| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is secA [H]
Identifier: 59712800
GI number: 59712800
Start: 2463016
End: 2465739
Strand: Reverse
Name: secA [H]
Synonym: VF_2193
Alternate gene names: 59712800
Gene position: 2465739-2463016 (Counterclockwise)
Preceding gene: 59712802
Following gene: 59712799
Centisome position: 85.1
GC content: 40.12
Gene sequence:
>2724_bases ATGTTTTCTAAAATTCTAACTAAAGTTATTGGTAGCCGTAATGATCGTACATTACGTAAGCTACGTAAAATCGTAGACCA AATTAATAAACTTGAACCACAATTCGAATCACTACAAGATGAAGAATTAAAAGCGAAAACAATCGAGTTCCGTGCACGTT TAGAGCAAGGTGAAGATTTAGACAGTTTACTTCCAGAAGCATTTGCTACAGTACGTGAAGCATCTAAGCGTTTATATGGT ATGCGTCACTTTGATGTTCAAATGATTGGCGGTATGGTACTAAACGATAGCCAAATCGCAGAGATGCGTACAGGTGAAGG TAAAACACTAACAGCAACATTGCCATGTTATTTGAATGCATTAACTGGTAAAGGTGTTCACGTTGTTACCGTGAATGACT ACTTAGCTAAGCGTGATGCTGAAACAAACCGTGAGTTATTTGAATTCTTAGGCATGACTGTTGGTGTAAACGTTCCAAAC ATGCCACCTCAAGAGAAAAAACAAGCTTACTTATGTGACATTCTATACGGCACAAACAACGAATTTGGTTTTGATTACCT ACGTGACAATATGGCTTTCCGTGCGGAAGATCGTGTTCAACGTGAGCGTTATTTTGCGGTAGTCGATGAAGTGGATTCAA TCTTAATCGATGAAGCTCGTACTCCTCTAATTATTTCTGGCCCTGCTGAAGATAGTTCTGAACTGTATATCCGTATCAAC ACTCTTATCCCTCAACTTGTTAAGCAAGACGAAGAAGACAGTGAAGAATACCGTGGTGAAGGTCACTACACACTAGATGA AAAAGGCAAACAAACGCACTTAACCGAAAACGGTCAAGAGTTTGTTGAGCAACTGCTTAAAGATGCTGGCTTAATGGAAG AAGATGATACGTTGTATTCTCCTGCAAATATTAGCCTGCTTCATCATATTAATGCTGCTTTACGTGCGCATGTGTTATTT GAAAAAGATGTCGATTACATTGTAAAAGATGATGAAGTAATCATTGTTGATGAGCATACAGGTCGTACAATGCCTGGTCG TCGTTGGTCTGAAGGTTTACACCAAGCTGTTGAGGCAAAAGAAGGTGTTAAGATTCAGAACGAAAACCAAACATTGGCTT CTATTACATTCCAAAACTTCTTCCGTTTATATGACAAACTGTCAGGTATGACAGGTACTGCGGACACAGAAGCATTTGAA TTCCAATCAATCTATGGTTTAGATACGGTTGTTATTCCAACTAACCGCCCAATGGCTCGTAATGACATGGGTGATTTAGT TTATATGACAGAAGCAGAAAAATTTGCGGCTATCATTGAAGACATTAAGGGCTGTTCTGAGCGTGGCCAACCGGTTCTTG TTGGTACGGTTTCGATTGAAAAATCAGAATTGCTTTCAAATGCACTGAAAAAAGCAAAAATTAAACATAACGTACTTAAT GCGAAATTCCACGAACAAGAAGCCGATATCGTTGCTAATGCAGGTACTGCAAGCGCTGTAACTATCGCAACTAACATGGC TGGTCGTGGTACAGATATCGTGTTAGGCGGTAGTTGGCAGGCAGATGTTGCTAAACTATCAGATCCAACAGAAGAGCAAA TCCAAGCAGTAAAAGCGAAATGGAAAGAAGCACATGATGCTGTTCTTGCTTCTGGTGGTTTACATATTATCGGTACTGAG CGCCATGAATCTCGCCGTATTGATAACCAATTACGTGGTCGTGCTGGTCGTCAAGGTGATGCTGGTTCTTCTCGTTTCTA CCTATCAATGGAAGATGCACTAATGCGTATCTTTGCTTCGGATCGTGTATCAGGCATGATGAAGAAGTTAGGTATGGAAG AAGGTGAAGCAATCGAACACCCATGGGTAACTAAAGCGATTGAAAATGCACAACGTAAAGTTGAAGGTCGTAACTTTGAT ATTCGTAAGCAATTGCTTGAATACGATGATGTAGCAAATGATCAGCGTAAAGTTGTTTATGAACTGCGTGACGAGTTAAT GAATGTTGATGATATCAGCGAAATGATTGGTTACAACCGTCAAGAAGTTCTTGAAGGTCTATTTGGTCAATACATTCCAC CTCAATCTTTAGAAGAAATGTGGGATGTTGAAGGACTAACGATTCGTCTACGTGCTGATTTTGATTTGGATCTTCCACTT CAAGAGTGGCTAGATAACGATGATAAACTTCATGAAGATAACCTACGTGAAAAAATCATCGAAGCTGCTGTACAAGTTTA CAAAGAGAAAGAAGAGTCTGTTGGCGAATCAGTTCTACGTAACTTTGAAAAAGCGGTTATGCTACAAACACTTGATGGCC TATGGAAAGAGCACTTAGCTGCAATGGATCACTTACGTCAAGGTATTCACTTGCGTGGTTATGCTCAGAAAAACCCGAAA CAAGAGTACAAGCGTGAGTCGTTTGAGTTGTTTGAAGGTTTACTTGATACGTTAAAATTTGATGTTGTTTCGATCTTAAG TAAAGTTCGAGTTCAACAGCAAGAAGATGTAGAGCGTATGGAAGAGCAACGTCGTTTACAAGCTGAAGAAGCCGCTCGAC GTCAACAGCTACAACATCAAAATGCTGAAAATCAGCTAGATGATGGCGAAGGTGCAGAAGAAGCTCATTCTCCAATGGTT CGTGAAGAACGTAAAGTGGGTCGTAATGAACCTTGCCCATGTGGTTCAGGTAAGAAATACAAACAATGTCACGGTAAGAT CTAG
Upstream 100 bases:
>100_bases AAAGAAGTATTTTTCTTAGAGTAAACTCTAGGCGATTGATTCACATTTCAGATTAAACCAGATCATTAATGATCAAGAGA TAAAGAGAAGCAACGGAATC
Downstream 100 bases:
>100_bases TTGATACTTATTGTTCTTAATTGAAAAATAAAAGCCGCTATCATTTAGCGGCTTTTTTATAAGCGTGATATGGATATAGA AAAGGTTATACATGAAACGA
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 907; Mature: 907
Protein sequence:
>907_residues MFSKILTKVIGSRNDRTLRKLRKIVDQINKLEPQFESLQDEELKAKTIEFRARLEQGEDLDSLLPEAFATVREASKRLYG MRHFDVQMIGGMVLNDSQIAEMRTGEGKTLTATLPCYLNALTGKGVHVVTVNDYLAKRDAETNRELFEFLGMTVGVNVPN MPPQEKKQAYLCDILYGTNNEFGFDYLRDNMAFRAEDRVQRERYFAVVDEVDSILIDEARTPLIISGPAEDSSELYIRIN TLIPQLVKQDEEDSEEYRGEGHYTLDEKGKQTHLTENGQEFVEQLLKDAGLMEEDDTLYSPANISLLHHINAALRAHVLF EKDVDYIVKDDEVIIVDEHTGRTMPGRRWSEGLHQAVEAKEGVKIQNENQTLASITFQNFFRLYDKLSGMTGTADTEAFE FQSIYGLDTVVIPTNRPMARNDMGDLVYMTEAEKFAAIIEDIKGCSERGQPVLVGTVSIEKSELLSNALKKAKIKHNVLN AKFHEQEADIVANAGTASAVTIATNMAGRGTDIVLGGSWQADVAKLSDPTEEQIQAVKAKWKEAHDAVLASGGLHIIGTE RHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMKKLGMEEGEAIEHPWVTKAIENAQRKVEGRNFD IRKQLLEYDDVANDQRKVVYELRDELMNVDDISEMIGYNRQEVLEGLFGQYIPPQSLEEMWDVEGLTIRLRADFDLDLPL QEWLDNDDKLHEDNLREKIIEAAVQVYKEKEESVGESVLRNFEKAVMLQTLDGLWKEHLAAMDHLRQGIHLRGYAQKNPK QEYKRESFELFEGLLDTLKFDVVSILSKVRVQQQEDVERMEEQRRLQAEEAARRQQLQHQNAENQLDDGEGAEEAHSPMV REERKVGRNEPCPCGSGKKYKQCHGKI
Sequences:
>Translated_907_residues MFSKILTKVIGSRNDRTLRKLRKIVDQINKLEPQFESLQDEELKAKTIEFRARLEQGEDLDSLLPEAFATVREASKRLYG MRHFDVQMIGGMVLNDSQIAEMRTGEGKTLTATLPCYLNALTGKGVHVVTVNDYLAKRDAETNRELFEFLGMTVGVNVPN MPPQEKKQAYLCDILYGTNNEFGFDYLRDNMAFRAEDRVQRERYFAVVDEVDSILIDEARTPLIISGPAEDSSELYIRIN TLIPQLVKQDEEDSEEYRGEGHYTLDEKGKQTHLTENGQEFVEQLLKDAGLMEEDDTLYSPANISLLHHINAALRAHVLF EKDVDYIVKDDEVIIVDEHTGRTMPGRRWSEGLHQAVEAKEGVKIQNENQTLASITFQNFFRLYDKLSGMTGTADTEAFE FQSIYGLDTVVIPTNRPMARNDMGDLVYMTEAEKFAAIIEDIKGCSERGQPVLVGTVSIEKSELLSNALKKAKIKHNVLN AKFHEQEADIVANAGTASAVTIATNMAGRGTDIVLGGSWQADVAKLSDPTEEQIQAVKAKWKEAHDAVLASGGLHIIGTE RHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMKKLGMEEGEAIEHPWVTKAIENAQRKVEGRNFD IRKQLLEYDDVANDQRKVVYELRDELMNVDDISEMIGYNRQEVLEGLFGQYIPPQSLEEMWDVEGLTIRLRADFDLDLPL QEWLDNDDKLHEDNLREKIIEAAVQVYKEKEESVGESVLRNFEKAVMLQTLDGLWKEHLAAMDHLRQGIHLRGYAQKNPK QEYKRESFELFEGLLDTLKFDVVSILSKVRVQQQEDVERMEEQRRLQAEEAARRQQLQHQNAENQLDDGEGAEEAHSPMV REERKVGRNEPCPCGSGKKYKQCHGKI >Mature_907_residues MFSKILTKVIGSRNDRTLRKLRKIVDQINKLEPQFESLQDEELKAKTIEFRARLEQGEDLDSLLPEAFATVREASKRLYG MRHFDVQMIGGMVLNDSQIAEMRTGEGKTLTATLPCYLNALTGKGVHVVTVNDYLAKRDAETNRELFEFLGMTVGVNVPN MPPQEKKQAYLCDILYGTNNEFGFDYLRDNMAFRAEDRVQRERYFAVVDEVDSILIDEARTPLIISGPAEDSSELYIRIN TLIPQLVKQDEEDSEEYRGEGHYTLDEKGKQTHLTENGQEFVEQLLKDAGLMEEDDTLYSPANISLLHHINAALRAHVLF EKDVDYIVKDDEVIIVDEHTGRTMPGRRWSEGLHQAVEAKEGVKIQNENQTLASITFQNFFRLYDKLSGMTGTADTEAFE FQSIYGLDTVVIPTNRPMARNDMGDLVYMTEAEKFAAIIEDIKGCSERGQPVLVGTVSIEKSELLSNALKKAKIKHNVLN AKFHEQEADIVANAGTASAVTIATNMAGRGTDIVLGGSWQADVAKLSDPTEEQIQAVKAKWKEAHDAVLASGGLHIIGTE RHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMKKLGMEEGEAIEHPWVTKAIENAQRKVEGRNFD IRKQLLEYDDVANDQRKVVYELRDELMNVDDISEMIGYNRQEVLEGLFGQYIPPQSLEEMWDVEGLTIRLRADFDLDLPL QEWLDNDDKLHEDNLREKIIEAAVQVYKEKEESVGESVLRNFEKAVMLQTLDGLWKEHLAAMDHLRQGIHLRGYAQKNPK QEYKRESFELFEGLLDTLKFDVVSILSKVRVQQQEDVERMEEQRRLQAEEAARRQQLQHQNAENQLDDGEGAEEAHSPMV REERKVGRNEPCPCGSGKKYKQCHGKI
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=907, Percent_Identity=71.8853362734289, Blast_Score=1383, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 103183; Mature: 103183
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKILTKVIGSRNDRTLRKLRKIVDQINKLEPQFESLQDEELKAKTIEFRARLEQGEDL CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCCH DSLLPEAFATVREASKRLYGMRHFDVQMIGGMVLNDSQIAEMRTGEGKTLTATLPCYLNA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCHHHHHHHCCCCCEEEEEHHHHHHH LTGKGVHVVTVNDYLAKRDAETNRELFEFLGMTVGVNVPNMPPQEKKQAYLCDILYGTNN HCCCCEEEEEECHHHHHCCCCCHHHHHHHHCCCEECCCCCCCCHHHHHEEEEEEEECCCC EFGFDYLRDNMAFRAEDRVQRERYFAVVDEVDSILIDEARTPLIISGPAEDSSELYIRIN CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEH TLIPQLVKQDEEDSEEYRGEGHYTLDEKGKQTHLTENGQEFVEQLLKDAGLMEEDDTLYS HHHHHHHHCCCCHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEC PANISLLHHINAALRAHVLFEKDVDYIVKDDEVIIVDEHTGRTMPGRRWSEGLHQAVEAK CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHH EGVKIQNENQTLASITFQNFFRLYDKLSGMTGTADTEAFEFQSIYGLDTVVIPTNRPMAR CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCC NDMGDLVYMTEAEKFAAIIEDIKGCSERGQPVLVGTVSIEKSELLSNALKKAKIKHNVLN CCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHC AKFHEQEADIVANAGTASAVTIATNMAGRGTDIVLGGSWQADVAKLSDPTEEQIQAVKAK CHHHHCCHHHEECCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHCCCCCHHHHHHHHHH WKEAHDAVLASGGLHIIGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFAS HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHH DRVSGMMKKLGMEEGEAIEHPWVTKAIENAQRKVEGRNFDIRKQLLEYDDVANDQRKVVY HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH ELRDELMNVDDISEMIGYNRQEVLEGLFGQYIPPQSLEEMWDVEGLTIRLRADFDLDLPL HHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCH QEWLDNDDKLHEDNLREKIIEAAVQVYKEKEESVGESVLRNFEKAVMLQTLDGLWKEHLA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMDHLRQGIHLRGYAQKNPKQEYKRESFELFEGLLDTLKFDVVSILSKVRVQQQEDVERM HHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEQRRLQAEEAARRQQLQHQNAENQLDDGEGAEEAHSPMVREERKVGRNEPCPCGSGKKY HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCHH KQCHGKI HHHCCCC >Mature Secondary Structure MFSKILTKVIGSRNDRTLRKLRKIVDQINKLEPQFESLQDEELKAKTIEFRARLEQGEDL CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCCH DSLLPEAFATVREASKRLYGMRHFDVQMIGGMVLNDSQIAEMRTGEGKTLTATLPCYLNA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCHHHHHHHCCCCCEEEEEHHHHHHH LTGKGVHVVTVNDYLAKRDAETNRELFEFLGMTVGVNVPNMPPQEKKQAYLCDILYGTNN HCCCCEEEEEECHHHHHCCCCCHHHHHHHHCCCEECCCCCCCCHHHHHEEEEEEEECCCC EFGFDYLRDNMAFRAEDRVQRERYFAVVDEVDSILIDEARTPLIISGPAEDSSELYIRIN CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEH TLIPQLVKQDEEDSEEYRGEGHYTLDEKGKQTHLTENGQEFVEQLLKDAGLMEEDDTLYS HHHHHHHHCCCCHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEC PANISLLHHINAALRAHVLFEKDVDYIVKDDEVIIVDEHTGRTMPGRRWSEGLHQAVEAK CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHH EGVKIQNENQTLASITFQNFFRLYDKLSGMTGTADTEAFEFQSIYGLDTVVIPTNRPMAR CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCC NDMGDLVYMTEAEKFAAIIEDIKGCSERGQPVLVGTVSIEKSELLSNALKKAKIKHNVLN CCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHC AKFHEQEADIVANAGTASAVTIATNMAGRGTDIVLGGSWQADVAKLSDPTEEQIQAVKAK CHHHHCCHHHEECCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHCCCCCHHHHHHHHHH WKEAHDAVLASGGLHIIGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFAS HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHH DRVSGMMKKLGMEEGEAIEHPWVTKAIENAQRKVEGRNFDIRKQLLEYDDVANDQRKVVY HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH ELRDELMNVDDISEMIGYNRQEVLEGLFGQYIPPQSLEEMWDVEGLTIRLRADFDLDLPL HHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCH QEWLDNDDKLHEDNLREKIIEAAVQVYKEKEESVGESVLRNFEKAVMLQTLDGLWKEHLA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMDHLRQGIHLRGYAQKNPKQEYKRESFELFEGLLDTLKFDVVSILSKVRVQQQEDVERM HHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEQRRLQAEEAARRQQLQHQNAENQLDDGEGAEEAHSPMVREERKVGRNEPCPCGSGKKY HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCHH KQCHGKI HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA