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The map label for this gene is csgF [H]

Identifier: 59713013

GI number: 59713013

Start: 2692395

End: 2692796

Strand: Reverse

Name: csgF [H]

Synonym: VF_2406

Alternate gene names: 59713013

Gene position: 2692796-2692395 (Counterclockwise)

Preceding gene: 59713014

Following gene: 59713012

Centisome position: 92.93

GC content: 36.32

Gene sequence:

>402_bases
ATGGCAATAAGGAATGTATTGCTAATGCTATCTATCTGTATACCTGTTTTTGTTCATGCGAGTGAATTGGTATACACACC
AGTGAATCCTAATTTCGGAGGAAACCCTTTAAATACATCACACCTGTTTGGTGGTGCAAATGCAATTAATGATTATAAAG
GACCTCAAGAAGATTCATTATTTGAACAAGAGTCAGCGCTAGATCGTTTAACATCTAGTTTGCAATCTCGCTTGATCAGT
CAATTACTTGCTGATGTAGGTAATGGTAATACTGGGCAATTAATTACAGATGATTTCATACTTAATATTGTTGATGACTC
AGGGGCTTTATTGATTCAAATTGTTGATAAAGCAACAGGGGAAACATCAGAGATTCAGGTGAGTGGCTTAACTCCAGATT
GA

Upstream 100 bases:

>100_bases
GGCTCTAGAAGCCGTAAATAAATACATAGTTAAATGGCAAACAGAAAAGTTATTTAAAGATACATTTGATCTCGATTACC
CTGAGATCTAAGGACTAATT

Downstream 100 bases:

>100_bases
TCTAACGCTAAGGACTGAGCAATGAAATATTCAATTTATTATTTATTCATACTACTGTTAGCGGGTTGTTCAAATTCAAT
CGATATTCCTGAAACTTCTG

Product: curli production assembly/transport component CsgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MAIRNVLLMLSICIPVFVHASELVYTPVNPNFGGNPLNTSHLFGGANAINDYKGPQEDSLFEQESALDRLTSSLQSRLIS
QLLADVGNGNTGQLITDDFILNIVDDSGALLIQIVDKATGETSEIQVSGLTPD

Sequences:

>Translated_133_residues
MAIRNVLLMLSICIPVFVHASELVYTPVNPNFGGNPLNTSHLFGGANAINDYKGPQEDSLFEQESALDRLTSSLQSRLIS
QLLADVGNGNTGQLITDDFILNIVDDSGALLIQIVDKATGETSEIQVSGLTPD
>Mature_132_residues
AIRNVLLMLSICIPVFVHASELVYTPVNPNFGGNPLNTSHLFGGANAINDYKGPQEDSLFEQESALDRLTSSLQSRLISQ
LLADVGNGNTGQLITDDFILNIVDDSGALLIQIVDKATGETSEIQVSGLTPD

Specific function: May be involved in the biogenesis of curli organelles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787275, Length=93, Percent_Identity=39.7849462365591, Blast_Score=73, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018893 [H]

Pfam domain/function: PF10614 Tafi-CsgF [H]

EC number: NA

Molecular weight: Translated: 14215; Mature: 14084

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRNVLLMLSICIPVFVHASELVYTPVNPNFGGNPLNTSHLFGGANAINDYKGPQEDSL
CHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
FEQESALDRLTSSLQSRLISQLLADVGNGNTGQLITDDFILNIVDDSGALLIQIVDKATG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEECCCCEEEEEEECCCCC
ETSEIQVSGLTPD
CCCEEEEECCCCC
>Mature Secondary Structure 
AIRNVLLMLSICIPVFVHASELVYTPVNPNFGGNPLNTSHLFGGANAINDYKGPQEDSL
HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
FEQESALDRLTSSLQSRLISQLLADVGNGNTGQLITDDFILNIVDDSGALLIQIVDKATG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEECCCCEEEEEEECCCCC
ETSEIQVSGLTPD
CCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]