| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is csgE [C]
Identifier: 59713014
GI number: 59713014
Start: 2692806
End: 2693258
Strand: Reverse
Name: csgE [C]
Synonym: VF_2407
Alternate gene names: 59713014
Gene position: 2693258-2692806 (Counterclockwise)
Preceding gene: 59713015
Following gene: 59713013
Centisome position: 92.95
GC content: 32.23
Gene sequence:
>453_bases ATGAATATTAAATATATTAGTATCGTTTTTTTTACATCTTTTATTTCTTTTGCTTCAGATAATAAAGCTTCGTTAGAGTC TAAAGCTCCTTTGGAAAACAACAGCGTAAATGAGGTAGATGATTTAATTGAACTTGATGGGTTGATTATTGATCGTACAT TGACTCGTTTGGGACGAGATTTTTATTTTTCTTTTTCTATGAAAATGAACGCTAGATATGAAGATATAGATGTAAACCTA ACAATAAAAGAAAGACCGACGGCATTATCTGGAAGCATTATAGGGGTTTATCATTTTGATAAGGTTATTTATAGAAGTGC TCTTTCCCCAGGTCAACGACAGGCTGATGAGAAAGCAGAACAGGCTCTAGAAGCCGTAAATAAATACATAGTTAAATGGC AAACAGAAAAGTTATTTAAAGATACATTTGATCTCGATTACCCTGAGATCTAA
Upstream 100 bases:
>100_bases TTAAAACGCATTTATATAATGTCTTTAAAAAATTAAATGTAAAAAATAGATTACAAGCAATGATGTGGGCTAAAGGGTAT GACTTTGAAGGAAATAATCG
Downstream 100 bases:
>100_bases GGACTAATTATGGCAATAAGGAATGTATTGCTAATGCTATCTATCTGTATACCTGTTTTTGTTCATGCGAGTGAATTGGT ATACACACCAGTGAATCCTA
Product: curli production assembly/transport component CsgE
Products: NA
Alternate protein names: Curli Assembly Protein CsgE; Assembly/Transport Component In Curli Production CsgE
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MNIKYISIVFFTSFISFASDNKASLESKAPLENNSVNEVDDLIELDGLIIDRTLTRLGRDFYFSFSMKMNARYEDIDVNL TIKERPTALSGSIIGVYHFDKVIYRSALSPGQRQADEKAEQALEAVNKYIVKWQTEKLFKDTFDLDYPEI
Sequences:
>Translated_150_residues MNIKYISIVFFTSFISFASDNKASLESKAPLENNSVNEVDDLIELDGLIIDRTLTRLGRDFYFSFSMKMNARYEDIDVNL TIKERPTALSGSIIGVYHFDKVIYRSALSPGQRQADEKAEQALEAVNKYIVKWQTEKLFKDTFDLDYPEI >Mature_150_residues MNIKYISIVFFTSFISFASDNKASLESKAPLENNSVNEVDDLIELDGLIIDRTLTRLGRDFYFSFSMKMNARYEDIDVNL TIKERPTALSGSIIGVYHFDKVIYRSALSPGQRQADEKAEQALEAVNKYIVKWQTEKLFKDTFDLDYPEI
Specific function: May Be Involved In The Biogenesis Of Curli Organelles. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17267; Mature: 17267
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKYISIVFFTSFISFASDNKASLESKAPLENNSVNEVDDLIELDGLIIDRTLTRLGRD CCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHH FYFSFSMKMNARYEDIDVNLTIKERPTALSGSIIGVYHFDKVIYRSALSPGQRQADEKAE EEEEEEEEECCEEEEEEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHH QALEAVNKYIVKWQTEKLFKDTFDLDYPEI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNIKYISIVFFTSFISFASDNKASLESKAPLENNSVNEVDDLIELDGLIIDRTLTRLGRD CCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHH FYFSFSMKMNARYEDIDVNLTIKERPTALSGSIIGVYHFDKVIYRSALSPGQRQADEKAE EEEEEEEEECCEEEEEEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHH QALEAVNKYIVKWQTEKLFKDTFDLDYPEI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA