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The map label for this gene is 59712620

Identifier: 59712620

GI number: 59712620

Start: 2246477

End: 2247289

Strand: Reverse

Name: 59712620

Synonym: VF_2013

Alternate gene names: NA

Gene position: 2247289-2246477 (Counterclockwise)

Preceding gene: 59712623

Following gene: 59712619

Centisome position: 77.56

GC content: 41.33

Gene sequence:

>813_bases
ATGTTTGTATCAGAGCCGATTTGCATCTTAACAGCAGGGCCAACGGTAGACGGTCGTAATATTGAACAATCTGTCATTGA
TGATATTGCAGAGACGTATGACCCAAAACGCTATAACGCTCGAATCAATGAAGAACATTGGTCATGGAGTGATAAGTTTG
GTTCAGTCCTTTCAGTTGAAAAACGAGATGATCAGTTATTCGCAGTGTTAAAGCCAAATTCACTTTTGCTGAGCACAATT
GAAAAAGGGCAGTTGCTTCATACCTCATGTGAAATTCGAGCGAATTTTCAGGGGACGGGTAAAAGCTACTTGACCGGATT
GGCATTGACCGATGAGCCCGCCTCCGTCGGTACGACTGAAATGCACTTATCAGCAAAAGAAAAAAACAAAGATAAATCGT
ACTTCAGCAGTGGGGCGACCATCAGCAAAGATGATTTATCAAACAATATTGACGTAGACGTACAAGAAGACCGTAAATTC
TTGTCGAGACTTAAACAACTCCTGAGCTTAGGTGAGCCGGATAAAACTCAATCATTAGAAGAGAGTGAAGACATGAACGA
AGAATTAAAAGAATTACTGCAAGCACAAACTGCAGCGGTTACCGCATTGACAGCTCAGGTAACAAGTTTAGCAGCAACGC
TTAACAAAGAAGAAAGTGCCCCTGTTGAAGAAGAAAATAATGAAACAGAGTTGGCAGAAAAAGTGGATGCGTTATCGACT
AAGTTAGACGATGTGGTAACCAAACTAAGCAACATCACTGATGAACCAAATCGAAATCTAGCGGGTGTCGATGGCGATAC
TGAGTATTTATAA

Upstream 100 bases:

>100_bases
GTAAATCAGGATTCTATATACCGAATATAGAAACAGGATGAATATAAAAAGACGTGTATTTTCGCTAAATTAAAATCAGA
AAATTTAGGAGATAAGCAGC

Downstream 100 bases:

>100_bases
ATAGTCGTTTAGTGATCTTTCTCCTTCTCTTTTTATTCTAAAAAAATAGTGGATTTTAAATAATGCAAAAGAAAACAAAA
TTAGCAGTAGAGGGTTATAA

Product: capsid scaffolding protein

Products: NA

Alternate protein names: Capsid Scaffolding; Capsid Scaffolding Protein; Phage Capsid Scaffolding; Capsid Scaffolding Protein O; Phage Capsid Scaffolding Protein GpO; Phage-Related Capsid Scaffolding Protein; V Protein Bacteriophage; Scaffold Protein; Presumed Capsid-Scaffolding Protein; Capsid Scaffolding Protein Bacteriophage Origin; Bacteriophage Protein; Bacteriophage P2 GPO Capsid Protein; Scaffold; Capsid Protein; Presumed Capsid Scaffolding Protein; Capsid Scafolding Protein; Phage-Related Capsid Scaffold Protein; Phage-Related Capsid Scaffold Bacteriophage Protein; Phage P2 Capsid Scaffolding GpO-Like Protein; Prophage Capsid Scaffolding Protein; Flagellar Biosynthesis/Type III Secretory Pathway Protein

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MFVSEPICILTAGPTVDGRNIEQSVIDDIAETYDPKRYNARINEEHWSWSDKFGSVLSVEKRDDQLFAVLKPNSLLLSTI
EKGQLLHTSCEIRANFQGTGKSYLTGLALTDEPASVGTTEMHLSAKEKNKDKSYFSSGATISKDDLSNNIDVDVQEDRKF
LSRLKQLLSLGEPDKTQSLEESEDMNEELKELLQAQTAAVTALTAQVTSLAATLNKEESAPVEEENNETELAEKVDALST
KLDDVVTKLSNITDEPNRNLAGVDGDTEYL

Sequences:

>Translated_270_residues
MFVSEPICILTAGPTVDGRNIEQSVIDDIAETYDPKRYNARINEEHWSWSDKFGSVLSVEKRDDQLFAVLKPNSLLLSTI
EKGQLLHTSCEIRANFQGTGKSYLTGLALTDEPASVGTTEMHLSAKEKNKDKSYFSSGATISKDDLSNNIDVDVQEDRKF
LSRLKQLLSLGEPDKTQSLEESEDMNEELKELLQAQTAAVTALTAQVTSLAATLNKEESAPVEEENNETELAEKVDALST
KLDDVVTKLSNITDEPNRNLAGVDGDTEYL
>Mature_270_residues
MFVSEPICILTAGPTVDGRNIEQSVIDDIAETYDPKRYNARINEEHWSWSDKFGSVLSVEKRDDQLFAVLKPNSLLLSTI
EKGQLLHTSCEIRANFQGTGKSYLTGLALTDEPASVGTTEMHLSAKEKNKDKSYFSSGATISKDDLSNNIDVDVQEDRKF
LSRLKQLLSLGEPDKTQSLEESEDMNEELKELLQAQTAAVTALTAQVTSLAATLNKEESAPVEEENNETELAEKVDALST
KLDDVVTKLSNITDEPNRNLAGVDGDTEYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29791; Mature: 29791

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVSEPICILTAGPTVDGRNIEQSVIDDIAETYDPKRYNARINEEHWSWSDKFGSVLSVE
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHCCEEEEE
KRDDQLFAVLKPNSLLLSTIEKGQLLHTSCEIRANFQGTGKSYLTGLALTDEPASVGTTE
CCCCEEEEEECCCHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHEEEEECCCCCCCCCCC
MHLSAKEKNKDKSYFSSGATISKDDLSNNIDVDVQEDRKFLSRLKQLLSLGEPDKTQSLE
EEEEHHHCCCCHHHHHCCCEECHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH
ESEDMNEELKELLQAQTAAVTALTAQVTSLAATLNKEESAPVEEENNETELAEKVDALST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
KLDDVVTKLSNITDEPNRNLAGVDGDTEYL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFVSEPICILTAGPTVDGRNIEQSVIDDIAETYDPKRYNARINEEHWSWSDKFGSVLSVE
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHCCEEEEE
KRDDQLFAVLKPNSLLLSTIEKGQLLHTSCEIRANFQGTGKSYLTGLALTDEPASVGTTE
CCCCEEEEEECCCHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHEEEEECCCCCCCCCCC
MHLSAKEKNKDKSYFSSGATISKDDLSNNIDVDVQEDRKFLSRLKQLLSLGEPDKTQSLE
EEEEHHHCCCCHHHHHCCCEECHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH
ESEDMNEELKELLQAQTAAVTALTAQVTSLAATLNKEESAPVEEENNETELAEKVDALST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
KLDDVVTKLSNITDEPNRNLAGVDGDTEYL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA