Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

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The map label for this gene is 59712623

Identifier: 59712623

GI number: 59712623

Start: 2250317

End: 2250667

Strand: Reverse

Name: 59712623

Synonym: VF_2016

Alternate gene names: NA

Gene position: 2250667-2250317 (Counterclockwise)

Preceding gene: 172087741

Following gene: 59712620

Centisome position: 77.68

GC content: 34.19

Gene sequence:

>351_bases
ATGCAAGTTAAATTAATCACAATTGTTATCTGTATATCTTTGATTATCGCTGCAGTTTGGGGGGTATATCGACAAGGACA
TGATAACGGCTTTCAGCTTGCCATGTTCCAAATGCAATCAAGAGAAACAGAGCTAACACGCAAGATAGTTGATGAAACAA
ATAAAGACATAGCTAAAGACAAAGTAATAGTTGAGCAGTATTTAAATAAGCAATATCAATTTGATAAAGAAGTGGCGCAA
TATGATTTCACATTTACGCATCAAGAAAGCGATTCTTGTCAGTGCAATAACGTTGATGATAACGAGTTGCTCGAATTACA
GCATATCATCAACACAGCAAATAAATATTAA

Upstream 100 bases:

>100_bases
ATTGATAAGCACAGTGAATTTGCATTGGTACAATACGCAGCAATAACGGGTGTATTTGTGGGTTTCTGTAAATTTTATAT
GGACGCAGGGAAGCAATAAC

Downstream 100 bases:

>100_bases
TCGTACAATTGATAGCGCTTTAACTACACTTTGTGATCCGTTACCGTTACCAGCAACAATAGAAAAAACCGCTCATGCCA
AATGGACAAGAGCGGTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MQVKLITIVICISLIIAAVWGVYRQGHDNGFQLAMFQMQSRETELTRKIVDETNKDIAKDKVIVEQYLNKQYQFDKEVAQ
YDFTFTHQESDSCQCNNVDDNELLELQHIINTANKY

Sequences:

>Translated_116_residues
MQVKLITIVICISLIIAAVWGVYRQGHDNGFQLAMFQMQSRETELTRKIVDETNKDIAKDKVIVEQYLNKQYQFDKEVAQ
YDFTFTHQESDSCQCNNVDDNELLELQHIINTANKY
>Mature_116_residues
MQVKLITIVICISLIIAAVWGVYRQGHDNGFQLAMFQMQSRETELTRKIVDETNKDIAKDKVIVEQYLNKQYQFDKEVAQ
YDFTFTHQESDSCQCNNVDDNELLELQHIINTANKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13580; Mature: 13580

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVKLITIVICISLIIAAVWGVYRQGHDNGFQLAMFQMQSRETELTRKIVDETNKDIAKD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
KVIVEQYLNKQYQFDKEVAQYDFTFTHQESDSCQCNNVDDNELLELQHIINTANKY
HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVKLITIVICISLIIAAVWGVYRQGHDNGFQLAMFQMQSRETELTRKIVDETNKDIAKD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
KVIVEQYLNKQYQFDKEVAQYDFTFTHQESDSCQCNNVDDNELLELQHIINTANKY
HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA