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The map label for this gene is flaF [H]

Identifier: 59712686

GI number: 59712686

Start: 2313486

End: 2314619

Strand: Reverse

Name: flaF [H]

Synonym: VF_2079

Alternate gene names: 59712686

Gene position: 2314619-2313486 (Counterclockwise)

Preceding gene: 59712687

Following gene: 172087751

Centisome position: 79.88

GC content: 39.59

Gene sequence:

>1134_bases
ATGGCAATTTCAGTAAATACAAATATCTCGGCAATGACAGCACAACGTTACATGAACAATGCAACTGCTGCCCAAACTGA
TTCAATGGAAAAATTGTCTTCAGGTTCGAAAATTAACAGTGCTGCTGATGATGCTTCTGGTCTACAAATTTCAAACCGTA
TGACTGCGCAAAGTCGTGGTCTAAACGTGGCAGTACGAAATGCACATGAAGGTATGTCTATTACGCAAACTGCTGAAGGT
GCAATGAAGGAAACAACTAACGTTCTTCAACGCCTACGTGACTTATCTCTTCAATCTGCGAACGGTTCAAACACTGATGC
TGATCGTGCTGCAATGCAAGAAGAAGCAAGTTCATTAACTGATGAATTAAACCGTATTGCTGAAACAACATCTTTTGCGG
GTACACGCTTAATTAACGGCGAATTTGGTACTAAATCATTCCAAATTGGTGCAGATTCAGGTGAAGCAGTTGCTGTAACA
CTTAATAGCATGCGTGCTGATGAAGCAACAATGGGCGGTAAATCTTACTTTGCTGAAGAAGGTCGTGACATTAACTGGAA
AGTAGGTGCAGAGAATACGCAATTCAATGTGTCTTACAATGATAAGAATGGTAACGCTCAAGAAATCAATATCACAGCAA
AAACAGGTGATGATATTGAAGAGTTAGCGACTTACATTAACGGTCAAACAAATGAGTTAAGCGCATCTGTTACTGAAGAT
GGTGTACTTCAAGTATTCATGTCAGGTGAGACGATCTCTTCTCCATTAGAATTTAGCGGTTCATTAGCTAATGAACTAAA
AATGGGTGGCGAATCTGATGATACAGTAGCATCAATGGATTTAACTACCGTTGGCGGTGCACAGCGTTCAATTGACGTTA
TCGATGCAGCTCTAGAATACGTAGATAGCAACCGTGCTTCATTAGGTGCAATCCAAAACCGTTTTGATAGTGCGATTAAA
AACTTAACGAACATCAACGAAAATATCTCTGACTCTAATAGTCAGATTAAAGATACTGATTTCGCTAAAGAAACAACAAA
TTTAACTAAGAGCCAGATCTTAAGCCAATCAAGCTCATCTATTTTGGCACAAGCTAAACAAGCGCCAAATGCGGCAGTAA
GTCTATTAGGCTAA

Upstream 100 bases:

>100_bases
TCTCAAGTTCTGAAATTGTAGGCCGTAAATATGTGTATCAACGATGAATTATAGGCTTCAACCCTATAACAATAAATGAA
GCCTGACCGGAGCAAATACA

Downstream 100 bases:

>100_bases
TTTGCCAAAAAATTAAAATTCATCGAGATTAAGAAAGCTGTGACTATAATGGTCACAGCTTTTTTTGTTTTTATACCAAT
CACAGGGAATAAATATGACT

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MAISVNTNISAMTAQRYMNNATAAQTDSMEKLSSGSKINSAADDASGLQISNRMTAQSRGLNVAVRNAHEGMSITQTAEG
AMKETTNVLQRLRDLSLQSANGSNTDADRAAMQEEASSLTDELNRIAETTSFAGTRLINGEFGTKSFQIGADSGEAVAVT
LNSMRADEATMGGKSYFAEEGRDINWKVGAENTQFNVSYNDKNGNAQEINITAKTGDDIEELATYINGQTNELSASVTED
GVLQVFMSGETISSPLEFSGSLANELKMGGESDDTVASMDLTTVGGAQRSIDVIDAALEYVDSNRASLGAIQNRFDSAIK
NLTNINENISDSNSQIKDTDFAKETTNLTKSQILSQSSSSILAQAKQAPNAAVSLLG

Sequences:

>Translated_377_residues
MAISVNTNISAMTAQRYMNNATAAQTDSMEKLSSGSKINSAADDASGLQISNRMTAQSRGLNVAVRNAHEGMSITQTAEG
AMKETTNVLQRLRDLSLQSANGSNTDADRAAMQEEASSLTDELNRIAETTSFAGTRLINGEFGTKSFQIGADSGEAVAVT
LNSMRADEATMGGKSYFAEEGRDINWKVGAENTQFNVSYNDKNGNAQEINITAKTGDDIEELATYINGQTNELSASVTED
GVLQVFMSGETISSPLEFSGSLANELKMGGESDDTVASMDLTTVGGAQRSIDVIDAALEYVDSNRASLGAIQNRFDSAIK
NLTNINENISDSNSQIKDTDFAKETTNLTKSQILSQSSSSILAQAKQAPNAAVSLLG
>Mature_376_residues
AISVNTNISAMTAQRYMNNATAAQTDSMEKLSSGSKINSAADDASGLQISNRMTAQSRGLNVAVRNAHEGMSITQTAEGA
MKETTNVLQRLRDLSLQSANGSNTDADRAAMQEEASSLTDELNRIAETTSFAGTRLINGEFGTKSFQIGADSGEAVAVTL
NSMRADEATMGGKSYFAEEGRDINWKVGAENTQFNVSYNDKNGNAQEINITAKTGDDIEELATYINGQTNELSASVTEDG
VLQVFMSGETISSPLEFSGSLANELKMGGESDDTVASMDLTTVGGAQRSIDVIDAALEYVDSNRASLGAIQNRFDSAIKN
LTNINENISDSNSQIKDTDFAKETTNLTKSQILSQSSSSILAQAKQAPNAAVSLLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaA is not essential for polar flagellar synthesis and swimming motility. Homopolymer of flaA is able to form a functional filament [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=172, Percent_Identity=38.953488372093, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 39905; Mature: 39774

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISVNTNISAMTAQRYMNNATAAQTDSMEKLSSGSKINSAADDASGLQISNRMTAQSRG
CEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHCC
LNVAVRNAHEGMSITQTAEGAMKETTNVLQRLRDLSLQSANGSNTDADRAAMQEEASSLT
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
DELNRIAETTSFAGTRLINGEFGTKSFQIGADSGEAVAVTLNSMRADEATMGGKSYFAEE
HHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCEEEEEECCCCCCHHHCCCHHHHHHC
GRDINWKVGAENTQFNVSYNDKNGNAQEINITAKTGDDIEELATYINGQTNELSASVTED
CCCEEEEECCCCEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCC
GVLQVFMSGETISSPLEFSGSLANELKMGGESDDTVASMDLTTVGGAQRSIDVIDAALEY
CEEEEEECCCCCCCCHHHCCHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH
VDSNRASLGAIQNRFDSAIKNLTNINENISDSNSQIKDTDFAKETTNLTKSQILSQSSSS
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
ILAQAKQAPNAAVSLLG
HHHHHHHCCCCHHEECC
>Mature Secondary Structure 
AISVNTNISAMTAQRYMNNATAAQTDSMEKLSSGSKINSAADDASGLQISNRMTAQSRG
EEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHCC
LNVAVRNAHEGMSITQTAEGAMKETTNVLQRLRDLSLQSANGSNTDADRAAMQEEASSLT
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
DELNRIAETTSFAGTRLINGEFGTKSFQIGADSGEAVAVTLNSMRADEATMGGKSYFAEE
HHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCEEEEEECCCCCCHHHCCCHHHHHHC
GRDINWKVGAENTQFNVSYNDKNGNAQEINITAKTGDDIEELATYINGQTNELSASVTED
CCCEEEEECCCCEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCC
GVLQVFMSGETISSPLEFSGSLANELKMGGESDDTVASMDLTTVGGAQRSIDVIDAALEY
CEEEEEECCCCCCCCHHHCCHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH
VDSNRASLGAIQNRFDSAIKNLTNINENISDSNSQIKDTDFAKETTNLTKSQILSQSSSS
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
ILAQAKQAPNAAVSLLG
HHHHHHHCCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7883718; 12620739 [H]