| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712864
Identifier: 59712864
GI number: 59712864
Start: 2533185
End: 2533586
Strand: Direct
Name: 59712864
Synonym: VF_2257
Alternate gene names: NA
Gene position: 2533185-2533586 (Clockwise)
Preceding gene: 59712863
Following gene: 59712865
Centisome position: 87.43
GC content: 36.32
Gene sequence:
>402_bases ATGTCAAAGAAAACAGATAATGGTATTTGGTTTGCTTATATTGCAAGCCTACTAACTCCAATCACTCTTATGGTTTCAGG AATTATTGCAATCATTTATGCGGGCTACCAAATGAATAAAGGCACTAATGATGAAGTCATCGATAGTCACTACTACGCGA TCATTAAAAGCTTTTTCCTTTTTCTTACATTTTTCGTTGTTTTAGCAGTAACGGCTGCAACAATGAGTGGTATGGCTGCG GGTCTCGATTACTGGGTAGATAGCTCTATCCTTGATAAAGTTTATGCTGCTATTCCAGTTGTTGGTGCAGTAATCTCAGT TCTTGCTATTGGTACTTGGTTCGTTAAATTAGCGAAAGGTATGCAAAAACTTAAAGCATATCAACCAATTGAAAATCAAT AA
Upstream 100 bases:
>100_bases AAAAGAATGCTGAAATAACCGCTACTACTTAGCAAGTATATTCCCATAATAAAAATAAGGTATATACTTGCTACATTCAT TTCATTACTGGACAAATATT
Downstream 100 bases:
>100_bases TATAAAGGCACTCAATGTGCCTTTTTTATTTCGAGTTATAAAATAAATATTTGACGAAGATCATACTAACTAGAAAGTGA TCTTCACGGATTTTACTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSKKTDNGIWFAYIASLLTPITLMVSGIIAIIYAGYQMNKGTNDEVIDSHYYAIIKSFFLFLTFFVVLAVTAATMSGMAA GLDYWVDSSILDKVYAAIPVVGAVISVLAIGTWFVKLAKGMQKLKAYQPIENQ
Sequences:
>Translated_133_residues MSKKTDNGIWFAYIASLLTPITLMVSGIIAIIYAGYQMNKGTNDEVIDSHYYAIIKSFFLFLTFFVVLAVTAATMSGMAA GLDYWVDSSILDKVYAAIPVVGAVISVLAIGTWFVKLAKGMQKLKAYQPIENQ >Mature_132_residues SKKTDNGIWFAYIASLLTPITLMVSGIIAIIYAGYQMNKGTNDEVIDSHYYAIIKSFFLFLTFFVVLAVTAATMSGMAAG LDYWVDSSILDKVYAAIPVVGAVISVLAIGTWFVKLAKGMQKLKAYQPIENQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14574; Mature: 14443
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKTDNGIWFAYIASLLTPITLMVSGIIAIIYAGYQMNKGTNDEVIDSHYYAIIKSFFL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHH FLTFFVVLAVTAATMSGMAAGLDYWVDSSILDKVYAAIPVVGAVISVLAIGTWFVKLAKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQKLKAYQPIENQ HHHHHHCCCCCCC >Mature Secondary Structure SKKTDNGIWFAYIASLLTPITLMVSGIIAIIYAGYQMNKGTNDEVIDSHYYAIIKSFFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHH FLTFFVVLAVTAATMSGMAAGLDYWVDSSILDKVYAAIPVVGAVISVLAIGTWFVKLAKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQKLKAYQPIENQ HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA