| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is rhlE [H]
Identifier: 59712397
GI number: 59712397
Start: 2021369
End: 2022565
Strand: Direct
Name: rhlE [H]
Synonym: VF_1790
Alternate gene names: 59712397
Gene position: 2021369-2022565 (Clockwise)
Preceding gene: 59712396
Following gene: 59712400
Centisome position: 69.76
GC content: 37.93
Gene sequence:
>1197_bases ATGCCATTTTCTAAACTTGGGTTAAGTGACCCAATTTTAAAAGCTATCGACGAGTTGGGTTATAAAGCACCAACACCAAT CCAACAAAAAGCGATCCCTGTTGCACTTACAGGTAAAAACCTAATTGCTGCTGCGCAAACAGGTACAGGTAAAACAGCAA GTTTTGTATTACCTATCTTAGAAATTCTCAGTGAAGACCCAACAAAAGTTAGAGCAAAACGTATTCGCGCTTTGATCTTA ACGCCAACTCGTGAACTTGCGATTCAAGTTGAAGAAAATATTCAACAATACAGCAAGCATATCGATATCACTTCTCTGGC TATGTACGGTGGTGTTGACTATAAAGAGCAAAAGCAACGCTTAATTGAAGGGGTTGACGTATTAGTTGCAACGCCTGGCC GTTTGCTTGATATGTACACTCAAAGAGCGATTCACTTTGATGAATTAGATATTCTGGTTCTTGATGAAGCTGACCGTATG CTAGATATGGGCTTTATCGAAGACATTAATAAAATTATCGAACGTTTACCGTTAGATCGTCAAAACATGCTGTTTTCAGC AACGTTATCAGATCAAGTTCGTTATTTAGCAAAAACAGCCATCAATAACCCAATTGAGATTTCAATTTCTCCAAAAACAA CATCTTCACCACAAATTGATCAGTGGTTAACGACTGTTGATAAAGATAAGAAATCAGCGCTACTTAGTCATTTAATAAAA GAGAACAATTGGAATCAAGCACTGATCTTTATTGAAACAAAACACGGTGCTGCGAAACTAGTTAGTCAATTAGAAAAACG TGATATCAGAGCCGAAGCGTTCCACAGTGGCCGTAGCCAAGAAGCTCGTGCAAAAGTATTAAACGACTTTAAAGAAGGCA AACTACAATATTTGGTTGCAACAGGGATTGCAGCTCGTGGTATTGATATTGATGAATTAACACGAGTTGTTAACTATGAC TTACCTTTTCCTGCTGACGATTATGTTCACCGTATTGGTCGTACAGGTCGTGCGGGAGCAAAAGGTGAGGCGATTTCATT TGTATCTAAAGACGATTTTAAAAACTTATGTATGATTGAAAGTCGTTTAGGTCATCTCATTGTACGTAAAGAAATTGAAG GATTTGCACCACGTAAAGAAGTGCCAATTTCAATTCTAAACTACAAACCAAAAAGAAAACCGACACCGAAAAACTGA
Upstream 100 bases:
>100_bases TAAACACCAATACTAAGAAAGGTATTGGTGTTTATTCCTCTGCTGTCATTTCTTTTTTTCATGCTACAATCCTCTTCTAT TCATATATCTGAGATTTCAC
Downstream 100 bases:
>100_bases GTTATTTAATCAGTAATCATGATACATCTAATTAAAATACAAAAAGCTCATACAAATAGTATGAGCTTTTTTATTGGTTT TTATCCATTACAATAGATGC
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MPFSKLGLSDPILKAIDELGYKAPTPIQQKAIPVALTGKNLIAAAQTGTGKTASFVLPILEILSEDPTKVRAKRIRALIL TPTRELAIQVEENIQQYSKHIDITSLAMYGGVDYKEQKQRLIEGVDVLVATPGRLLDMYTQRAIHFDELDILVLDEADRM LDMGFIEDINKIIERLPLDRQNMLFSATLSDQVRYLAKTAINNPIEISISPKTTSSPQIDQWLTTVDKDKKSALLSHLIK ENNWNQALIFIETKHGAAKLVSQLEKRDIRAEAFHSGRSQEARAKVLNDFKEGKLQYLVATGIAARGIDIDELTRVVNYD LPFPADDYVHRIGRTGRAGAKGEAISFVSKDDFKNLCMIESRLGHLIVRKEIEGFAPRKEVPISILNYKPKRKPTPKN
Sequences:
>Translated_398_residues MPFSKLGLSDPILKAIDELGYKAPTPIQQKAIPVALTGKNLIAAAQTGTGKTASFVLPILEILSEDPTKVRAKRIRALIL TPTRELAIQVEENIQQYSKHIDITSLAMYGGVDYKEQKQRLIEGVDVLVATPGRLLDMYTQRAIHFDELDILVLDEADRM LDMGFIEDINKIIERLPLDRQNMLFSATLSDQVRYLAKTAINNPIEISISPKTTSSPQIDQWLTTVDKDKKSALLSHLIK ENNWNQALIFIETKHGAAKLVSQLEKRDIRAEAFHSGRSQEARAKVLNDFKEGKLQYLVATGIAARGIDIDELTRVVNYD LPFPADDYVHRIGRTGRAGAKGEAISFVSKDDFKNLCMIESRLGHLIVRKEIEGFAPRKEVPISILNYKPKRKPTPKN >Mature_397_residues PFSKLGLSDPILKAIDELGYKAPTPIQQKAIPVALTGKNLIAAAQTGTGKTASFVLPILEILSEDPTKVRAKRIRALILT PTRELAIQVEENIQQYSKHIDITSLAMYGGVDYKEQKQRLIEGVDVLVATPGRLLDMYTQRAIHFDELDILVLDEADRML DMGFIEDINKIIERLPLDRQNMLFSATLSDQVRYLAKTAINNPIEISISPKTTSSPQIDQWLTTVDKDKKSALLSHLIKE NNWNQALIFIETKHGAAKLVSQLEKRDIRAEAFHSGRSQEARAKVLNDFKEGKLQYLVATGIAARGIDIDELTRVVNYDL PFPADDYVHRIGRTGRAGAKGEAISFVSKDDFKNLCMIESRLGHLIVRKEIEGFAPRKEVPISILNYKPKRKPTPKN
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=360, Percent_Identity=39.4444444444444, Blast_Score=269, Evalue=4e-72, Organism=Homo sapiens, GI20149629, Length=374, Percent_Identity=37.9679144385027, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI41327771, Length=371, Percent_Identity=37.1967654986523, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI169881239, Length=387, Percent_Identity=38.7596899224806, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI13514809, Length=387, Percent_Identity=38.7596899224806, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI87196351, Length=366, Percent_Identity=39.6174863387978, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI301171467, Length=366, Percent_Identity=39.6174863387978, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI301171475, Length=366, Percent_Identity=39.6174863387978, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI41327773, Length=353, Percent_Identity=36.5439093484419, Blast_Score=244, Evalue=8e-65, Organism=Homo sapiens, GI164419743, Length=368, Percent_Identity=37.5, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI51094101, Length=368, Percent_Identity=37.5, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI222352149, Length=346, Percent_Identity=37.8612716763006, Blast_Score=241, Evalue=7e-64, Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=36.5921787709497, Blast_Score=238, Evalue=5e-63, Organism=Homo sapiens, GI262118318, Length=356, Percent_Identity=36.2359550561798, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI31542656, Length=394, Percent_Identity=36.5482233502538, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI262231852, Length=356, Percent_Identity=36.2359550561798, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI216548263, Length=356, Percent_Identity=36.2359550561798, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI148613856, Length=338, Percent_Identity=37.8698224852071, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI38201710, Length=338, Percent_Identity=37.8698224852071, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI164664518, Length=363, Percent_Identity=35.2617079889807, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI13518015, Length=356, Percent_Identity=36.2359550561798, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI41327776, Length=374, Percent_Identity=36.3636363636364, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=37.4301675977654, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI7661920, Length=359, Percent_Identity=34.2618384401114, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI188035877, Length=354, Percent_Identity=36.4406779661017, Blast_Score=227, Evalue=1e-59, Organism=Homo sapiens, GI45446747, Length=354, Percent_Identity=36.4406779661017, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI45446743, Length=354, Percent_Identity=36.4406779661017, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=35.5742296918768, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=36.1271676300578, Blast_Score=225, Evalue=5e-59, Organism=Homo sapiens, GI13514831, Length=358, Percent_Identity=36.5921787709497, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI21040371, Length=354, Percent_Identity=31.9209039548023, Blast_Score=202, Evalue=3e-52, Organism=Homo sapiens, GI4503529, Length=361, Percent_Identity=35.1800554016621, Blast_Score=201, Evalue=7e-52, Organism=Homo sapiens, GI83700235, Length=361, Percent_Identity=35.4570637119114, Blast_Score=201, Evalue=7e-52, Organism=Homo sapiens, GI4758112, Length=366, Percent_Identity=31.4207650273224, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI18375623, Length=366, Percent_Identity=31.4207650273224, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI38569503, Length=349, Percent_Identity=33.810888252149, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI38569505, Length=349, Percent_Identity=33.810888252149, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI38327634, Length=346, Percent_Identity=34.393063583815, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI13129006, Length=386, Percent_Identity=33.160621761658, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI50659095, Length=376, Percent_Identity=34.5744680851064, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI9506931, Length=418, Percent_Identity=30.8612440191388, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI17505907, Length=398, Percent_Identity=31.1557788944724, Blast_Score=185, Evalue=5e-47, Organism=Homo sapiens, GI6005743, Length=379, Percent_Identity=34.0369393139842, Blast_Score=181, Evalue=7e-46, Organism=Homo sapiens, GI8922886, Length=379, Percent_Identity=33.7730870712401, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI164419732, Length=372, Percent_Identity=33.0645161290323, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI62241022, Length=349, Percent_Identity=34.3839541547278, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI256223453, Length=366, Percent_Identity=28.6885245901639, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI62241024, Length=341, Percent_Identity=34.6041055718475, Blast_Score=162, Evalue=3e-40, Organism=Homo sapiens, GI256773275, Length=377, Percent_Identity=31.5649867374005, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI20336298, Length=214, Percent_Identity=38.3177570093458, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI4826686, Length=346, Percent_Identity=31.5028901734104, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI154759257, Length=420, Percent_Identity=26.9047619047619, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI9966805, Length=312, Percent_Identity=29.1666666666667, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=54.4973544973545, Blast_Score=411, Evalue=1e-116, Organism=Escherichia coli, GI87082221, Length=359, Percent_Identity=41.5041782729805, Blast_Score=283, Evalue=1e-77, Organism=Escherichia coli, GI1790214, Length=369, Percent_Identity=40.1084010840108, Blast_Score=263, Evalue=1e-71, Organism=Escherichia coli, GI1788930, Length=381, Percent_Identity=37.7952755905512, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI1787605, Length=363, Percent_Identity=36.3636363636364, Blast_Score=216, Evalue=3e-57, Organism=Escherichia coli, GI48994977, Length=401, Percent_Identity=23.6907730673317, Blast_Score=85, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17510307, Length=381, Percent_Identity=40.4199475065617, Blast_Score=260, Evalue=1e-69, Organism=Caenorhabditis elegans, GI17510309, Length=381, Percent_Identity=40.4199475065617, Blast_Score=259, Evalue=1e-69, Organism=Caenorhabditis elegans, GI71995514, Length=381, Percent_Identity=40.4199475065617, Blast_Score=259, Evalue=1e-69, Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=36.1477572559367, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=36.9146005509642, Blast_Score=254, Evalue=7e-68, Organism=Caenorhabditis elegans, GI17510559, Length=384, Percent_Identity=35.9375, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI71995718, Length=365, Percent_Identity=40, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI71987143, Length=361, Percent_Identity=36.01108033241, Blast_Score=238, Evalue=3e-63, Organism=Caenorhabditis elegans, GI71995724, Length=359, Percent_Identity=36.2116991643454, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17507121, Length=359, Percent_Identity=35.933147632312, Blast_Score=231, Evalue=5e-61, Organism=Caenorhabditis elegans, GI115533224, Length=347, Percent_Identity=38.0403458213257, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17537549, Length=369, Percent_Identity=36.8563685636856, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI17552114, Length=361, Percent_Identity=34.3490304709141, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI86570094, Length=351, Percent_Identity=35.8974358974359, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17552642, Length=388, Percent_Identity=35.0515463917526, Blast_Score=223, Evalue=9e-59, Organism=Caenorhabditis elegans, GI71999646, Length=364, Percent_Identity=33.7912087912088, Blast_Score=217, Evalue=9e-57, Organism=Caenorhabditis elegans, GI71999644, Length=353, Percent_Identity=33.9943342776204, Blast_Score=215, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17507945, Length=340, Percent_Identity=36.1764705882353, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=34.5013477088949, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17509811, Length=358, Percent_Identity=34.9162011173184, Blast_Score=207, Evalue=6e-54, Organism=Caenorhabditis elegans, GI115532546, Length=372, Percent_Identity=34.4086021505376, Blast_Score=207, Evalue=7e-54, Organism=Caenorhabditis elegans, GI115532548, Length=372, Percent_Identity=34.4086021505376, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=34.5013477088949, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=34.6774193548387, Blast_Score=200, Evalue=8e-52, Organism=Caenorhabditis elegans, GI71982858, Length=366, Percent_Identity=31.4207650273224, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17505370, Length=340, Percent_Identity=34.1176470588235, Blast_Score=184, Evalue=8e-47, Organism=Caenorhabditis elegans, GI17508543, Length=374, Percent_Identity=29.6791443850267, Blast_Score=177, Evalue=9e-45, Organism=Caenorhabditis elegans, GI193208216, Length=383, Percent_Identity=32.1148825065274, Blast_Score=171, Evalue=5e-43, Organism=Caenorhabditis elegans, GI25148203, Length=420, Percent_Identity=28.0952380952381, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17536099, Length=382, Percent_Identity=32.9842931937173, Blast_Score=168, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17536101, Length=382, Percent_Identity=32.9842931937173, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI193206561, Length=382, Percent_Identity=28.7958115183246, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17536103, Length=382, Percent_Identity=32.9842931937173, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI71990816, Length=351, Percent_Identity=33.6182336182336, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17553716, Length=385, Percent_Identity=29.0909090909091, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17507641, Length=412, Percent_Identity=28.6407766990291, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17556951, Length=357, Percent_Identity=28.8515406162465, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI32564046, Length=397, Percent_Identity=28.463476070529, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71997889, Length=364, Percent_Identity=28.8461538461538, Blast_Score=127, Evalue=8e-30, Organism=Caenorhabditis elegans, GI25148205, Length=345, Percent_Identity=26.6666666666667, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=31.3725490196078, Blast_Score=114, Evalue=6e-26, Organism=Caenorhabditis elegans, GI25148291, Length=328, Percent_Identity=27.7439024390244, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17557982, Length=387, Percent_Identity=25.0645994832041, Blast_Score=88, Evalue=7e-18, Organism=Caenorhabditis elegans, GI71987152, Length=88, Percent_Identity=44.3181818181818, Blast_Score=85, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6325138, Length=367, Percent_Identity=40.0544959128065, Blast_Score=253, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6323021, Length=355, Percent_Identity=38.3098591549296, Blast_Score=249, Evalue=6e-67, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=38.135593220339, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6324778, Length=365, Percent_Identity=38.9041095890411, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6321856, Length=373, Percent_Identity=37.5335120643432, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6320041, Length=362, Percent_Identity=36.4640883977901, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6320224, Length=362, Percent_Identity=35.6353591160221, Blast_Score=236, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=39.1666666666667, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6320449, Length=355, Percent_Identity=36.056338028169, Blast_Score=215, Evalue=8e-57, Organism=Saccharomyces cerevisiae, GI6320173, Length=421, Percent_Identity=31.353919239905, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6323947, Length=357, Percent_Identity=33.6134453781513, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6324620, Length=376, Percent_Identity=35.3723404255319, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6320119, Length=384, Percent_Identity=32.5520833333333, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=351, Percent_Identity=34.4729344729345, Blast_Score=193, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=351, Percent_Identity=34.4729344729345, Blast_Score=193, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6322427, Length=354, Percent_Identity=33.3333333333333, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6321963, Length=381, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6319714, Length=378, Percent_Identity=29.6296296296296, Blast_Score=182, Evalue=8e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=378, Percent_Identity=31.7460317460317, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6320400, Length=410, Percent_Identity=30.9756097560976, Blast_Score=170, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=360, Percent_Identity=31.3888888888889, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=411, Percent_Identity=29.4403892944039, Blast_Score=156, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6319618, Length=458, Percent_Identity=29.2576419213974, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=429, Percent_Identity=29.3706293706294, Blast_Score=145, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6324366, Length=357, Percent_Identity=26.890756302521, Blast_Score=113, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6321374, Length=403, Percent_Identity=25.0620347394541, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6323844, Length=366, Percent_Identity=22.9508196721311, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24584399, Length=347, Percent_Identity=40.0576368876081, Blast_Score=274, Evalue=6e-74, Organism=Drosophila melanogaster, GI24585582, Length=365, Percent_Identity=38.3561643835616, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI24642151, Length=351, Percent_Identity=36.7521367521368, Blast_Score=253, Evalue=1e-67, Organism=Drosophila melanogaster, GI24584994, Length=379, Percent_Identity=36.4116094986807, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI24644487, Length=359, Percent_Identity=37.883008356546, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI45551833, Length=359, Percent_Identity=37.883008356546, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI24644485, Length=359, Percent_Identity=37.883008356546, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI24644483, Length=359, Percent_Identity=37.883008356546, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI24644479, Length=359, Percent_Identity=37.883008356546, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI281361218, Length=359, Percent_Identity=37.883008356546, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI24644481, Length=359, Percent_Identity=37.883008356546, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI28574962, Length=354, Percent_Identity=37.2881355932203, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI21356161, Length=356, Percent_Identity=38.2022471910112, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI17985987, Length=376, Percent_Identity=38.563829787234, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI18857967, Length=364, Percent_Identity=37.0879120879121, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI21355075, Length=348, Percent_Identity=39.0804597701149, Blast_Score=238, Evalue=4e-63, Organism=Drosophila melanogaster, GI24583281, Length=362, Percent_Identity=35.3591160220994, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI24583279, Length=362, Percent_Identity=35.3591160220994, Blast_Score=234, Evalue=7e-62, Organism=Drosophila melanogaster, GI17977678, Length=389, Percent_Identity=35.73264781491, Blast_Score=234, Evalue=7e-62, Organism=Drosophila melanogaster, GI24662330, Length=375, Percent_Identity=35.7333333333333, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI17136814, Length=374, Percent_Identity=39.0374331550802, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI28575014, Length=359, Percent_Identity=36.4902506963788, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24645031, Length=359, Percent_Identity=34.5403899721448, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI281365720, Length=310, Percent_Identity=36.1290322580645, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24582080, Length=359, Percent_Identity=34.5403899721448, Blast_Score=201, Evalue=5e-52, Organism=Drosophila melanogaster, GI24582078, Length=359, Percent_Identity=34.5403899721448, Blast_Score=201, Evalue=5e-52, Organism=Drosophila melanogaster, GI17136248, Length=359, Percent_Identity=34.5403899721448, Blast_Score=201, Evalue=5e-52, Organism=Drosophila melanogaster, GI24582075, Length=359, Percent_Identity=34.5403899721448, Blast_Score=201, Evalue=5e-52, Organism=Drosophila melanogaster, GI24581954, Length=366, Percent_Identity=32.2404371584699, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24581952, Length=366, Percent_Identity=32.2404371584699, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24581956, Length=366, Percent_Identity=32.2404371584699, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=34.6560846560847, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI28571808, Length=347, Percent_Identity=32.2766570605187, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI28571809, Length=347, Percent_Identity=32.2766570605187, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24642822, Length=364, Percent_Identity=31.3186813186813, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24643725, Length=422, Percent_Identity=29.6208530805687, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24666101, Length=347, Percent_Identity=32.8530259365994, Blast_Score=172, Evalue=2e-43, Organism=Drosophila melanogaster, GI17647335, Length=357, Percent_Identity=31.0924369747899, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI20130173, Length=445, Percent_Identity=28.7640449438202, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI24640164, Length=367, Percent_Identity=25.8855585831063, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI19920478, Length=342, Percent_Identity=29.8245614035088, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI28571338, Length=228, Percent_Identity=36.4035087719298, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI18859659, Length=228, Percent_Identity=36.4035087719298, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24668515, Length=365, Percent_Identity=29.041095890411, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI17136666, Length=415, Percent_Identity=25.7831325301205, Blast_Score=130, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 44618; Mature: 44487
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFSKLGLSDPILKAIDELGYKAPTPIQQKAIPVALTGKNLIAAAQTGTGKTASFVLPIL CCCCCCCCCCHHHHHHHHCCCCCCCCHHHCCEEEEEECCCEEEEECCCCCCHHHHHHHHH EILSEDPTKVRAKRIRALILTPTRELAIQVEENIQQYSKHIDITSLAMYGGVDYKEQKQR HHHCCCHHHHHHHHHEEEEECCHHHHHEEHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH LIEGVDVLVATPGRLLDMYTQRAIHFDELDILVLDEADRMLDMGFIEDINKIIERLPLDR HHHHCCEEEECCHHHHHHHHHHHCEECCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCH QNMLFSATLSDQVRYLAKTAINNPIEISISPKTTSSPQIDQWLTTVDKDKKSALLSHLIK HHEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH ENNWNQALIFIETKHGAAKLVSQLEKRDIRAEAFHSGRSQEARAKVLNDFKEGKLQYLVA CCCCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEE TGIAARGIDIDELTRVVNYDLPFPADDYVHRIGRTGRAGAKGEAISFVSKDDFKNLCMIE CCCHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHH SRLGHLIVRKEIEGFAPRKEVPISILNYKPKRKPTPKN HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure PFSKLGLSDPILKAIDELGYKAPTPIQQKAIPVALTGKNLIAAAQTGTGKTASFVLPIL CCCCCCCCCHHHHHHHHCCCCCCCCHHHCCEEEEEECCCEEEEECCCCCCHHHHHHHHH EILSEDPTKVRAKRIRALILTPTRELAIQVEENIQQYSKHIDITSLAMYGGVDYKEQKQR HHHCCCHHHHHHHHHEEEEECCHHHHHEEHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH LIEGVDVLVATPGRLLDMYTQRAIHFDELDILVLDEADRMLDMGFIEDINKIIERLPLDR HHHHCCEEEECCHHHHHHHHHHHCEECCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCH QNMLFSATLSDQVRYLAKTAINNPIEISISPKTTSSPQIDQWLTTVDKDKKSALLSHLIK HHEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH ENNWNQALIFIETKHGAAKLVSQLEKRDIRAEAFHSGRSQEARAKVLNDFKEGKLQYLVA CCCCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEE TGIAARGIDIDELTRVVNYDLPFPADDYVHRIGRTGRAGAKGEAISFVSKDDFKNLCMIE CCCHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHH SRLGHLIVRKEIEGFAPRKEVPISILNYKPKRKPTPKN HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]