| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is argB
Identifier: 59712912
GI number: 59712912
Start: 2590094
End: 2590876
Strand: Reverse
Name: argB
Synonym: VF_2305
Alternate gene names: 59712912
Gene position: 2590876-2590094 (Counterclockwise)
Preceding gene: 59712913
Following gene: 59712911
Centisome position: 89.42
GC content: 41.38
Gene sequence:
>783_bases ATGAATCAACGTCCATTGGTTATAAAGCTTGGTGGAGCAGTATTGTCTTCAATCGATACGCTCACGCTGTTATTTAAAAC AATTTCAAATTATCAACAGCAAGCCAAGCGTTCTCTTATTATTGTTCATGGTGGTGGCTATCTTGTTGATGAGCTTATGG CAAAGCTTCAATTAGAAACAATAAAAAAAGAGGGGTTACGAGTTACTCCAAAAGATCAGATTGGCTATATCACAGGTGCG TTGGCTGGAACGGCAAATAAAATGCTACAGGGCCAAGCCATGAAAAATAACGTTAAGGCAATTGGCTTAAGTTTGGCTGA TGGTGGTTTGTGTCAGATCACTCAATTAAACCCTGAATTAGGTAATGTCGGCTTAGCAACGGCTGGTGATGCAAAAGTAT TAGAGGCGATTTTAGCAACTCAAGTAACGCCCATTATTAGCTCTATCGGTATTACGAATGATGGTGAATTAATGAATGTA AATGCTGATCAAGCTGCGGTTGCAGTAGCGACAGCATTGGATGCTGATTTGGTTCTATTGTCAGACGTTCCCGGAGTGCT AGATGCCGAAAAACAGCTGATTAAGAGTTTGGACTCAGCGCAAGCTGAAATGTTAATTCACCAAGCTGTTATTACCGATG GCATGATAGTTAAAGTCCGTGCAGCATTGGATGCAGCTCAAGAATTAGGGCGAGCAATAGAAGTGGCTTCATGGCGCTCA CCAGAAAAATTAGCTGAGTTGTTTATTGGAAACAGCATTGGCACACAATTTCAGCCTCAATAG
Upstream 100 bases:
>100_bases TAACTTGTTGAAAGGTGCATCAAGTCAAGCAATGCAATGCATTAATATTCGTTTTGGTTTTCCGGTATTAACCGCATTGA TTTAAGGAAGAATAATAAAT
Downstream 100 bases:
>100_bases GCAATGTAATTTTAAGAATATAGTCGCCGCGAGTTGTGCGGTTCAAGGAGAATAGAATGAGTAAGAAAGTAGAAGTAAAC AAGGTTGTTGTCGCATACTC
Product: acetylglutamate kinase
Products: NA
Alternate protein names: N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; AGK
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MNQRPLVIKLGGAVLSSIDTLTLLFKTISNYQQQAKRSLIIVHGGGYLVDELMAKLQLETIKKEGLRVTPKDQIGYITGA LAGTANKMLQGQAMKNNVKAIGLSLADGGLCQITQLNPELGNVGLATAGDAKVLEAILATQVTPIISSIGITNDGELMNV NADQAAVAVATALDADLVLLSDVPGVLDAEKQLIKSLDSAQAEMLIHQAVITDGMIVKVRAALDAAQELGRAIEVASWRS PEKLAELFIGNSIGTQFQPQ
Sequences:
>Translated_260_residues MNQRPLVIKLGGAVLSSIDTLTLLFKTISNYQQQAKRSLIIVHGGGYLVDELMAKLQLETIKKEGLRVTPKDQIGYITGA LAGTANKMLQGQAMKNNVKAIGLSLADGGLCQITQLNPELGNVGLATAGDAKVLEAILATQVTPIISSIGITNDGELMNV NADQAAVAVATALDADLVLLSDVPGVLDAEKQLIKSLDSAQAEMLIHQAVITDGMIVKVRAALDAAQELGRAIEVASWRS PEKLAELFIGNSIGTQFQPQ >Mature_260_residues MNQRPLVIKLGGAVLSSIDTLTLLFKTISNYQQQAKRSLIIVHGGGYLVDELMAKLQLETIKKEGLRVTPKDQIGYITGA LAGTANKMLQGQAMKNNVKAIGLSLADGGLCQITQLNPELGNVGLATAGDAKVLEAILATQVTPIISSIGITNDGELMNV NADQAAVAVATALDADLVLLSDVPGVLDAEKQLIKSLDSAQAEMLIHQAVITDGMIVKVRAALDAAQELGRAIEVASWRS PEKLAELFIGNSIGTQFQPQ
Specific function: Arginine biosynthesis; second step. [C]
COG id: COG0548
COG function: function code E; Acetylglutamate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetylglutamate kinase family
Homologues:
Organism=Escherichia coli, GI145693208, Length=253, Percent_Identity=55.7312252964427, Blast_Score=263, Evalue=7e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGB_VIBF1 (Q5E2E6)
Other databases:
- EMBL: CP000020 - RefSeq: YP_205688.1 - HSSP: P0A6C8 - ProteinModelPortal: Q5E2E6 - SMR: Q5E2E6 - STRING: Q5E2E6 - GeneID: 3279433 - GenomeReviews: CP000020_GR - KEGG: vfi:VF_2305 - NMPDR: fig|312309.3.peg.2305 - eggNOG: COG0548 - HOGENOM: HBG497643 - OMA: MVLCGST - PhylomeDB: Q5E2E6 - ProtClustDB: PRK00942 - BioCyc: VFIS312309:VF2305-MONOMER - GO: GO:0005737 - HAMAP: MF_00082_B - InterPro: IPR004662 - InterPro: IPR001048 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000728 - TIGRFAMs: TIGR00761
Pfam domain/function: PF00696 AA_kinase; SSF53633 Aa_kinase
EC number: =2.7.2.8
Molecular weight: Translated: 27390; Mature: 27390
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: BINDING 67-67 BINDING 159-159
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRPLVIKLGGAVLSSIDTLTLLFKTISNYQQQAKRSLIIVHGGGYLVDELMAKLQLET CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHH IKKEGLRVTPKDQIGYITGALAGTANKMLQGQAMKNNVKAIGLSLADGGLCQITQLNPEL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEECCCCEEEEEECCCCC GNVGLATAGDAKVLEAILATQVTPIISSIGITNDGELMNVNADQAAVAVATALDADLVLL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCEEEE SDVPGVLDAEKQLIKSLDSAQAEMLIHQAVITDGMIVKVRAALDAAQELGRAIEVASWRS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCC PEKLAELFIGNSIGTQFQPQ HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNQRPLVIKLGGAVLSSIDTLTLLFKTISNYQQQAKRSLIIVHGGGYLVDELMAKLQLET CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHH IKKEGLRVTPKDQIGYITGALAGTANKMLQGQAMKNNVKAIGLSLADGGLCQITQLNPEL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEECCCCEEEEEECCCCC GNVGLATAGDAKVLEAILATQVTPIISSIGITNDGELMNVNADQAAVAVATALDADLVLL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCEEEE SDVPGVLDAEKQLIKSLDSAQAEMLIHQAVITDGMIVKVRAALDAAQELGRAIEVASWRS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCC PEKLAELFIGNSIGTQFQPQ HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA