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The map label for this gene is lamB [H]

Identifier: 59712877

GI number: 59712877

Start: 2551193

End: 2552533

Strand: Direct

Name: lamB [H]

Synonym: VF_2270

Alternate gene names: 59712877

Gene position: 2551193-2552533 (Clockwise)

Preceding gene: 59712876

Following gene: 59712878

Centisome position: 88.05

GC content: 41.91

Gene sequence:

>1341_bases
ATGAAAATGAATAAATACACATTGCTTGCCGCTGCTGTTTCTACAGCACTATTTTCTGGCGCTACACTTGCTGAAACTGA
TGTTGCACTGGATGTCATCACAGGTGACGAAGCAGCACCAAAAGTTGAAAAAGTAAATGGAACTGATGTTATTTCAGATG
GTTGGGAAGTTCACGGTTACGCGTCAATGAACTTCCGCATGGTAGATGGTGAAACGGTTGATACTGAGTTTGGTAAACCA
GACTATAAAACAGCAGGTACTCACGGAAAAAGTACTAACCAAGTTGAATTTGTAATCAAAAAACATACTGAACACGCAAA
TGGCGTTTGGTCTGACTTTGTCGTTCGATCTGAATACGGTAATGGTAACTCTTACGCTTACTCATCTCCTGGTAGCCAAA
AAGCCAACACAACGGCACAATTTGAAATCAAAGAAACTTATGTTGAAATTGGTGGCTTGTCTTACCTAGGTGAAGATACA
TCTATCTGGGGTGGTCAACGTTACCTAAACCGTTCTGCAAGTGTACTATCGGGTGAATTCTGGAAACAATCATCAGGCGT
TGGTGCAGGTATTCAAACTAAACTTGGTGGCAACACAGCAGGTTTTGCAATTGTTGCCGCAGATACTGATAGTGATATCA
ATAGCGGAGCCAGTGACAGACAAACATTAACCTCACACGATTTATACTACTACGGTGTTGATGTTGGCTTTGGTAGCTTA
GATTTTGATTTCAAATACATCACTCAAGCTAATGTTCAAGATGATGACGGTTTCGGCGCATCTATCACATTAAACTCTAG
TTACTATGGCCTAGATGGTTGGTCACAAACAGCGATTGCTTACGGTAAAGGCGCAGCGCAAAACCGTGGTGTGAACTTTG
GTAGCTGGTCAGGTGGCGATGACAATGCTGAATCTATCTTCTTCACTTCAGGCGGTGTGGTAAACATTTCTGAAAACTGG
CAAATGGGTTCTGAGGTAACATACTTTGCTGGGTTGGATGAATTGTTTAGTGCCAAAGATCTAAAACGCTACATCGTTGC
AGCGCGTCCATCATACAAAGTAAATGATAACCTTCGTCTTGAAGCGACAGGTTCTTACGCTCATGAAGAAGTTGAAGTTG
GCGGAGTATGGGGTAAAAGTGCAGATGCCGCAGAAAGCGATATTGTTAACTTAGAGTTAGCAGCCGCATTTACGGTAAAC
GCGGACTACTTTGGTCGTCCACAAATCAAACCATACGTAAGTTATATCCTAGCTGATGATGAAGCAAGTGCTAAAGATAT
TGGCATTAAAGATGGTAAGTCAGAAACAATTATCGGTGTACACACTGAAATCTGGTTCTAA

Upstream 100 bases:

>100_bases
TCGATAACGACAGATGTTTACTTCACTTCCCTACACTGCCATGAGTTAAGTAAACGTTTTCAAATCAAAATATCCTGAAA
AAAGGAAATAGGATTTTAAG

Downstream 100 bases:

>100_bases
CTGAGTTAAAGTGAAAGGCGGCCAAATGGCTGCCTTTTTGCGTTTATTATCACCTTAATAATGGAGTATCGTGATGAACA
CGAAAAAATTGTTACTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Maltose-inducible porin [H]

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKMNKYTLLAAAVSTALFSGATLAETDVALDVITGDEAAPKVEKVNGTDVISDGWEVHGYASMNFRMVDGETVDTEFGKP
DYKTAGTHGKSTNQVEFVIKKHTEHANGVWSDFVVRSEYGNGNSYAYSSPGSQKANTTAQFEIKETYVEIGGLSYLGEDT
SIWGGQRYLNRSASVLSGEFWKQSSGVGAGIQTKLGGNTAGFAIVAADTDSDINSGASDRQTLTSHDLYYYGVDVGFGSL
DFDFKYITQANVQDDDGFGASITLNSSYYGLDGWSQTAIAYGKGAAQNRGVNFGSWSGGDDNAESIFFTSGGVVNISENW
QMGSEVTYFAGLDELFSAKDLKRYIVAARPSYKVNDNLRLEATGSYAHEEVEVGGVWGKSADAAESDIVNLELAAAFTVN
ADYFGRPQIKPYVSYILADDEASAKDIGIKDGKSETIIGVHTEIWF

Sequences:

>Translated_446_residues
MKMNKYTLLAAAVSTALFSGATLAETDVALDVITGDEAAPKVEKVNGTDVISDGWEVHGYASMNFRMVDGETVDTEFGKP
DYKTAGTHGKSTNQVEFVIKKHTEHANGVWSDFVVRSEYGNGNSYAYSSPGSQKANTTAQFEIKETYVEIGGLSYLGEDT
SIWGGQRYLNRSASVLSGEFWKQSSGVGAGIQTKLGGNTAGFAIVAADTDSDINSGASDRQTLTSHDLYYYGVDVGFGSL
DFDFKYITQANVQDDDGFGASITLNSSYYGLDGWSQTAIAYGKGAAQNRGVNFGSWSGGDDNAESIFFTSGGVVNISENW
QMGSEVTYFAGLDELFSAKDLKRYIVAARPSYKVNDNLRLEATGSYAHEEVEVGGVWGKSADAAESDIVNLELAAAFTVN
ADYFGRPQIKPYVSYILADDEASAKDIGIKDGKSETIIGVHTEIWF
>Mature_446_residues
MKMNKYTLLAAAVSTALFSGATLAETDVALDVITGDEAAPKVEKVNGTDVISDGWEVHGYASMNFRMVDGETVDTEFGKP
DYKTAGTHGKSTNQVEFVIKKHTEHANGVWSDFVVRSEYGNGNSYAYSSPGSQKANTTAQFEIKETYVEIGGLSYLGEDT
SIWGGQRYLNRSASVLSGEFWKQSSGVGAGIQTKLGGNTAGFAIVAADTDSDINSGASDRQTLTSHDLYYYGVDVGFGSL
DFDFKYITQANVQDDDGFGASITLNSSYYGLDGWSQTAIAYGKGAAQNRGVNFGSWSGGDDNAESIFFTSGGVVNISENW
QMGSEVTYFAGLDELFSAKDLKRYIVAARPSYKVNDNLRLEATGSYAHEEVEVGGVWGKSADAAESDIVNLELAAAFTVN
ADYFGRPQIKPYVSYILADDEASAKDIGIKDGKSETIIGVHTEIWF

Specific function: Involved in the transport of maltose and maltodextrins [H]

COG id: COG4580

COG function: function code G; Maltoporin (phage lambda and maltose receptor)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the porin LamB (TC 1.B.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003192
- ProDom:   PD008788 [H]

Pfam domain/function: PF02264 LamB [H]

EC number: NA

Molecular weight: Translated: 47962; Mature: 47962

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMNKYTLLAAAVSTALFSGATLAETDVALDVITGDEAAPKVEKVNGTDVISDGWEVHGY
CCCCCEEHHHHHHHHHHHCCCEEEECCEEEEEEECCCCCCCEEECCCCEEECCCEEEEEE
ASMNFRMVDGETVDTEFGKPDYKTAGTHGKSTNQVEFVIKKHTEHANGVWSDFVVRSEYG
EEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCC
NGNSYAYSSPGSQKANTTAQFEIKETYVEIGGLSYLGEDTSIWGGQRYLNRSASVLSGEF
CCCCEEECCCCCCCCCCEEEEEEEEEEEEECCEEEECCCCCCCCCHHHHCCCHHHHCCHH
WKQSSGVGAGIQTKLGGNTAGFAIVAADTDSDINSGASDRQTLTSHDLYYYGVDVGFGSL
HHCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
DFDFKYITQANVQDDDGFGASITLNSSYYGLDGWSQTAIAYGKGAAQNRGVNFGSWSGGD
CCCEEEEEECCCCCCCCCCEEEEECCCEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
DNAESIFFTSGGVVNISENWQMGSEVTYFAGLDELFSAKDLKRYIVAARPSYKVNDNLRL
CCCCEEEEECCCEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHEEECCCCEEECCCEEE
EATGSYAHEEVEVGGVWGKSADAAESDIVNLELAAAFTVNADYFGRPQIKPYVSYILADD
EECCCCCCCEEEECCEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECC
EASAKDIGIKDGKSETIIGVHTEIWF
CCCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKMNKYTLLAAAVSTALFSGATLAETDVALDVITGDEAAPKVEKVNGTDVISDGWEVHGY
CCCCCEEHHHHHHHHHHHCCCEEEECCEEEEEEECCCCCCCEEECCCCEEECCCEEEEEE
ASMNFRMVDGETVDTEFGKPDYKTAGTHGKSTNQVEFVIKKHTEHANGVWSDFVVRSEYG
EEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCC
NGNSYAYSSPGSQKANTTAQFEIKETYVEIGGLSYLGEDTSIWGGQRYLNRSASVLSGEF
CCCCEEECCCCCCCCCCEEEEEEEEEEEEECCEEEECCCCCCCCCHHHHCCCHHHHCCHH
WKQSSGVGAGIQTKLGGNTAGFAIVAADTDSDINSGASDRQTLTSHDLYYYGVDVGFGSL
HHCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
DFDFKYITQANVQDDDGFGASITLNSSYYGLDGWSQTAIAYGKGAAQNRGVNFGSWSGGD
CCCEEEEEECCCCCCCCCCEEEEECCCEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
DNAESIFFTSGGVVNISENWQMGSEVTYFAGLDELFSAKDLKRYIVAARPSYKVNDNLRL
CCCCEEEEECCCEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHEEECCCCEEECCCEEE
EATGSYAHEEVEVGGVWGKSADAAESDIVNLELAAAFTVNADYFGRPQIKPYVSYILADD
EECCCCCCCEEEECCEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECC
EASAKDIGIKDGKSETIIGVHTEIWF
CCCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA