| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is malM [C]
Identifier: 59712878
GI number: 59712878
Start: 2552607
End: 2553434
Strand: Direct
Name: malM [C]
Synonym: VF_2271
Alternate gene names: 59712878
Gene position: 2552607-2553434 (Clockwise)
Preceding gene: 59712877
Following gene: 59712881
Centisome position: 88.1
GC content: 37.2
Gene sequence:
>828_bases ATGAACACGAAAAAATTGTTACTTAGCTTATTTATCGGTCTCTCTTTGACTGCGTGTTCTTCAACCGAAGCCATACAACA ACAGCCGATAAAACCACTCGCAAACTCTCAAGTATGCTGTAGTGACTTTTCTCAATATCCTTGGATACAGCTAGCAACAA CAGAAGATATCAATTTCCAATTAGATAAAGATTCACCTATTGGTCACTTTTCTGATGGAAACAGCTATTTTAATGCCTTC AAATTCGCTGAACGTTCAGGAAAAGTACAACTTCGCCTCTCTAGTTTAATGATTAATGACTCAGTCGCAGCACCAAAACT CATTGCTCTCGATCATGAGTTTAATGTGGTAAGTACAACAAGTTTAGACCAATTTGATGTCAAGCCATCCGATGCATTTA CTCGTACTCAGTTTCAATTAAATTTCCAACTTAATGCAGCTAAAACCCCTTATTTTATTATCTATTCTTCTAATGAGTAT TTAGGTCAATCTATTAAGGTGAAGCACCCAGCAAGGATCAGAGCGGAAGAATTAGGTGAACCGATGCCAATGGTAACGGA TCCAACTTATGCTTATGAGCGTTTTGGTAAACTAAAGCTATCGATAAAAACGCTTTCATTACAAGCGGATAAACAAGCAG ATCAACAACCTAAAGTAGCAATAAAATCAGCACAACCAGAAACCCACACTTTCTATAAAGAGGCTATTGTTGAGGCAGTA AAAACAAACGACATACCTAAAGCATTAGCGCTGCTAGAGGAAGCAAAATCGCTAGGAATTCAAGATGCTCAAGATACATT TGTTCAAGCTTTAGAAAGTCAAAAATAA
Upstream 100 bases:
>100_bases GGTGTACACACTGAAATCTGGTTCTAACTGAGTTAAAGTGAAAGGCGGCCAAATGGCTGCCTTTTTGCGTTTATTATCAC CTTAATAATGGAGTATCGTG
Downstream 100 bases:
>100_bases TTTCTTTCCTAAATAAAAAAAAGCTTCTAACTTAATTAATTAGTTAGAAGCCTTTTCTACATAAAAGATAAAGCGAATTA CGCTTCCATGTATCCTTTAG
Product: maltose operon periplasmic protein precursor
Products: NA
Alternate protein names: Maltose Operon Periplasmic
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MNTKKLLLSLFIGLSLTACSSTEAIQQQPIKPLANSQVCCSDFSQYPWIQLATTEDINFQLDKDSPIGHFSDGNSYFNAF KFAERSGKVQLRLSSLMINDSVAAPKLIALDHEFNVVSTTSLDQFDVKPSDAFTRTQFQLNFQLNAAKTPYFIIYSSNEY LGQSIKVKHPARIRAEELGEPMPMVTDPTYAYERFGKLKLSIKTLSLQADKQADQQPKVAIKSAQPETHTFYKEAIVEAV KTNDIPKALALLEEAKSLGIQDAQDTFVQALESQK
Sequences:
>Translated_275_residues MNTKKLLLSLFIGLSLTACSSTEAIQQQPIKPLANSQVCCSDFSQYPWIQLATTEDINFQLDKDSPIGHFSDGNSYFNAF KFAERSGKVQLRLSSLMINDSVAAPKLIALDHEFNVVSTTSLDQFDVKPSDAFTRTQFQLNFQLNAAKTPYFIIYSSNEY LGQSIKVKHPARIRAEELGEPMPMVTDPTYAYERFGKLKLSIKTLSLQADKQADQQPKVAIKSAQPETHTFYKEAIVEAV KTNDIPKALALLEEAKSLGIQDAQDTFVQALESQK >Mature_275_residues MNTKKLLLSLFIGLSLTACSSTEAIQQQPIKPLANSQVCCSDFSQYPWIQLATTEDINFQLDKDSPIGHFSDGNSYFNAF KFAERSGKVQLRLSSLMINDSVAAPKLIALDHEFNVVSTTSLDQFDVKPSDAFTRTQFQLNFQLNAAKTPYFIIYSSNEY LGQSIKVKHPARIRAEELGEPMPMVTDPTYAYERFGKLKLSIKTLSLQADKQADQQPKVAIKSAQPETHTFYKEAIVEAV KTNDIPKALALLEEAKSLGIQDAQDTFVQALESQK
Specific function: Not Yet Known. Might Function In The Uptake Of A Still Unidentified Substrate. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30698; Mature: 30698
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKKLLLSLFIGLSLTACSSTEAIQQQPIKPLANSQVCCSDFSQYPWIQLATTEDINFQ CCHHHHHHHHHHHCEEEECCCHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEECCCEEE LDKDSPIGHFSDGNSYFNAFKFAERSGKVQLRLSSLMINDSVAAPKLIALDHEFNVVSTT ECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEECCCCCEEEEC SLDQFDVKPSDAFTRTQFQLNFQLNAAKTPYFIIYSSNEYLGQSIKVKHPARIRAEELGE CCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEECCCHHCCCEEEECCCCCCCHHHCCC PMPMVTDPTYAYERFGKLKLSIKTLSLQADKQADQQPKVAIKSAQPETHTFYKEAIVEAV CCCCCCCCHHHHHHHCEEEEEEEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH KTNDIPKALALLEEAKSLGIQDAQDTFVQALESQK HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNTKKLLLSLFIGLSLTACSSTEAIQQQPIKPLANSQVCCSDFSQYPWIQLATTEDINFQ CCHHHHHHHHHHHCEEEECCCHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEECCCEEE LDKDSPIGHFSDGNSYFNAFKFAERSGKVQLRLSSLMINDSVAAPKLIALDHEFNVVSTT ECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEECCCCCEEEEC SLDQFDVKPSDAFTRTQFQLNFQLNAAKTPYFIIYSSNEYLGQSIKVKHPARIRAEELGE CCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEECCCHHCCCEEEECCCCCCCHHHCCC PMPMVTDPTYAYERFGKLKLSIKTLSLQADKQADQQPKVAIKSAQPETHTFYKEAIVEAV CCCCCCCCHHHHHHHCEEEEEEEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH KTNDIPKALALLEEAKSLGIQDAQDTFVQALESQK HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA