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The map label for this gene is ycbW [H]

Identifier: 59711893

GI number: 59711893

Start: 1434951

End: 1435574

Strand: Direct

Name: ycbW [H]

Synonym: VF_1286

Alternate gene names: 59711893

Gene position: 1434951-1435574 (Clockwise)

Preceding gene: 59711892

Following gene: 228873813

Centisome position: 49.52

GC content: 39.1

Gene sequence:

>624_bases
ATGGAAATTTTCGCTATAAAATTGCATCCATTGATATTTGGCTGGCACGGGATTTTTCCCATTTTCAAGAGAGAATTCAT
AATGCTTAAACCTAGTGATACATGGACTTGGTATTACGATAATAAAGCACAATCTCTAATGCTTGATTTGGGCATGGATA
TGGTCTTTTGTGTAAACCTTCCACATAAAGTATTAGTCGAAGGCGCATTTTCTGAATGCAAATTCTCTGTAGATGATGCA
TCTGCCTATCAAATGTTCGTTGAACACATTTCTTATCTCCCTCTATCTGAACCTCGTAAAGTAGAGCTTGCTCTTAATTG
TGTAGCAGCTAAACGTTTTCATAAGCCTATGCTTCCTAAAAGCTGGTTTTTTGAGACTCAAAGCGATGCAGGCTATGCTC
CTGAGGAAGGTGAAGTTATCTCTCTTAAGAATGATTTAGGGGAAGGGCACTTCATTATTGTTGAAAACTACGAATGTGCA
AGTATGTGTATGCTGGTGGACATGGACGCTTTCGCTCTAAATCCGACTAAATACATGGCCTTTTGTGAACCAATTAAAGT
AATGCATGACCGCATGGCTCCAATGCAGGTAGTCAACTCTTCGTACTATGCAATGGTAGGTTAA

Upstream 100 bases:

>100_bases
TTTTAATAAAGGGGAGAATAATATTTTCCCCTTTTTTTATTGCTAACCTCTTGTAAAATTAACAGTTAATTGCATCAATG
AATTTTTTACGCGAAAACAG

Downstream 100 bases:

>100_bases
GGCAAAACGACGTTTCTTTATCCTTAATTTATCATTTGTTTTTTTGCTTTATTTCCCTTTCTAATTATATCGTTTCCTTC
CTTTGATGCAGCTGCCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MEIFAIKLHPLIFGWHGIFPIFKREFIMLKPSDTWTWYYDNKAQSLMLDLGMDMVFCVNLPHKVLVEGAFSECKFSVDDA
SAYQMFVEHISYLPLSEPRKVELALNCVAAKRFHKPMLPKSWFFETQSDAGYAPEEGEVISLKNDLGEGHFIIVENYECA
SMCMLVDMDAFALNPTKYMAFCEPIKVMHDRMAPMQVVNSSYYAMVG

Sequences:

>Translated_207_residues
MEIFAIKLHPLIFGWHGIFPIFKREFIMLKPSDTWTWYYDNKAQSLMLDLGMDMVFCVNLPHKVLVEGAFSECKFSVDDA
SAYQMFVEHISYLPLSEPRKVELALNCVAAKRFHKPMLPKSWFFETQSDAGYAPEEGEVISLKNDLGEGHFIIVENYECA
SMCMLVDMDAFALNPTKYMAFCEPIKVMHDRMAPMQVVNSSYYAMVG
>Mature_207_residues
MEIFAIKLHPLIFGWHGIFPIFKREFIMLKPSDTWTWYYDNKAQSLMLDLGMDMVFCVNLPHKVLVEGAFSECKFSVDDA
SAYQMFVEHISYLPLSEPRKVELALNCVAAKRFHKPMLPKSWFFETQSDAGYAPEEGEVISLKNDLGEGHFIIVENYECA
SMCMLVDMDAFALNPTKYMAFCEPIKVMHDRMAPMQVVNSSYYAMVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081807, Length=175, Percent_Identity=34.2857142857143, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009809 [H]

Pfam domain/function: PF07126 DUF1379 [H]

EC number: NA

Molecular weight: Translated: 23799; Mature: 23799

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFAIKLHPLIFGWHGIFPIFKREFIMLKPSDTWTWYYDNKAQSLMLDLGMDMVFCVNL
CEEEEEEECEEEEEHHHHCHHCCCEEEEECCCCCEEEEECCCCCEEEECCCCCEEEEECC
PHKVLVEGAFSECKFSVDDASAYQMFVEHISYLPLSEPRKVELALNCVAAKRFHKPMLPK
CHHHEEECCHHHCEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHCCCCCCC
SWFFETQSDAGYAPEEGEVISLKNDLGEGHFIIVENYECASMCMLVDMDAFALNPTKYMA
CCEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHEEEEEECCCEEECCHHHHH
FCEPIKVMHDRMAPMQVVNSSYYAMVG
HHHHHHHHHHCCCHHHHHCCCEEEEEC
>Mature Secondary Structure
MEIFAIKLHPLIFGWHGIFPIFKREFIMLKPSDTWTWYYDNKAQSLMLDLGMDMVFCVNL
CEEEEEEECEEEEEHHHHCHHCCCEEEEECCCCCEEEEECCCCCEEEECCCCCEEEEECC
PHKVLVEGAFSECKFSVDDASAYQMFVEHISYLPLSEPRKVELALNCVAAKRFHKPMLPK
CHHHEEECCHHHCEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHCCCCCCC
SWFFETQSDAGYAPEEGEVISLKNDLGEGHFIIVENYECASMCMLVDMDAFALNPTKYMA
CCEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHEEEEEECCCEEECCHHHHH
FCEPIKVMHDRMAPMQVVNSSYYAMVG
HHHHHHHHHHCCCHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]