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The map label for this gene is ybgL [C]

Identifier: 59711983

GI number: 59711983

Start: 1522482

End: 1523225

Strand: Reverse

Name: ybgL [C]

Synonym: VF_1376

Alternate gene names: 59711983

Gene position: 1523225-1522482 (Counterclockwise)

Preceding gene: 59711984

Following gene: 59711982

Centisome position: 52.57

GC content: 41.8

Gene sequence:

>744_bases
ATGAGAATTAATTGTGATATGGGCGAAAGTTTCGGTTTATGGCAATTAGGTAATGACAGTGCAGTGATGCCAGCGTTAGA
TATGGCGAATATTGCATGTGGTATGCATGCTTCAGATCCAAGTGTCATGATGAAAACAGTTGCACTGGCAAAGGCGCATG
GCGTGACGATTGGAGCTCACCCTGGTTATAACGACATTCAAGGTTTTGGTCGACGTGATATATCAATGGATTCAGACGAT
TTAGCTGCGCTGTTTATCTATCAGTTAGGTGCGTTAGAAGGAGTCTGTCAAAGTCAGCAGACCTCGTTGAGCTATGTAAA
ACCACATGGCGCATTATATAACGCAATGATGAAAAATGACGCTATTCTTCAAACGTTATTAGAAGCCTTGAAGCGATATG
ATGCGACGTTACCTTTGGTCATTATGGCCGTTCCTGATCATCAACGTTATGTAGATATGGCGAAAGAGTATGGCATTACA
CTTTGGTTTGAAGCCTTTGTAGACAGAGCATATGACGAGCAAGGGCGTCTAGTCCCAAGAAGTGTTCCCGGTTCAAGCCA
TCAATCAGATGAAGCCATACAAAAACAAGCAAATCAATTAATAGATGAAGGCTGTGTGACGACCTTAAATGGCGACATTA
TAAAAATACACGCAGATACATTGTGTATTCATGGGGACGGACCATTTGCTGTCTCTACGGCTGAATATCTACGAAAAAAA
TTAAAATCAAAGTCGGAGTCATGA

Upstream 100 bases:

>100_bases
GGGAAAAATGTTGATCACTGATCGTCTAAGTTCAGAGTTTGCTGTGCTTTAAAGCATACATTTATTGTTACTACCAAATT
TAATAATTAAGGAGCAGGGA

Downstream 100 bases:

>100_bases
TGAAAATATCCGCTGTCAATGAATCGACTTTGTTACTTACCTTTGCTGATAAAGTCAGTCCTGAAGTCGCTGATATGATT
GCTGAATCAGTCACTCTTTT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRINCDMGESFGLWQLGNDSAVMPALDMANIACGMHASDPSVMMKTVALAKAHGVTIGAHPGYNDIQGFGRRDISMDSDD
LAALFIYQLGALEGVCQSQQTSLSYVKPHGALYNAMMKNDAILQTLLEALKRYDATLPLVIMAVPDHQRYVDMAKEYGIT
LWFEAFVDRAYDEQGRLVPRSVPGSSHQSDEAIQKQANQLIDEGCVTTLNGDIIKIHADTLCIHGDGPFAVSTAEYLRKK
LKSKSES

Sequences:

>Translated_247_residues
MRINCDMGESFGLWQLGNDSAVMPALDMANIACGMHASDPSVMMKTVALAKAHGVTIGAHPGYNDIQGFGRRDISMDSDD
LAALFIYQLGALEGVCQSQQTSLSYVKPHGALYNAMMKNDAILQTLLEALKRYDATLPLVIMAVPDHQRYVDMAKEYGIT
LWFEAFVDRAYDEQGRLVPRSVPGSSHQSDEAIQKQANQLIDEGCVTTLNGDIIKIHADTLCIHGDGPFAVSTAEYLRKK
LKSKSES
>Mature_247_residues
MRINCDMGESFGLWQLGNDSAVMPALDMANIACGMHASDPSVMMKTVALAKAHGVTIGAHPGYNDIQGFGRRDISMDSDD
LAALFIYQLGALEGVCQSQQTSLSYVKPHGALYNAMMKNDAILQTLLEALKRYDATLPLVIMAVPDHQRYVDMAKEYGIT
LWFEAFVDRAYDEQGRLVPRSVPGSSHQSDEAIQKQANQLIDEGCVTTLNGDIIKIHADTLCIHGDGPFAVSTAEYLRKK
LKSKSES

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=242, Percent_Identity=34.297520661157, Blast_Score=151, Evalue=5e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 27030; Mature: 27030

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRINCDMGESFGLWQLGNDSAVMPALDMANIACGMHASDPSVMMKTVALAKAHGVTIGAH
CEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECC
PGYNDIQGFGRRDISMDSDDLAALFIYQLGALEGVCQSQQTSLSYVKPHGALYNAMMKND
CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCHHEECCCHHHHHHHHCCH
AILQTLLEALKRYDATLPLVIMAVPDHQRYVDMAKEYGITLWFEAFVDRAYDEQGRLVPR
HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCEEHHHHHHHHHHHCCCCCCCCC
SVPGSSHQSDEAIQKQANQLIDEGCVTTLNGDIIKIHADTLCIHGDGPFAVSTAEYLRKK
CCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCEEEEEEEEEEEECCCCCEECHHHHHHHH
LKSKSES
HHHCCCC
>Mature Secondary Structure
MRINCDMGESFGLWQLGNDSAVMPALDMANIACGMHASDPSVMMKTVALAKAHGVTIGAH
CEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECC
PGYNDIQGFGRRDISMDSDDLAALFIYQLGALEGVCQSQQTSLSYVKPHGALYNAMMKND
CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCHHEECCCHHHHHHHHCCH
AILQTLLEALKRYDATLPLVIMAVPDHQRYVDMAKEYGITLWFEAFVDRAYDEQGRLVPR
HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCEEHHHHHHHHHHHCCCCCCCCC
SVPGSSHQSDEAIQKQANQLIDEGCVTTLNGDIIKIHADTLCIHGDGPFAVSTAEYLRKK
CCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCEEEEEEEEEEEECCCCCEECHHHHHHHH
LKSKSES
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA