Click here to switch to the map view.

The map label for this gene is yedJ [H]

Identifier: 59711942

GI number: 59711942

Start: 1482959

End: 1483591

Strand: Reverse

Name: yedJ [H]

Synonym: VF_1335

Alternate gene names: 59711942

Gene position: 1483591-1482959 (Counterclockwise)

Preceding gene: 59711943

Following gene: 59711939

Centisome position: 51.2

GC content: 39.34

Gene sequence:

>633_bases
ATGCAATCTATAGAACACTTTGAGCCTCAGTTTTTGAGTTTTATCCAAAAAGAGATGGTTCAAGACTTAGCGCATGATAT
TAACCATGTATTGCGGGTTGTCAGTATGGCAAAGCGTTTATGTGTTGAAGAGAAGGGAAAAGAGGCGGTGGTTATTCCAG
CAGCTTATTTACATGATTGCTTTTCTTTTGCGAAAGATCATTCTAATCGTTCTCAAAGCTCGGCATTTGCTGCGGATAAA
GCGTTGGTATTTTTAAAGGAGATTGGCTATCCATCAGAGTATTATGATGAGATACACCATGCGATTGTCGCTCATAGTTT
TAGTGCTAAAGTAGAAACGAGAACGTTAGAAGCAAAGATCGTTCAAGATGCAGATAGGTTGGATGCTTTAGGGGCAATAG
GCATCGCTCGTTGCCTACAAGTCAGTACAAAATTAAATTCACCACTTTACTCCATTGATGATCCATTTTGTTATCATAGA
GAGCCGAATGATAAGGCTTATACCATCGATCATTTTTATGCCAAGTTGCTAACACTAGCGAATACGATGAAAACGACATC
TGCGGTAGCTGAAGCCGAAAAACGCACTCAATATATGCGTGATTACTTAACTCAACTAGAGAGTGAGTTGTAA

Upstream 100 bases:

>100_bases
TTGAAGAGATATTCTGGTATTTAAGCCCTTATTTAATTTGTATTGCGATTTCAGTTCGAGTGACCAAAGTATCGGCTGAG
CTTAAGTTGGAGAAACAACA

Downstream 100 bases:

>100_bases
TAAAAAGGGGGTAAATATCCCCCTTTAACTTGTCACTTTATTTCATTAATTCTTGGTCTACATAATGCAGAGCAAGATGT
TGCGCTTCTAGTTGTACATC

Product: phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MQSIEHFEPQFLSFIQKEMVQDLAHDINHVLRVVSMAKRLCVEEKGKEAVVIPAAYLHDCFSFAKDHSNRSQSSAFAADK
ALVFLKEIGYPSEYYDEIHHAIVAHSFSAKVETRTLEAKIVQDADRLDALGAIGIARCLQVSTKLNSPLYSIDDPFCYHR
EPNDKAYTIDHFYAKLLTLANTMKTTSAVAEAEKRTQYMRDYLTQLESEL

Sequences:

>Translated_210_residues
MQSIEHFEPQFLSFIQKEMVQDLAHDINHVLRVVSMAKRLCVEEKGKEAVVIPAAYLHDCFSFAKDHSNRSQSSAFAADK
ALVFLKEIGYPSEYYDEIHHAIVAHSFSAKVETRTLEAKIVQDADRLDALGAIGIARCLQVSTKLNSPLYSIDDPFCYHR
EPNDKAYTIDHFYAKLLTLANTMKTTSAVAEAEKRTQYMRDYLTQLESEL
>Mature_210_residues
MQSIEHFEPQFLSFIQKEMVQDLAHDINHVLRVVSMAKRLCVEEKGKEAVVIPAAYLHDCFSFAKDHSNRSQSSAFAADK
ALVFLKEIGYPSEYYDEIHHAIVAHSFSAKVETRTLEAKIVQDADRLDALGAIGIARCLQVSTKLNSPLYSIDDPFCYHR
EPNDKAYTIDHFYAKLLTLANTMKTTSAVAEAEKRTQYMRDYLTQLESEL

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=210, Percent_Identity=40.9523809523809, Blast_Score=164, Evalue=5e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23880; Mature: 23880

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSIEHFEPQFLSFIQKEMVQDLAHDINHVLRVVSMAKRLCVEEKGKEAVVIPAAYLHDC
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHH
FSFAKDHSNRSQSSAFAADKALVFLKEIGYPSEYYDEIHHAIVAHSFSAKVETRTLEAKI
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQDADRLDALGAIGIARCLQVSTKLNSPLYSIDDPFCYHREPNDKAYTIDHFYAKLLTLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH
NTMKTTSAVAEAEKRTQYMRDYLTQLESEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQSIEHFEPQFLSFIQKEMVQDLAHDINHVLRVVSMAKRLCVEEKGKEAVVIPAAYLHDC
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHH
FSFAKDHSNRSQSSAFAADKALVFLKEIGYPSEYYDEIHHAIVAHSFSAKVETRTLEAKI
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQDADRLDALGAIGIARCLQVSTKLNSPLYSIDDPFCYHREPNDKAYTIDHFYAKLLTLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH
NTMKTTSAVAEAEKRTQYMRDYLTQLESEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]