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The map label for this gene is rutD [H]

Identifier: 59712322

GI number: 59712322

Start: 1931728

End: 1932525

Strand: Reverse

Name: rutD [H]

Synonym: VF_1715

Alternate gene names: 59712322

Gene position: 1932525-1931728 (Counterclockwise)

Preceding gene: 59712323

Following gene: 59712320

Centisome position: 66.7

GC content: 36.34

Gene sequence:

>798_bases
ATGTCTGAGTCTTTATTATTCCATAGAACCTATGAGCATGAATCGAGCTCTAAGTGGGTAGTGTTTGTCCATGGTGCGGG
TGGAAGCTCAACAACATGGTTTAAGCAAATCGCTGCTTTTAGAAAGAATTTTAATGTATTGCTCATTGATTTACGTGGTC
ATGGACGTTCGAACCATTTCTCCCAAATCAAAGAATTCATCAATAAACAGTATTCTTTTAAAGTGGTAAGTCAGGATATT
TTAGATGTACTTGATCATCTTAATATTAAATCTGCGCACTTTGTTGGTATGTCTCTTGGTACGATTATTATTCGAAACTT
GGCTGAATTAGCACAAGACCGTGTAAGCTCAATGGTATTAGCTGGAGCGATTACTCGTTTTAATTTTCGCTCTCAGTTTT
TGATTAAAATGGGCGATATGACAAAGAATATCATGCCTTATATGTGGCTTTATAAGTTGTTTTCTTATGTGGTGATGCCG
CAAAAAAGCCAAAAAGAATCTCGACATGTGTTCACTCGTGAAGCTAAAAAATTGTGTCAAAAAGAGTTTAAGCGTTGGTT
TAAATTAGCTGCTGACGTGAATCCGTTAATGCGTTACTTCAAAGATAAAGAGTTAGCGATCCCAACACTTTATTTGATGG
GAGCAAATGATTATTTGTTTATGAAACCAGTGGAAGAGATGGTGGCAGTACACCAACACAGTCAGCTATTACAAATCCCT
GAATGTGGGCATGTGTGTAATATTGATAGACCAAAAGAATTTAATAAATACGCAATAGAGTTTATTGCGGCTCAATAA

Upstream 100 bases:

>100_bases
ATATATTAATGCTGTGATGGGAAATGCAGTGTGAAGTATTCATCTTCTATTTGAAATGCTATAGTCAATGTTAACGTAAA
TTTTGAATGAAGTTGAAAGG

Downstream 100 bases:

>100_bases
CAATGAATTAAAAATAAAAACGGCGATCATAATGATCGCCGTTTCTTATTTCAGTCTTTAAAGAATAACGGTTTTATTGC
CGTAAACAAAAACGTGATCG

Product: tetranactin resistance protein

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSESLLFHRTYEHESSSKWVVFVHGAGGSSTTWFKQIAAFRKNFNVLLIDLRGHGRSNHFSQIKEFINKQYSFKVVSQDI
LDVLDHLNIKSAHFVGMSLGTIIIRNLAELAQDRVSSMVLAGAITRFNFRSQFLIKMGDMTKNIMPYMWLYKLFSYVVMP
QKSQKESRHVFTREAKKLCQKEFKRWFKLAADVNPLMRYFKDKELAIPTLYLMGANDYLFMKPVEEMVAVHQHSQLLQIP
ECGHVCNIDRPKEFNKYAIEFIAAQ

Sequences:

>Translated_265_residues
MSESLLFHRTYEHESSSKWVVFVHGAGGSSTTWFKQIAAFRKNFNVLLIDLRGHGRSNHFSQIKEFINKQYSFKVVSQDI
LDVLDHLNIKSAHFVGMSLGTIIIRNLAELAQDRVSSMVLAGAITRFNFRSQFLIKMGDMTKNIMPYMWLYKLFSYVVMP
QKSQKESRHVFTREAKKLCQKEFKRWFKLAADVNPLMRYFKDKELAIPTLYLMGANDYLFMKPVEEMVAVHQHSQLLQIP
ECGHVCNIDRPKEFNKYAIEFIAAQ
>Mature_264_residues
SESLLFHRTYEHESSSKWVVFVHGAGGSSTTWFKQIAAFRKNFNVLLIDLRGHGRSNHFSQIKEFINKQYSFKVVSQDIL
DVLDHLNIKSAHFVGMSLGTIIIRNLAELAQDRVSSMVLAGAITRFNFRSQFLIKMGDMTKNIMPYMWLYKLFSYVVMPQ
KSQKESRHVFTREAKKLCQKEFKRWFKLAADVNPLMRYFKDKELAIPTLYLMGANDYLFMKPVEEMVAVHQHSQLLQIPE
CGHVCNIDRPKEFNKYAIEFIAAQ

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 30901; Mature: 30770

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESLLFHRTYEHESSSKWVVFVHGAGGSSTTWFKQIAAFRKNFNVLLIDLRGHGRSNHF
CCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHH
SQIKEFINKQYSFKVVSQDILDVLDHLNIKSAHFVGMSLGTIIIRNLAELAQDRVSSMVL
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAITRFNFRSQFLIKMGDMTKNIMPYMWLYKLFSYVVMPQKSQKESRHVFTREAKKLCQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
KEFKRWFKLAADVNPLMRYFKDKELAIPTLYLMGANDYLFMKPVEEMVAVHQHSQLLQIP
HHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCEEEECCHHHHHHHHHHHHHCCCC
ECGHVCNIDRPKEFNKYAIEFIAAQ
CCCCCCCCCCCCHHHHHHHHHEECC
>Mature Secondary Structure 
SESLLFHRTYEHESSSKWVVFVHGAGGSSTTWFKQIAAFRKNFNVLLIDLRGHGRSNHF
CCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHH
SQIKEFINKQYSFKVVSQDILDVLDHLNIKSAHFVGMSLGTIIIRNLAELAQDRVSSMVL
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAITRFNFRSQFLIKMGDMTKNIMPYMWLYKLFSYVVMPQKSQKESRHVFTREAKKLCQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
KEFKRWFKLAADVNPLMRYFKDKELAIPTLYLMGANDYLFMKPVEEMVAVHQHSQLLQIP
HHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCEEEECCHHHHHHHHHHHHHCCCC
ECGHVCNIDRPKEFNKYAIEFIAAQ
CCCCCCCCCCCCHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA