| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is hutA [H]
Identifier: 59711841
GI number: 59711841
Start: 1369769
End: 1371967
Strand: Reverse
Name: hutA [H]
Synonym: VF_1234
Alternate gene names: 59711841
Gene position: 1371967-1369769 (Counterclockwise)
Preceding gene: 59711847
Following gene: 59711832
Centisome position: 47.35
GC content: 39.56
Gene sequence:
>2199_bases ATGTCTAATAAAAAAACATTTTTAGCAGCGTCTATTCTCGTTGCACTATCTCCCACTCTCCAGGCTGAAACCTCATCAAA TAAAGAAACAACCATGTTTGATGAAGTGGTTGTTTCTGCAACTCGTACAGAGCAAAGCATTAAAGACACATCCAGTTCAA TTTCAAAAGTCACATCAGATGATATTGAAAAAACAATGGCAACCGACATTCAAGATGCTCTGAAATACACTCCAGGTGTT TCGGCTAATGGCGGTGGCCGTTTTGGTCTATCAGGCTTTACCGTGCGCGGCATGAGTGACAGCCGTATAAAAATGTTAGT TGATGGTGTTCAACAACCAACGCCTTATAACCCTGGTGCAAACGAACAACGTAAATACCCAAGCACTATTGAAATAGATA CGCTAAAAGCAATTGAGGTAAATAAAGGGCCTTCTTCTACTCTATACGGCTCAGATGCACTTGGCGGAACAGTGCTAATG GAAACGAAAAATCCTGAAGATATCTTAAGAACCGATGGCGACGAAAACGCATTTGAAGTAAAAACCAGCTATAACAGCAT TGATACAAGCTCAAAGACAACGGGCACATGGGCAATGCGTGCGGCAGAGTTAGAAACACTTATCATGCTGACGTATAAAA AAGGCAATGAATCACAAACTCATTCAAATGGTGCTGATATTGAAGGTCCTGATCGCGGTGCTGCTAACCCAGCCGATGCA CAAATCGGTAACCTTCTTGCTAAAGCCTTTTACCAATTAAACGATTCACATCGTATCGGTGCTACTGTTGAATACTTCAC CTCTCAATACGATGAAGATGAATTATCACAAAATGGTTATTCGATGATGAGTCGAGGCACCCCAATCATTACTTATTATG ACAATTACAATAAAGATACAAACACTCGATTACGTGTTGGTTTAGAGCACGAATGGCAAGCGAATAATTTATTATTCGAT ACGCTAGAATCAAAATTAAACGTACAACAAACTGAATCATTGTCAGAAAACTACGATACTTCAACAGGTCCTTATGGTAG TGGTCGTCGTATGCGTGAACGTATTGCTACTGATGATTCTATCCAGTTTGACGCACAATTTGATAAAATTGCCGAGTTTG GAGAAGGATTCCATCAAATCACTTATGGTGTAAGCTTTAGACAAAACAAGTTCGCAACTGAAAACACCGATTATAAATAC GACAAAGGCACCGTTGGACCAGGTCATACCGATATGCCTGATGCAACAATGACTCAATACGGTATTTTTGCACAAGACCA AGCTTTCTTATTCAATGAACAATTAGTGCTAACAGCAGGTTTACGCTATGACTCATTCAAAGCAGAACCTGAAACAAATG AAGGCTTTAAAACAGAATATCCTGATAGCCAAAATGACGCTTTCACAGCTAAGTTAGGCTCGGTTTACCATATTAATAAT AATTTCAGCGTACTTGGTCAAATTAGCCAAGGATTCAAAGCCCCGACTCTGCAAGATATGTACTACTTTTACGATAGTGG CGCTGTCATCGATGCAAACCCAGATCTAAAAGCGGAAAGCAGTATTTCGTATGAAGCAGGTATTCGAGCTCAATCTAATG CCGCACAACTTGAATTAATCGCTTTCTATAATGATTATTCTGATTTCATCAATCAACAATACTTAGGTAAAGTCGTTGGT GGCCCGAACGATGGTAAAGAGCATTATACAAAAGAGAATATCGATTCAGCGGAAATTTATGGTATTGAATTTAGCTCAAC GTATTTATTAGATGAAGCCTTCAATGCACCTCAAGGTACTTACTCTAAATTAAGCATTGCTTACGCAGAAGGCCGAGATA AAAAGACAGGGGCTCCGATAGACAGTGTTGCTCCTCTTACTTCAAACCTAGGCTTAGGTTATGACTCTGTTGGTTACACT TACGGTGCTTTATTAAACATTAATATGGTGGCAGGCAAAGATAAATGGTCAAACGTTGGTCATGAAAACATCAATGTTGC AGGTTACACCTTGGTTGATCTAACCGCCTACTATAAACCAATGAAGGATTTAACACTTCGTGGTGGTTTATTTAATGCGT TTGATAAGCAGTACTGGTTGTACAACGACATGATTGGTACTGAATCTGGCGATGATGGCATTGATCGTAAAGCTCAAGCA GGTCGTAACTGGGGTATTGAGTTAGATTATAAATTCTAA
Upstream 100 bases:
>100_bases AACAAAAAACGAAAAGATCAAATGAAAATGATAGTAATTATCATTCGTAATATGTATTATCTCCGGCAATTATGAGAGGA CAACTTCAAAGGAAAAATTC
Downstream 100 bases:
>100_bases AAAATAGCACTCAACGTTAATTGGCTAGTTCAAAGCGGCATCATCGCCGCTTTTTTTATGTTTGTTGTATTATGATTTTA CTACTTCAGAGGGTTCAAAT
Product: heme transport protein HutA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 732; Mature: 731
Protein sequence:
>732_residues MSNKKTFLAASILVALSPTLQAETSSNKETTMFDEVVVSATRTEQSIKDTSSSISKVTSDDIEKTMATDIQDALKYTPGV SANGGGRFGLSGFTVRGMSDSRIKMLVDGVQQPTPYNPGANEQRKYPSTIEIDTLKAIEVNKGPSSTLYGSDALGGTVLM ETKNPEDILRTDGDENAFEVKTSYNSIDTSSKTTGTWAMRAAELETLIMLTYKKGNESQTHSNGADIEGPDRGAANPADA QIGNLLAKAFYQLNDSHRIGATVEYFTSQYDEDELSQNGYSMMSRGTPIITYYDNYNKDTNTRLRVGLEHEWQANNLLFD TLESKLNVQQTESLSENYDTSTGPYGSGRRMRERIATDDSIQFDAQFDKIAEFGEGFHQITYGVSFRQNKFATENTDYKY DKGTVGPGHTDMPDATMTQYGIFAQDQAFLFNEQLVLTAGLRYDSFKAEPETNEGFKTEYPDSQNDAFTAKLGSVYHINN NFSVLGQISQGFKAPTLQDMYYFYDSGAVIDANPDLKAESSISYEAGIRAQSNAAQLELIAFYNDYSDFINQQYLGKVVG GPNDGKEHYTKENIDSAEIYGIEFSSTYLLDEAFNAPQGTYSKLSIAYAEGRDKKTGAPIDSVAPLTSNLGLGYDSVGYT YGALLNINMVAGKDKWSNVGHENINVAGYTLVDLTAYYKPMKDLTLRGGLFNAFDKQYWLYNDMIGTESGDDGIDRKAQA GRNWGIELDYKF
Sequences:
>Translated_732_residues MSNKKTFLAASILVALSPTLQAETSSNKETTMFDEVVVSATRTEQSIKDTSSSISKVTSDDIEKTMATDIQDALKYTPGV SANGGGRFGLSGFTVRGMSDSRIKMLVDGVQQPTPYNPGANEQRKYPSTIEIDTLKAIEVNKGPSSTLYGSDALGGTVLM ETKNPEDILRTDGDENAFEVKTSYNSIDTSSKTTGTWAMRAAELETLIMLTYKKGNESQTHSNGADIEGPDRGAANPADA QIGNLLAKAFYQLNDSHRIGATVEYFTSQYDEDELSQNGYSMMSRGTPIITYYDNYNKDTNTRLRVGLEHEWQANNLLFD TLESKLNVQQTESLSENYDTSTGPYGSGRRMRERIATDDSIQFDAQFDKIAEFGEGFHQITYGVSFRQNKFATENTDYKY DKGTVGPGHTDMPDATMTQYGIFAQDQAFLFNEQLVLTAGLRYDSFKAEPETNEGFKTEYPDSQNDAFTAKLGSVYHINN NFSVLGQISQGFKAPTLQDMYYFYDSGAVIDANPDLKAESSISYEAGIRAQSNAAQLELIAFYNDYSDFINQQYLGKVVG GPNDGKEHYTKENIDSAEIYGIEFSSTYLLDEAFNAPQGTYSKLSIAYAEGRDKKTGAPIDSVAPLTSNLGLGYDSVGYT YGALLNINMVAGKDKWSNVGHENINVAGYTLVDLTAYYKPMKDLTLRGGLFNAFDKQYWLYNDMIGTESGDDGIDRKAQA GRNWGIELDYKF >Mature_731_residues SNKKTFLAASILVALSPTLQAETSSNKETTMFDEVVVSATRTEQSIKDTSSSISKVTSDDIEKTMATDIQDALKYTPGVS ANGGGRFGLSGFTVRGMSDSRIKMLVDGVQQPTPYNPGANEQRKYPSTIEIDTLKAIEVNKGPSSTLYGSDALGGTVLME TKNPEDILRTDGDENAFEVKTSYNSIDTSSKTTGTWAMRAAELETLIMLTYKKGNESQTHSNGADIEGPDRGAANPADAQ IGNLLAKAFYQLNDSHRIGATVEYFTSQYDEDELSQNGYSMMSRGTPIITYYDNYNKDTNTRLRVGLEHEWQANNLLFDT LESKLNVQQTESLSENYDTSTGPYGSGRRMRERIATDDSIQFDAQFDKIAEFGEGFHQITYGVSFRQNKFATENTDYKYD KGTVGPGHTDMPDATMTQYGIFAQDQAFLFNEQLVLTAGLRYDSFKAEPETNEGFKTEYPDSQNDAFTAKLGSVYHINNN FSVLGQISQGFKAPTLQDMYYFYDSGAVIDANPDLKAESSISYEAGIRAQSNAAQLELIAFYNDYSDFINQQYLGKVVGG PNDGKEHYTKENIDSAEIYGIEFSSTYLLDEAFNAPQGTYSKLSIAYAEGRDKKTGAPIDSVAPLTSNLGLGYDSVGYTY GALLNINMVAGKDKWSNVGHENINVAGYTLVDLTAYYKPMKDLTLRGGLFNAFDKQYWLYNDMIGTESGDDGIDRKAQAG RNWGIELDYKF
Specific function: Acts as a receptor for hemoglobin or the hemoglobin/haptoglobin complex and is required for heme uptake [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790405, Length=697, Percent_Identity=24.103299856528, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI1788478, Length=128, Percent_Identity=37.5, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1786798, Length=294, Percent_Identity=24.8299319727891, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010949 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80832; Mature: 80700
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKKTFLAASILVALSPTLQAETSSNKETTMFDEVVVSATRTEQSIKDTSSSISKVTSD CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIEKTMATDIQDALKYTPGVSANGGGRFGLSGFTVRGMSDSRIKMLVDGVQQPTPYNPGA HHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCCCHHHHHHHCCCCCCCCCCCC NEQRKYPSTIEIDTLKAIEVNKGPSSTLYGSDALGGTVLMETKNPEDILRTDGDENAFEV CCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCEEEE KTSYNSIDTSSKTTGTWAMRAAELETLIMLTYKKGNESQTHSNGADIEGPDRGAANPADA EECCCCCCCCCCCCCHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH QIGNLLAKAFYQLNDSHRIGATVEYFTSQYDEDELSQNGYSMMSRGTPIITYYDNYNKDT HHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHCCCHHHHHCCCCEEEEECCCCCCC NTRLRVGLEHEWQANNLLFDTLESKLNVQQTESLSENYDTSTGPYGSGRRMRERIATDDS CCEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCC IQFDAQFDKIAEFGEGFHQITYGVSFRQNKFATENTDYKYDKGTVGPGHTDMPDATMTQY EEECCHHHHHHHHCCCCEEEHCCEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHH GIFAQDQAFLFNEQLVLTAGLRYDSFKAEPETNEGFKTEYPDSQNDAFTAKLGSVYHINN CEEECCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECC NFSVLGQISQGFKAPTLQDMYYFYDSGAVIDANPDLKAESSISYEAGIRAQSNAAQLELI CCEEEEEHHCCCCCCCHHHEEEEEECCEEEECCCCCCCCCCCCHHCCCCCCCCCCEEEEE AFYNDYSDFINQQYLGKVVGGPNDGKEHYTKENIDSAEIYGIEFSSTYLLDEAFNAPQGT EEECCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEECCEEEEHHHCCCCCCC YSKLSIAYAEGRDKKTGAPIDSVAPLTSNLGLGYDSVGYTYGALLNINMVAGKDKWSNVG CCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEEEECCCHHCCCC HENINVAGYTLVDLTAYYKPMKDLTLRGGLFNAFDKQYWLYNDMIGTESGDDGIDRKAQA CCCCEEEEEEEEEHHHHHCCHHHHEECCCHHHHHCCCEEEEECCCCCCCCCCCCCHHHHC GRNWGIELDYKF CCCCCEEEEECC >Mature Secondary Structure SNKKTFLAASILVALSPTLQAETSSNKETTMFDEVVVSATRTEQSIKDTSSSISKVTSD CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIEKTMATDIQDALKYTPGVSANGGGRFGLSGFTVRGMSDSRIKMLVDGVQQPTPYNPGA HHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCCCHHHHHHHCCCCCCCCCCCC NEQRKYPSTIEIDTLKAIEVNKGPSSTLYGSDALGGTVLMETKNPEDILRTDGDENAFEV CCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCEEEE KTSYNSIDTSSKTTGTWAMRAAELETLIMLTYKKGNESQTHSNGADIEGPDRGAANPADA EECCCCCCCCCCCCCHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH QIGNLLAKAFYQLNDSHRIGATVEYFTSQYDEDELSQNGYSMMSRGTPIITYYDNYNKDT HHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHCCCHHHHHCCCCEEEEECCCCCCC NTRLRVGLEHEWQANNLLFDTLESKLNVQQTESLSENYDTSTGPYGSGRRMRERIATDDS CCEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCC IQFDAQFDKIAEFGEGFHQITYGVSFRQNKFATENTDYKYDKGTVGPGHTDMPDATMTQY EEECCHHHHHHHHCCCCEEEHCCEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHH GIFAQDQAFLFNEQLVLTAGLRYDSFKAEPETNEGFKTEYPDSQNDAFTAKLGSVYHINN CEEECCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECC NFSVLGQISQGFKAPTLQDMYYFYDSGAVIDANPDLKAESSISYEAGIRAQSNAAQLELI CCEEEEEHHCCCCCCCHHHEEEEEECCEEEECCCCCCCCCCCCHHCCCCCCCCCCEEEEE AFYNDYSDFINQQYLGKVVGGPNDGKEHYTKENIDSAEIYGIEFSSTYLLDEAFNAPQGT EEECCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEECCEEEEHHHCCCCCCC YSKLSIAYAEGRDKKTGAPIDSVAPLTSNLGLGYDSVGYTYGALLNINMVAGKDKWSNVG CCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEEEECCCHHCCCC HENINVAGYTLVDLTAYYKPMKDLTLRGGLFNAFDKQYWLYNDMIGTESGDDGIDRKAQA CCCCEEEEEEEEEHHHHHCCHHHHEECCCHHHHHCCCEEEEECCCCCCCCCCCCCHHHHC GRNWGIELDYKF CCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]