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The map label for this gene is exbB1 [H]

Identifier: 59711831

GI number: 59711831

Start: 1357592

End: 1358275

Strand: Reverse

Name: exbB1 [H]

Synonym: VF_1224

Alternate gene names: 59711831

Gene position: 1358275-1357592 (Counterclockwise)

Preceding gene: 59711832

Following gene: 59711830

Centisome position: 46.88

GC content: 39.04

Gene sequence:

>684_bases
ATGCTTAACTTTTCACACTTATATTCGCAACTTGGCATTATGGCTCTACCGCTATTAGGCTGCTCATTACTCACTCTTGC
CTTGTTATTAGAACGAACCATTCAGCTTTTACTTTTTTCTGGCTGTTCTCATAAAAAAATACAGTCGACGCTAAATCAAT
TAGAAAAAGACGATACACAAGGTATTCACTCCTTTATTCAAGAATTGAAAAAACGCCGTGCTCTCTCTGCAAAAGGCAAT
GCCATGCTACTTGCTCATCGTGATTTTGAAAAAGGATTACGAGAAGATGTTGCAGGGTTATGGCTTCAAGAAAAGCGCCA
TCAATTGCGTTCTGGATTACGTCTTTTAGCTCTTATTGGCATGATCAGCCCATTACTCGGCTTATTAGGTACGGTTCTTG
GCTTAATAGATATGTTTAAAGATGTAGCAGCAACAACGGGTTCTATCACACCAAATATTCTGGCTGATGGTTTAGGGTTA
GCAATGCGTACAACGGCAATTGGTTTGATCATTGCCTTACCTGCTATCGCAAGCTCACAACTTCTAGGCTTATGGGCTGA
TCGTATCTTGTCACGTTTAGAGCATTCATTAAATTACACTAATTTGTGGATTGAAGGTGTATTTAGCTCAAATGATTCAA
TGAGTGAGAACATCCAACATAAAATCATCAAGGTGAATGCATGA

Upstream 100 bases:

>100_bases
GCAATTTTCACCTCAAGTTATCAATGGCCAAGCGATTGCACACCGAGTGCAGATCCCTGTCAGATTTTCACTAAATTAAT
CAGTTATACCGGATTTAACT

Downstream 100 bases:

>100_bases
TTAAGTCACCTTCTTTCACTTCTGAAGAGTCCATTCAGCCTGATCTGACCCCTTTACTCGATATTATTTTCATCGTAATG
GTTTTTTTATTACTCACCGC

Product: TonB system transport protein ExbB1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MLNFSHLYSQLGIMALPLLGCSLLTLALLLERTIQLLLFSGCSHKKIQSTLNQLEKDDTQGIHSFIQELKKRRALSAKGN
AMLLAHRDFEKGLREDVAGLWLQEKRHQLRSGLRLLALIGMISPLLGLLGTVLGLIDMFKDVAATTGSITPNILADGLGL
AMRTTAIGLIIALPAIASSQLLGLWADRILSRLEHSLNYTNLWIEGVFSSNDSMSENIQHKIIKVNA

Sequences:

>Translated_227_residues
MLNFSHLYSQLGIMALPLLGCSLLTLALLLERTIQLLLFSGCSHKKIQSTLNQLEKDDTQGIHSFIQELKKRRALSAKGN
AMLLAHRDFEKGLREDVAGLWLQEKRHQLRSGLRLLALIGMISPLLGLLGTVLGLIDMFKDVAATTGSITPNILADGLGL
AMRTTAIGLIIALPAIASSQLLGLWADRILSRLEHSLNYTNLWIEGVFSSNDSMSENIQHKIIKVNA
>Mature_227_residues
MLNFSHLYSQLGIMALPLLGCSLLTLALLLERTIQLLLFSGCSHKKIQSTLNQLEKDDTQGIHSFIQELKKRRALSAKGN
AMLLAHRDFEKGLREDVAGLWLQEKRHQLRSGLRLLALIGMISPLLGLLGTVLGLIDMFKDVAATTGSITPNILADGLGL
AMRTTAIGLIIALPAIASSQLLGLWADRILSRLEHSLNYTNLWIEGVFSSNDSMSENIQHKIIKVNA

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 24931; Mature: 24931

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFSHLYSQLGIMALPLLGCSLLTLALLLERTIQLLLFSGCSHKKIQSTLNQLEKDDTQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHH
GIHSFIQELKKRRALSAKGNAMLLAHRDFEKGLREDVAGLWLQEKRHQLRSGLRLLALIG
HHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MISPLLGLLGTVLGLIDMFKDVAATTGSITPNILADGLGLAMRTTAIGLIIALPAIASSQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGLWADRILSRLEHSLNYTNLWIEGVFSSNDSMSENIQHKIIKVNA
HHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCHHHHHHHHHHEECC
>Mature Secondary Structure
MLNFSHLYSQLGIMALPLLGCSLLTLALLLERTIQLLLFSGCSHKKIQSTLNQLEKDDTQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHH
GIHSFIQELKKRRALSAKGNAMLLAHRDFEKGLREDVAGLWLQEKRHQLRSGLRLLALIG
HHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MISPLLGLLGTVLGLIDMFKDVAATTGSITPNILADGLGLAMRTTAIGLIIALPAIASSQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGLWADRILSRLEHSLNYTNLWIEGVFSSNDSMSENIQHKIIKVNA
HHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9781885; 10952301 [H]