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The map label for this gene is 59711984

Identifier: 59711984

GI number: 59711984

Start: 1523274

End: 1524074

Strand: Reverse

Name: 59711984

Synonym: VF_1377

Alternate gene names: NA

Gene position: 1524074-1523274 (Counterclockwise)

Preceding gene: 59711986

Following gene: 59711983

Centisome position: 52.6

GC content: 40.82

Gene sequence:

>801_bases
ATGGATCAAGGACTATCGCTCAATACACTGCCTCTTAAAGAATTGCGTAATCTTATTAGAAATAATCAATTTACGGGTTC
GACAACGGGTTGTGCTGCAGGATATTTACAAGCTAACCTTGTTATATTACCAGCTGAGTGGGCAACCGATTTTTTGCTGT
TTTGTCAAAAAAATCCGGTGGCGTGTCCTTTAATTGATGTTACCCAACCAGGAGAAAAGTACCTGCAATCGATCGGGAGG
GATATTGATTTATCAACTGACGTTCCTGAATATCATGTTTTTTATGATGGCGAATTTGAAACCGCAGTCTCTGATCTTTC
CACATTATGGAGAGAAGATTTAGTTACTTTTGTTTTAGGGTGCTCTTTCTCGTTTGAAGAGGCGTTAATACAATCTGGTT
TATCCATCCGAAATATCGATGAAGGGAAGAACGTCTCAATGTATGACACCAGTATTCCTTGCCAATCATCAGGAAAGTTC
AGTGGAAACTATGTGGTGTCAATGCGCCCATTCACTTCCATTGATGCCATTCGTGCTATTCAAATCACTACTCGTTTTCC
TAAAGCGCATGGAGCGCCAGTTCACTTTGGCGATCCAAGCCTTATTGGAATTAACGATATATCAACTCCAAACTATGGCG
ATGCCGTTGAAATAAAACCAAATGAAGTGCCTGTTTTTTGGGGGTGTGGCGTTACACCACAAAATGTTATTCGTCAGAGT
CGACCGCCATTTTGTATTACTCATGCTCCGGGAAAAATGTTGATCACTGATCGTCTAAGTTCAGAGTTTGCTGTGCTTTA
A

Upstream 100 bases:

>100_bases
TATCAAGAATAGCAGAAAAATACGAATAGACATTATATAAATAAGCAGTAATGTAACTCTTGGTTAACGATAAAATTACA
AATAACGAAAGGATTGTTAT

Downstream 100 bases:

>100_bases
AGCATACATTTATTGTTACTACCAAATTTAATAATTAAGGAGCAGGGAATGAGAATTAATTGTGATATGGGCGAAAGTTT
CGGTTTATGGCAATTAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MDQGLSLNTLPLKELRNLIRNNQFTGSTTGCAAGYLQANLVILPAEWATDFLLFCQKNPVACPLIDVTQPGEKYLQSIGR
DIDLSTDVPEYHVFYDGEFETAVSDLSTLWREDLVTFVLGCSFSFEEALIQSGLSIRNIDEGKNVSMYDTSIPCQSSGKF
SGNYVVSMRPFTSIDAIRAIQITTRFPKAHGAPVHFGDPSLIGINDISTPNYGDAVEIKPNEVPVFWGCGVTPQNVIRQS
RPPFCITHAPGKMLITDRLSSEFAVL

Sequences:

>Translated_266_residues
MDQGLSLNTLPLKELRNLIRNNQFTGSTTGCAAGYLQANLVILPAEWATDFLLFCQKNPVACPLIDVTQPGEKYLQSIGR
DIDLSTDVPEYHVFYDGEFETAVSDLSTLWREDLVTFVLGCSFSFEEALIQSGLSIRNIDEGKNVSMYDTSIPCQSSGKF
SGNYVVSMRPFTSIDAIRAIQITTRFPKAHGAPVHFGDPSLIGINDISTPNYGDAVEIKPNEVPVFWGCGVTPQNVIRQS
RPPFCITHAPGKMLITDRLSSEFAVL
>Mature_266_residues
MDQGLSLNTLPLKELRNLIRNNQFTGSTTGCAAGYLQANLVILPAEWATDFLLFCQKNPVACPLIDVTQPGEKYLQSIGR
DIDLSTDVPEYHVFYDGEFETAVSDLSTLWREDLVTFVLGCSFSFEEALIQSGLSIRNIDEGKNVSMYDTSIPCQSSGKF
SGNYVVSMRPFTSIDAIRAIQITTRFPKAHGAPVHFGDPSLIGINDISTPNYGDAVEIKPNEVPVFWGCGVTPQNVIRQS
RPPFCITHAPGKMLITDRLSSEFAVL

Specific function: Unknown

COG id: COG4336

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0317 family

Homologues:

Organism=Homo sapiens, GI156139135, Length=249, Percent_Identity=33.7349397590361, Blast_Score=136, Evalue=2e-32,
Organism=Homo sapiens, GI156139133, Length=249, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI156139131, Length=249, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI156139129, Length=249, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI156139137, Length=249, Percent_Identity=31.7269076305221, Blast_Score=105, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1458_VIBFM (B5FEB2)

Other databases:

- EMBL:   CP001139
- RefSeq:   YP_002156177.1
- ProteinModelPortal:   B5FEB2
- SMR:   B5FEB2
- GeneID:   6807040
- GenomeReviews:   CP001139_GR
- KEGG:   vfm:VFMJ11_1458
- HOGENOM:   HBG289473
- OMA:   GPMVVSM
- ProtClustDB:   PRK05463
- HAMAP:   MF_01830
- InterPro:   IPR009906
- InterPro:   IPR016938
- PIRSF:   PIRSF029755

Pfam domain/function: PF07286 DUF1445

EC number: NA

Molecular weight: Translated: 29276; Mature: 29276

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQGLSLNTLPLKELRNLIRNNQFTGSTTGCAAGYLQANLVILPAEWATDFLLFCQKNPV
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHEEEEEEEEEECHHHCCEEEEECCCCC
ACPLIDVTQPGEKYLQSIGRDIDLSTDVPEYHVFYDGEFETAVSDLSTLWREDLVTFVLG
CCEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHC
CSFSFEEALIQSGLSIRNIDEGKNVSMYDTSIPCQSSGKFSGNYVVSMRPFTSIDAIRAI
CCCCHHHHHHHCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
QITTRFPKAHGAPVHFGDPSLIGINDISTPNYGDAVEIKPNEVPVFWGCGVTPQNVIRQS
EEEEECCCCCCCEEEECCCCEEEECCCCCCCCCCEEEECCCCCCEEEECCCCHHHHHHCC
RPPFCITHAPGKMLITDRLSSEFAVL
CCCEEEEECCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MDQGLSLNTLPLKELRNLIRNNQFTGSTTGCAAGYLQANLVILPAEWATDFLLFCQKNPV
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHEEEEEEEEEECHHHCCEEEEECCCCC
ACPLIDVTQPGEKYLQSIGRDIDLSTDVPEYHVFYDGEFETAVSDLSTLWREDLVTFVLG
CCEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHC
CSFSFEEALIQSGLSIRNIDEGKNVSMYDTSIPCQSSGKFSGNYVVSMRPFTSIDAIRAI
CCCCHHHHHHHCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
QITTRFPKAHGAPVHFGDPSLIGINDISTPNYGDAVEIKPNEVPVFWGCGVTPQNVIRQS
EEEEECCCCCCCEEEECCCCEEEECCCCCCCCCCEEEECCCCCCEEEECCCCHHHHHHCC
RPPFCITHAPGKMLITDRLSSEFAVL
CCCEEEEECCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA