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The map label for this gene is yajQ [C]

Identifier: 59711847

GI number: 59711847

Start: 1379860

End: 1380342

Strand: Reverse

Name: yajQ [C]

Synonym: VF_1240

Alternate gene names: 59711847

Gene position: 1380342-1379860 (Counterclockwise)

Preceding gene: 59711848

Following gene: 59711841

Centisome position: 47.64

GC content: 38.92

Gene sequence:

>483_bases
ATGCCTGCTTTTGATATTGTCTCTGAAGTTGATAATGTAGAACTGAAGAATGCGGTTGATAACGCAACACGTGAACTTGC
AACTCGCTTTGATTTTCGTGGCGTTGACGCTAGCTTTGAACTTAAAGGCGAAAACATCAAAATCAAAGCTGAAGATGATT
TCCAACTGTCTCAACTAGTTGATATTCTTCGTGGTAACCTAGCAAAACGTGGCGTTGATGCTCGTGCTATGGATATCAAA
GATGCGGTTCACTCAGGTAAGAATTTTTACCAAGACATCGATTTTAAACAAGGTGTTGATACGCTAATTGCTAAGAAATT
AGTAAAAGAAATCAAAGCATCTAAAATCAAAGTTCAAGCAGCGATTCAAGGTGAACAACTGCGTATCACTGGTAAAAAGC
GTGATGATCTACAAGCGGTAATGGCATTAGTTCGTGAAGGTGATTTTGGTCAACCTTTCCAATTCACTAACTTCCGTGAC
TAA

Upstream 100 bases:

>100_bases
TCTATTACAGACCCATGTTTAAGTTGGGAAGATACCGTGGCTATGTTAGACATGTTATCGAATACTATTAAAACATCTCG
TTAATTTAAGGATTAAAACT

Downstream 100 bases:

>100_bases
TTACTGTTAGTTTAAGTTTGATAGATAAAAAAAGCGCCTCTACTTTTCAGTGAGGCGCTTTTTATTATTTACTGTTCAAT
TCTATTCACTAATCAAACGT

Product: putative nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MPAFDIVSEVDNVELKNAVDNATRELATRFDFRGVDASFELKGENIKIKAEDDFQLSQLVDILRGNLAKRGVDARAMDIK
DAVHSGKNFYQDIDFKQGVDTLIAKKLVKEIKASKIKVQAAIQGEQLRITGKKRDDLQAVMALVREGDFGQPFQFTNFRD

Sequences:

>Translated_160_residues
MPAFDIVSEVDNVELKNAVDNATRELATRFDFRGVDASFELKGENIKIKAEDDFQLSQLVDILRGNLAKRGVDARAMDIK
DAVHSGKNFYQDIDFKQGVDTLIAKKLVKEIKASKIKVQAAIQGEQLRITGKKRDDLQAVMALVREGDFGQPFQFTNFRD
>Mature_159_residues
PAFDIVSEVDNVELKNAVDNATRELATRFDFRGVDASFELKGENIKIKAEDDFQLSQLVDILRGNLAKRGVDARAMDIKD
AVHSGKNFYQDIDFKQGVDTLIAKKLVKEIKASKIKVQAAIQGEQLRITGKKRDDLQAVMALVREGDFGQPFQFTNFRD

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family

Homologues:

Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=59.5092024539877, Blast_Score=198, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1240_VIBF1 (Q5E5G1)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_204623.1
- HSSP:   P44096
- ProteinModelPortal:   Q5E5G1
- SMR:   Q5E5G1
- STRING:   Q5E5G1
- GeneID:   3277579
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_1240
- NMPDR:   fig|312309.3.peg.1089
- eggNOG:   COG1666
- HOGENOM:   HBG290634
- OMA:   LQFTNYR
- PhylomeDB:   Q5E5G1
- ProtClustDB:   PRK05412
- BioCyc:   VFIS312309:VF1240-MONOMER
- HAMAP:   MF_00632
- InterPro:   IPR007551

Pfam domain/function: PF04461 DUF520

EC number: NA

Molecular weight: Translated: 17992; Mature: 17860

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFDIVSEVDNVELKNAVDNATRELATRFDFRGVDASFELKGENIKIKAEDDFQLSQLV
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCHHHHH
DILRGNLAKRGVDARAMDIKDAVHSGKNFYQDIDFKQGVDTLIAKKLVKEIKASKIKVQA
HHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCHHCCHHHHHHHHHHHHHHHHHEEEEE
AIQGEQLRITGKKRDDLQAVMALVREGDFGQPFQFTNFRD
EECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PAFDIVSEVDNVELKNAVDNATRELATRFDFRGVDASFELKGENIKIKAEDDFQLSQLV
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCHHHHH
DILRGNLAKRGVDARAMDIKDAVHSGKNFYQDIDFKQGVDTLIAKKLVKEIKASKIKVQA
HHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCHHCCHHHHHHHHHHHHHHHHHEEEEE
AIQGEQLRITGKKRDDLQAVMALVREGDFGQPFQFTNFRD
EECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA