELYSLYLGAEAVEEVIAVKTTHQSGNDHTTEP
SNFRNQMIHYTDNNEVSEFKVEAQMRSLDFCDGTLEGSMCEQGLADADLIIKDMSCSEFQKAYNTPYVNGEYFINEGYIE
NGINKCGIDFYSESAITSGFYTFRASPKNENTHEEINFSFKKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100420; Mature: 100420

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVSLLAASVALALVGCGGSDGGSDTNTGTPSAGGIVITGFDGYFKNAVVFDDMPVATR
CCCHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHCCEEEECCCCCCCC
TSTVGKLDSNDTIFGLTDGNGKITLPKNTEIKGTLSLQTITPNGDVQKMLIARDPSKFAG
CCCCCCCCCCCEEEEEECCCCEEECCCCCCEEEEEEEEEECCCCCCEEEEEECCCCHHEE
IYTIDMDHPTQAMAHEVSFRTLSGEKIISPLTDLVAAKAGTNPTPAQIKQAKKEVNTALG
EEEEECCCCHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
LDEENTDVFSDVIAAGDHALHKTAQILTESKVEAGNNYTPTAAIAIAEKATEIVKDPENA
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHCCCCCC
DKLDQPNFKPTIPVDNTGTVGEVIINNKLVVSKTIYDNLIKQVNSADKFTDVTEISLIDL
CCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEHHHHHHHHHHHCCCCCCCCCEEEEEEEC
PIAELFVDADNKNEIIPEVKISTVNGSDVTAEFNITKTATELTISAKNITTVRDTYIVTL
CHHHEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEEEEEEECCEEEEEEEEEEEE
SSTDIAVNDKNMGVVSTTFKIKVDLENSAPTLNLQVKNTLQEWLGSLELQQNVAVFDEKM
ECCEEEECCCCCEEEEEEEEEEEEECCCCCEEEEEEHHHHHHHHCCHHHHCCHHHHHHHH
RISDLFEDEDKLTYSVYSSVAGLEFALAPFNDGGTELEILGKPNHAYPAGETITISATDG
HHHHHCCCCCCEEHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCC
INTVYEEFTLAAIAEAGITINEIKYVALQEKITDITLKKGTPIIEAQLNITELFNTESVN
CHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHEEEEECCCEEEEEEEEHHHHCCCCCCC
GLGAIEYYAGLEDKAPGPNGENLHEGFTTVDGVNVNVDTNGTLTIYGEPNEIIKGGYFYL
CCEEEHEECCCCCCCCCCCCCCHHCCCCEECCEEEEECCCCEEEEEECCHHHHCCCEEEE
MAGVNGDTSDEISSKMVKITLSDVQPADGGEIIPPETSLNLQDKYLYKIESGNFNGVSGL
EECCCCCCHHHHCCEEEEEEEECCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCEE
FCDIRYYDSSNKKFYMNIRTEINKELCTVVNTTLSPSNQPELFEEVAEYTLQNGIFTFSY
EEEEEEEECCCCEEEEEEHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEE
NDGSEQFTTTHSPLQFDIGYDSQVSPFSHYVVRANEVGIDNDGEYESAELYSLYLGAEAV
CCCCCCEEECCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECHHHH
EEVIAVKTTHQSGNDHTTEPSNFRNQMIHYTDNNEVSEFKVEAQMRSLDFCDGTLEGSMC
HHHHEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEHHHCCCCCCCCCCCHHH
EQGLADADLIIKDMSCSEFQKAYNTPYVNGEYFINEGYIENGINKCGIDFYSESAITSGF
HCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCCCEECCCCCCCCE
YTFRASPKNENTHEEINFSFKKD
EEEEECCCCCCCCHHEEEEEECC
>Mature Secondary Structure
MKKVSLLAASVALALVGCGGSDGGSDTNTGTPSAGGIVITGFDGYFKNAVVFDDMPVATR
CCCHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHCCEEEECCCCCCCC
TSTVGKLDSNDTIFGLTDGNGKITLPKNTEIKGTLSLQTITPNGDVQKMLIARDPSKFAG
CCCCCCCCCCCEEEEEECCCCEEECCCCCCEEEEEEEEEECCCCCCEEEEEECCCCHHEE
IYTIDMDHPTQAMAHEVSFRTLSGEKIISPLTDLVAAKAGTNPTPAQIKQAKKEVNTALG
EEEEECCCCHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
LDEENTDVFSDVIAAGDHALHKTAQILTESKVEAGNNYTPTAAIAIAEKATEIVKDPENA
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHCCCCCC
DKLDQPNFKPTIPVDNTGTVGEVIINNKLVVSKTIYDNLIKQVNSADKFTDVTEISLIDL
CCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEHHHHHHHHHHHCCCCCCCCCEEEEEEEC
PIAELFVDADNKNEIIPEVKISTVNGSDVTAEFNITKTATELTISAKNITTVRDTYIVTL
CHHHEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEEEEEEECCEEEEEEEEEEEE
SSTDIAVNDKNMGVVSTTFKIKVDLENSAPTLNLQVKNTLQEWLGSLELQQNVAVFDEKM
ECCEEEECCCCCEEEEEEEEEEEEECCCCCEEEEEEHHHHHHHHCCHHHHCCHHHHHHHH
RISDLFEDEDKLTYSVYSSVAGLEFALAPFNDGGTELEILGKPNHAYPAGETITISATDG
HHHHHCCCCCCEEHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCC
INTVYEEFTLAAIAEAGITINEIKYVALQEKITDITLKKGTPIIEAQLNITELFNTESVN
CHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHEEEEECCCEEEEEEEEHHHHCCCCCCC
GLGAIEYYAGLEDKAPGPNGENLHEGFTTVDGVNVNVDTNGTLTIYGEPNEIIKGGYFYL
CCEEEHEECCCCCCCCCCCCCCHHCCCCEECCEEEEECCCCEEEEEECCHHHHCCCEEEE
MAGVNGDTSDEISSKMVKITLSDVQPADGGEIIPPETSLNLQDKYLYKIESGNFNGVSGL
EECCCCCCHHHHCCEEEEEEEECCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCEE
FCDIRYYDSSNKKFYMNIRTEINKELCTVVNTTLSPSNQPELFEEVAEYTLQNGIFTFSY
EEEEEEEECCCCEEEEEEHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEE
NDGSEQFTTTHSPLQFDIGYDSQVSPFSHYVVRANEVGIDNDGEYESAELYSLYLGAEAV
CCCCCCEEECCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECHHHH
EEVIAVKTTHQSGNDHTTEPSNFRNQMIHYTDNNEVSEFKVEAQMRSLDFCDGTLEGSMC
HHHHEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEHHHCCCCCCCCCCCHHH
EQGLADADLIIKDMSCSEFQKAYNTPYVNGEYFINEGYIENGINKCGIDFYSESAITSGF
HCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCCCEECCCCCCCCE
YTFRASPKNENTHEEINFSFKKD
EEEEECCCCCCCCHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA