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The map label for this gene is yacL [C]

Identifier: 59712761

GI number: 59712761

Start: 2411283

End: 2411651

Strand: Reverse

Name: yacL [C]

Synonym: VF_2154

Alternate gene names: 59712761

Gene position: 2411651-2411283 (Counterclockwise)

Preceding gene: 172087756

Following gene: 59712760

Centisome position: 83.23

GC content: 35.77

Gene sequence:

>369_bases
ATGGATTACGAATTTAAGAAAAATACCCTTGAGGGTACATACCATGCGAATTTTTCCATGGGGCATGAAGCCATGGGACG
TTGGTTAGTTGAAGATGTAGCGAAAAATACGGATTTACTCGCAGAAATATATAAGCACATCGCTTTAATTAAAAATACAC
AGGATGAGTGGACGTTATCAGGCAAGGTGATGACATTAGTATTGAGCGATCAAGAAGTCATTGTTCAGGAGAACGCATTG
TTTGAACAATCTGATGAAGAGTTCGAAGAAGATATTCATATGTATGATGATGAATGTATATCTGTATGTGGATTAGAAGA
CTTTGAAACTATGCTTCAAAGTTGGGAAGCATTTATAAATCGTTTTTAA

Upstream 100 bases:

>100_bases
AAAAAAAATAGGGATAAGATTATACTGGAGTAAAAGAGCTCGGCATTGTCTTTGATCCAAAACGTGTGAGTTAACGCCGA
TATAATTGTTAGGATATCCG

Downstream 100 bases:

>100_bases
TCTAATGCTCATTGATAGGGAAAGGCTGCACTATATTAGTGCGGCCTTTTTTGTTTTGTTACTCTGCATTTTTCTATCTT
ATTGAATAATAATTATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MDYEFKKNTLEGTYHANFSMGHEAMGRWLVEDVAKNTDLLAEIYKHIALIKNTQDEWTLSGKVMTLVLSDQEVIVQENAL
FEQSDEEFEEDIHMYDDECISVCGLEDFETMLQSWEAFINRF

Sequences:

>Translated_122_residues
MDYEFKKNTLEGTYHANFSMGHEAMGRWLVEDVAKNTDLLAEIYKHIALIKNTQDEWTLSGKVMTLVLSDQEVIVQENAL
FEQSDEEFEEDIHMYDDECISVCGLEDFETMLQSWEAFINRF
>Mature_122_residues
MDYEFKKNTLEGTYHANFSMGHEAMGRWLVEDVAKNTDLLAEIYKHIALIKNTQDEWTLSGKVMTLVLSDQEVIVQENAL
FEQSDEEFEEDIHMYDDECISVCGLEDFETMLQSWEAFINRF

Specific function: Unknown

COG id: COG3112

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0231 family

Homologues:

Organism=Escherichia coli, GI87081687, Length=121, Percent_Identity=35.5371900826446, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2154_VIBF1 (Q5E2U7)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_205537.1
- STRING:   Q5E2U7
- GeneID:   3277721
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_2154
- NMPDR:   fig|312309.3.peg.2154
- eggNOG:   COG3112
- HOGENOM:   HBG679736
- OMA:   KGSERQW
- PhylomeDB:   Q5E2U7
- ProtClustDB:   PRK05248
- BioCyc:   VFIS312309:VF2154-MONOMER
- HAMAP:   MF_01053
- InterPro:   IPR008249
- PIRSF:   PIRSF006287
- ProDom:   PD020773

Pfam domain/function: PF06062 UPF0231

EC number: NA

Molecular weight: Translated: 14298; Mature: 14298

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYEFKKNTLEGTYHANFSMGHEAMGRWLVEDVAKNTDLLAEIYKHIALIKNTQDEWTLS
CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEC
GKVMTLVLSDQEVIVQENALFEQSDEEFEEDIHMYDDECISVCGLEDFETMLQSWEAFIN
CEEEEEEECCCHHHHHHCHHHCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHH
RF
CC
>Mature Secondary Structure
MDYEFKKNTLEGTYHANFSMGHEAMGRWLVEDVAKNTDLLAEIYKHIALIKNTQDEWTLS
CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEC
GKVMTLVLSDQEVIVQENALFEQSDEEFEEDIHMYDDECISVCGLEDFETMLQSWEAFIN
CEEEEEEECCCHHHHHHCHHHCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHH
RF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA