Click here to switch to the map view.

The map label for this gene is 59711943

Identifier: 59711943

GI number: 59711943

Start: 1483579

End: 1484190

Strand: Reverse

Name: 59711943

Synonym: VF_1336

Alternate gene names: NA

Gene position: 1484190-1483579 (Counterclockwise)

Preceding gene: 59711944

Following gene: 59711942

Centisome position: 51.22

GC content: 38.89

Gene sequence:

>612_bases
ATGACATTGCTGCTGACTGGGTTTCTTCATATTCCATTATGGTGTGGTAAAAATTTAACGAAGATCCAATGGAAGAAAGT
GGATTACCTTTGGCCTTTGGTTGCCGCTATTGGGTTGATGGGGACGGTCTCAGAGGTTCGCTCAAGAGTTGCTACCGATT
GGGCTGAAACTGAACACACACGAGCAGTAACCAGCCTAGAATCCATTAATAGTTATACCGTTAATCAATTAAAAAGCTAT
TTGTGCTCTGGAGCGACGGGGGTAGAGGATGATCTTGTATCAAAACAATCGTGTTCTTGGTTTCTTGATTCAGCAAAATA
TTTAGAATCTGTTCGATTTAATGATTTACCCAATATTGGATTTGAAAGTCTACCGCCAATTACGTTTAGCCAAAGCATTA
TTGAATCCGATGTGATTTGGTTGCGTGGTATGTTTGATAATTATAAAACTCAAAAACAGGTTTATGAGACCACACTACAA
GAAACGAAGAAGCACCCACTTGAAGAGATATTCTGGTATTTAAGCCCTTATTTAATTTGTATTGCGATTTCAGTTCGAGT
GACCAAAGTATCGGCTGAGCTTAAGTTGGAGAAACAACAATGCAATCTATAG

Upstream 100 bases:

>100_bases
TTTTGGATTGTATATTTAGAAAAATGAACATATTTAGGTAGTTATGGATAGTTTTTTTAGTAGTGAGATTATTCTTGCGC
ATTCGACTTTCTTTTTCTTT

Downstream 100 bases:

>100_bases
AACACTTTGAGCCTCAGTTTTTGAGTTTTATCCAAAAAGAGATGGTTCAAGACTTAGCGCATGATATTAACCATGTATTG
CGGGTTGTCAGTATGGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTLLLTGFLHIPLWCGKNLTKIQWKKVDYLWPLVAAIGLMGTVSEVRSRVATDWAETEHTRAVTSLESINSYTVNQLKSY
LCSGATGVEDDLVSKQSCSWFLDSAKYLESVRFNDLPNIGFESLPPITFSQSIIESDVIWLRGMFDNYKTQKQVYETTLQ
ETKKHPLEEIFWYLSPYLICIAISVRVTKVSAELKLEKQQCNL

Sequences:

>Translated_203_residues
MTLLLTGFLHIPLWCGKNLTKIQWKKVDYLWPLVAAIGLMGTVSEVRSRVATDWAETEHTRAVTSLESINSYTVNQLKSY
LCSGATGVEDDLVSKQSCSWFLDSAKYLESVRFNDLPNIGFESLPPITFSQSIIESDVIWLRGMFDNYKTQKQVYETTLQ
ETKKHPLEEIFWYLSPYLICIAISVRVTKVSAELKLEKQQCNL
>Mature_202_residues
TLLLTGFLHIPLWCGKNLTKIQWKKVDYLWPLVAAIGLMGTVSEVRSRVATDWAETEHTRAVTSLESINSYTVNQLKSYL
CSGATGVEDDLVSKQSCSWFLDSAKYLESVRFNDLPNIGFESLPPITFSQSIIESDVIWLRGMFDNYKTQKQVYETTLQE
TKKHPLEEIFWYLSPYLICIAISVRVTKVSAELKLEKQQCNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23225; Mature: 23094

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLLTGFLHIPLWCGKNLTKIQWKKVDYLWPLVAAIGLMGTVSEVRSRVATDWAETEHT
CEEEEEHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAVTSLESINSYTVNQLKSYLCSGATGVEDDLVSKQSCSWFLDSAKYLESVRFNDLPNIG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FESLPPITFSQSIIESDVIWLRGMFDNYKTQKQVYETTLQETKKHPLEEIFWYLSPYLIC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IAISVRVTKVSAELKLEKQQCNL
HHHHHHHEEEHHHHEECHHHCCC
>Mature Secondary Structure 
TLLLTGFLHIPLWCGKNLTKIQWKKVDYLWPLVAAIGLMGTVSEVRSRVATDWAETEHT
EEEEEHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAVTSLESINSYTVNQLKSYLCSGATGVEDDLVSKQSCSWFLDSAKYLESVRFNDLPNIG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FESLPPITFSQSIIESDVIWLRGMFDNYKTQKQVYETTLQETKKHPLEEIFWYLSPYLIC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IAISVRVTKVSAELKLEKQQCNL
HHHHHHHEEEHHHHEECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA