| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is ansA [H]
Identifier: 59712251
GI number: 59712251
Start: 1850444
End: 1851457
Strand: Direct
Name: ansA [H]
Synonym: VF_1644
Alternate gene names: 59712251
Gene position: 1850444-1851457 (Clockwise)
Preceding gene: 59712250
Following gene: 59712253
Centisome position: 63.86
GC content: 41.22
Gene sequence:
>1014_bases ATGGAAAGAAAACACATTTACATCGCCTATACTGGCGGCACAATCGGCATGATAAAGTCTGATGATCATGGTTATGTTCC AGCTGCTGGATTCATGCAACATCAACTTAAACAAATGCCAGAGTTCCATCGTGCAGAAATGCCAATTTTCACCATTCACG AATACGAGCCTTTGATTGACTCTTCAGACATGACGCCTGAAGACTGGCAACGTATTGCTGACGATATTCGTGCTAATTAC GACAAATACGACGGATTTGTGATTCTTCATGGTACGGACACCATGGCCTACACAGCATCGGCTCTTTCTTTCATGCTAGA GAACCTTGGAAAACCAGTTATTGTTACTGGCTCTCAAATTCCTCTTGCAGAACTTCGCTCTGATGGCCAAAGCAACTTAT TAAATGCACTGCATATCGCAGCAAATTACCCTATCAATGAAGTAACGTTATTCTTTAATAACAAATTGATCCGTGGTAAT CGCAGTACTAAGTCACATGCAGATGGTTTTGATGCGTTTTCTTCACCAAACTTACCACCTTTATTAGAGGCTGGTATTAA TATTCAAATTAATGGTGCAGAAATCAACAAACAGCCTGAAGGTGAGTTCACAGTAAATAACATTACACCACAACCAATCG GTGTCGTGACAATGTATCCTGGGATCTCGGCAGAAGTGATCAAAAATACACTACGCCAACCAGTCAATGCGATGATCTTA CTGACCTTTGGTGTGGGTAATGCGCCACAAAACCCTGAGCTTCTTGCGCAATTAAAAGAAGCATCTGAACGTGGCGTTGT CGTGGTTAACTTGACTCAATGTTTATCTGGAAAAGTAAACATGGGTGGCTATGCAACAGGCTGTGCTCTAGCTGAAGCTG GAGTAATTAGTGGTTATGATATGACACCAGAAGCTGCTCTAGCTAAACTTCATTATATTCTAAGCAAAGAATTACCGTAT GAAACCATGCGTACTATGATGCAACAGAATTTATGTGGTGAACTAACGCATTAA
Upstream 100 bases:
>100_bases ATCTTTAAAAGCATGACGAGCCCGACACATGTCGGGCTTTCTTTATGCCAAATGCACAGTATAATCCCCCCACCTCCCAT AACTCTGTACCGTTGTTATT
Downstream 100 bases:
>100_bases TTTCGATTTACGTAATACAAAAAAGGCTTCCCTGAATTCTCATGGGAAGCCTTTTTTAATTCTAGATAATTAACCGTAAA TTATCTTTTTTCGTTCAAAA
Product: cytoplasmic asparaginase I
Products: NA
Alternate protein names: L-asparaginase I; L-ASNase I; L-asparagine amidohydrolase I [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MERKHIYIAYTGGTIGMIKSDDHGYVPAAGFMQHQLKQMPEFHRAEMPIFTIHEYEPLIDSSDMTPEDWQRIADDIRANY DKYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQSNLLNALHIAANYPINEVTLFFNNKLIRGN RSTKSHADGFDAFSSPNLPPLLEAGINIQINGAEINKQPEGEFTVNNITPQPIGVVTMYPGISAEVIKNTLRQPVNAMIL LTFGVGNAPQNPELLAQLKEASERGVVVVNLTQCLSGKVNMGGYATGCALAEAGVISGYDMTPEAALAKLHYILSKELPY ETMRTMMQQNLCGELTH
Sequences:
>Translated_337_residues MERKHIYIAYTGGTIGMIKSDDHGYVPAAGFMQHQLKQMPEFHRAEMPIFTIHEYEPLIDSSDMTPEDWQRIADDIRANY DKYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQSNLLNALHIAANYPINEVTLFFNNKLIRGN RSTKSHADGFDAFSSPNLPPLLEAGINIQINGAEINKQPEGEFTVNNITPQPIGVVTMYPGISAEVIKNTLRQPVNAMIL LTFGVGNAPQNPELLAQLKEASERGVVVVNLTQCLSGKVNMGGYATGCALAEAGVISGYDMTPEAALAKLHYILSKELPY ETMRTMMQQNLCGELTH >Mature_337_residues MERKHIYIAYTGGTIGMIKSDDHGYVPAAGFMQHQLKQMPEFHRAEMPIFTIHEYEPLIDSSDMTPEDWQRIADDIRANY DKYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQSNLLNALHIAANYPINEVTLFFNNKLIRGN RSTKSHADGFDAFSSPNLPPLLEAGINIQINGAEINKQPEGEFTVNNITPQPIGVVTMYPGISAEVIKNTLRQPVNAMIL LTFGVGNAPQNPELLAQLKEASERGVVVVNLTQCLSGKVNMGGYATGCALAEAGVISGYDMTPEAALAKLHYILSKELPY ETMRTMMQQNLCGELTH
Specific function: Unknown
COG id: COG0252
COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asparaginase 1 family [H]
Homologues:
Organism=Homo sapiens, GI122937331, Length=359, Percent_Identity=45.125348189415, Blast_Score=279, Evalue=2e-75, Organism=Escherichia coli, GI1788065, Length=336, Percent_Identity=74.7023809523809, Blast_Score=517, Evalue=1e-148, Organism=Escherichia coli, GI1789327, Length=283, Percent_Identity=26.5017667844523, Blast_Score=79, Evalue=6e-16, Organism=Caenorhabditis elegans, GI193207372, Length=361, Percent_Identity=47.0914127423823, Blast_Score=311, Evalue=3e-85, Organism=Caenorhabditis elegans, GI17558280, Length=361, Percent_Identity=47.0914127423823, Blast_Score=311, Evalue=3e-85, Organism=Caenorhabditis elegans, GI17558278, Length=361, Percent_Identity=47.0914127423823, Blast_Score=311, Evalue=3e-85, Organism=Caenorhabditis elegans, GI193207374, Length=361, Percent_Identity=47.0914127423823, Blast_Score=311, Evalue=4e-85, Organism=Saccharomyces cerevisiae, GI6320527, Length=180, Percent_Identity=30, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI24639609, Length=364, Percent_Identity=43.6813186813187, Blast_Score=298, Evalue=3e-81, Organism=Drosophila melanogaster, GI24645530, Length=359, Percent_Identity=45.125348189415, Blast_Score=291, Evalue=4e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006033 - InterPro: IPR006034 - InterPro: IPR020827 [H]
Pfam domain/function: PF00710 Asparaginase [H]
EC number: =3.5.1.1 [H]
Molecular weight: Translated: 36989; Mature: 36989
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00144 ASN_GLN_ASE_1 ; PS00917 ASN_GLN_ASE_2 ; PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKHIYIAYTGGTIGMIKSDDHGYVPAAGFMQHQLKQMPEFHRAEMPIFTIHEYEPLID CCCCEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCC SSDMTPEDWQRIADDIRANYDKYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQI CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCC PLAELRSDGQSNLLNALHIAANYPINEVTLFFNNKLIRGNRSTKSHADGFDAFSSPNLPP CHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCH LLEAGINIQINGAEINKQPEGEFTVNNITPQPIGVVTMYPGISAEVIKNTLRQPVNAMIL HHHCCCEEEEECCCCCCCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEE LTFGVGNAPQNPELLAQLKEASERGVVVVNLTQCLSGKVNMGGYATGCALAEAGVISGYD EEECCCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHCCCCCCCC MTPEAALAKLHYILSKELPYETMRTMMQQNLCGELTH CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MERKHIYIAYTGGTIGMIKSDDHGYVPAAGFMQHQLKQMPEFHRAEMPIFTIHEYEPLID CCCCEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCC SSDMTPEDWQRIADDIRANYDKYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQI CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCC PLAELRSDGQSNLLNALHIAANYPINEVTLFFNNKLIRGNRSTKSHADGFDAFSSPNLPP CHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCH LLEAGINIQINGAEINKQPEGEFTVNNITPQPIGVVTMYPGISAEVIKNTLRQPVNAMIL HHHCCCEEEEECCCCCCCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEE LTFGVGNAPQNPELLAQLKEASERGVVVVNLTQCLSGKVNMGGYATGCALAEAGVISGYD EEECCCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHCCCCCCCC MTPEAALAKLHYILSKELPYETMRTMMQQNLCGELTH CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]