| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is coaE
Identifier: 59712796
GI number: 59712796
Start: 2460862
End: 2461410
Strand: Direct
Name: coaE
Synonym: VF_2189
Alternate gene names: 59712796
Gene position: 2460862-2461410 (Clockwise)
Preceding gene: 59712795
Following gene: 59712797
Centisome position: 84.93
GC content: 36.43
Gene sequence:
>549_bases ATGAGTTATGTCGTAGCAATTACTGGTGGTATTGGTAGTGGAAAAACTACCGTTGCCGATCGCTTTCAAGCACTCTATAA CATCAATATTGTTGATGCTGATATTATTGCTCGTGAAGTTGTTAATCCAGGAACCGAAGGATTAATCCAAATAGAGCAAC ATTTTGGACCACAAATCTTACTGGACGATGGCCATTTAAATAGAGCGAAGTTGCGTGAGTGTATTTTTTCTGAACCTAGT GAAAAACAGTGGCTCAATGATTTATTACATCCATTGATCCGTTCAGAGATGCAACGTCAAATAGCTTTATCCACTTCAGA GTACACATTGCTTGTAGTGCCTCTTTTAGTTGAGAATAAGTTACAATATTTAGCAAATCGTGTACTTGTTGTTGATGTTT TGGAGCAAACTCAAATTAATCGCACTGTAAATCGTGATAAAGTAAATCATCAACAAGTTAAAGCAATTCTTGCTTCACAA GCATCAAGAGAAGAACGTTTAGCGGCTGCGGATGATATAATTAATAACGATCACAAAATAATGACTTAG
Upstream 100 bases:
>100_bases TTCCCTTTGGTCCTTATTTAGCTATTGCTGGCTGGGTTTGCCTATTATGGGGACAAAACATTAGCCAATGGTATTTTAAT CACATTCTAGGTTTGCCACT
Downstream 100 bases:
>100_bases ATATGAAAATATCTCTGCTACATGAGAAATATCTGCTATTGTCTCTGGCATCTATAAATAAAGAGAATGAATAACGACTA TGAATGGATTGGGTATGCAA
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSYVVAITGGIGSGKTTVADRFQALYNINIVDADIIAREVVNPGTEGLIQIEQHFGPQILLDDGHLNRAKLRECIFSEPS EKQWLNDLLHPLIRSEMQRQIALSTSEYTLLVVPLLVENKLQYLANRVLVVDVLEQTQINRTVNRDKVNHQQVKAILASQ ASREERLAAADDIINNDHKIMT
Sequences:
>Translated_182_residues MSYVVAITGGIGSGKTTVADRFQALYNINIVDADIIAREVVNPGTEGLIQIEQHFGPQILLDDGHLNRAKLRECIFSEPS EKQWLNDLLHPLIRSEMQRQIALSTSEYTLLVVPLLVENKLQYLANRVLVVDVLEQTQINRTVNRDKVNHQQVKAILASQ ASREERLAAADDIINNDHKIMT >Mature_181_residues SYVVAITGGIGSGKTTVADRFQALYNINIVDADIIAREVVNPGTEGLIQIEQHFGPQILLDDGHLNRAKLRECIFSEPSE KQWLNDLLHPLIRSEMQRQIALSTSEYTLLVVPLLVENKLQYLANRVLVVDVLEQTQINRTVNRDKVNHQQVKAILASQA SREERLAAADDIINNDHKIMT
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain
Homologues:
Organism=Homo sapiens, GI191252797, Length=179, Percent_Identity=35.195530726257, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI191252795, Length=179, Percent_Identity=35.195530726257, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI110227607, Length=167, Percent_Identity=28.7425149700599, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI110227605, Length=167, Percent_Identity=28.7425149700599, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI110227603, Length=167, Percent_Identity=28.7425149700599, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI110227601, Length=167, Percent_Identity=28.7425149700599, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI205277394, Length=167, Percent_Identity=28.7425149700599, Blast_Score=71, Evalue=4e-13, Organism=Escherichia coli, GI1786292, Length=177, Percent_Identity=59.3220338983051, Blast_Score=196, Evalue=7e-52, Organism=Caenorhabditis elegans, GI17554944, Length=182, Percent_Identity=32.967032967033, Blast_Score=103, Evalue=4e-23, Organism=Caenorhabditis elegans, GI25143409, Length=165, Percent_Identity=26.0606060606061, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6320402, Length=185, Percent_Identity=38.9189189189189, Blast_Score=119, Evalue=2e-28, Organism=Drosophila melanogaster, GI24644728, Length=182, Percent_Identity=29.1208791208791, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24658602, Length=185, Percent_Identity=28.6486486486486, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAE_VIBF1 (Q5E2R2)
Other databases:
- EMBL: CP000020 - RefSeq: YP_205572.1 - ProteinModelPortal: Q5E2R2 - SMR: Q5E2R2 - STRING: Q5E2R2 - GeneID: 3279516 - GenomeReviews: CP000020_GR - KEGG: vfi:VF_2189 - NMPDR: fig|312309.3.peg.2189 - eggNOG: COG0237 - HOGENOM: HBG650290 - OMA: IIAREVV - PhylomeDB: Q5E2R2 - ProtClustDB: PRK00081 - BioCyc: VFIS312309:VF2189-MONOMER - GO: GO:0005737 - HAMAP: MF_00376 - InterPro: IPR001977 - TIGRFAMs: TIGR00152
Pfam domain/function: PF01121 CoaE
EC number: =2.7.1.24
Molecular weight: Translated: 20464; Mature: 20333
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS51219 DPCK; PS01294 COAE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVVAITGGIGSGKTTVADRFQALYNINIVDADIIAREVVNPGTEGLIQIEQHFGPQIL CCEEEEEECCCCCCCHHHHHHHHHHHCCCEECHHHHHHHHCCCCCCCEEEEHHCCCCEEE LDDGHLNRAKLRECIFSEPSEKQWLNDLLHPLIRSEMQRQIALSTSEYTLLVVPLLVENK EECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH LQYLANRVLVVDVLEQTQINRTVNRDKVNHQQVKAILASQASREERLAAADDIINNDHKI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE MT CC >Mature Secondary Structure SYVVAITGGIGSGKTTVADRFQALYNINIVDADIIAREVVNPGTEGLIQIEQHFGPQIL CEEEEEECCCCCCCHHHHHHHHHHHCCCEECHHHHHHHHCCCCCCCEEEEHHCCCCEEE LDDGHLNRAKLRECIFSEPSEKQWLNDLLHPLIRSEMQRQIALSTSEYTLLVVPLLVENK EECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH LQYLANRVLVVDVLEQTQINRTVNRDKVNHQQVKAILASQASREERLAAADDIINNDHKI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE MT CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA