| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is tyrP [H]
Identifier: 59711804
GI number: 59711804
Start: 1329535
End: 1330707
Strand: Reverse
Name: tyrP [H]
Synonym: VF_1197
Alternate gene names: 59711804
Gene position: 1330707-1329535 (Counterclockwise)
Preceding gene: 59711806
Following gene: 59711803
Centisome position: 45.93
GC content: 35.12
Gene sequence:
>1173_bases ATGAAGACAAAAGTACTTGGAAGCTCGTTAATTATAGCAGGAACAACCATAGGAGCTGGCATGTTAGCCCTACCTCTTGT TTCCGCTAGTCTAGGATTCTTTACAGCAAGTTTATTAATGATTGGTATTTGGGCAATCATGAGCTATACAAGTCTACTGA TGTTAGAAGTTCATCAATATGGAGAACAGAGCGCAACGCTTCATAGTTTAGCTCGCCAATTTTTAGGAAAACACGGACAA AAAGTTGCAACCTTCTCTATGTTGTTTCTTTTTTACGCTTTGTGTGCGGCTTACATTGCAGGAGGAAGTGAACAATTTCA TTCTAAATTAAATGAGCTGCTTCCTTTTGAGTTTTCAAATTTTACATCAACGATTATCTTTACCTGTATTGTTGCAACCA TCATTACATTTGGTACGAAAACAGTTGATATTATTAACCGTGGTTTATTCACGTTAAAATTAGTTATGTTAGTTTCTATT CTATTCTTTTTAACGCCAAGTATTACTGGAGAATACCTATTAGCACTGCCTGTTGAGCAAGGTGTATTTATTACAGCATT ACCCGTTATTTTCACTTCGTTTGGATTTCATGGCAGTATTCCAGCAATCGTGAACTACCTTGAATTAGATGTTAAAAAGA TCAAAATAAGTCTATTAGTGGGTTCTTCCCTACCTTTAATTGTTTACTTATTTTGGCAAGGAATGACATTAGGCTTGTTG TCACAAAATGAATTTGGCCAAATAAACGGACTAAATCAATTCATCACTGAAATTCAAAGCACAATAGATCACCAATTTAT TCAACAAGCACTCTCTTTATTTGCCGATCTTGCGCTATTAACTTCATTCATTGGTGTAAGTTTGGGATTATTTGAATTTT TACGTGATTCATCTAAAAAATGGCAACAATCATCAATTGTGACCGCTTTATTAACTTACACGCCACCATTATTATTTGCT TTGTTCTACCCACAAGGCTTTATCATGGCTTTAGGCTATGCTGCTATTGCTCTTGTTATTCTTGCTCTATTCTTACCTGT TGCTTTAGTTATTTCAGCGAGAAAAACTAAAAAAGGATCTGAATACCAAGTAATCGGTGGTAACGGAGCACTCTTATTGG TCGTTGCTTTTGGTGTACTTATTATTATGAGTCAACTTTTCAGTTCTCTATAA
Upstream 100 bases:
>100_bases TAATTGTACATTTTTATTGTATTCAATTCAGAATAGTCGTACATTTCTACCATCGAAAATAAGCACCCAAATTTACTCTA ATTTAAGAAAGAAGAAGTAT
Downstream 100 bases:
>100_bases CAACTTAATTATTGATCTTTTATTGAGCCAGTTTGTCTACATTTAACCTAGATAAACTGGCTCTTCTTATTTTTATGTTT TGCATTTTTTCTCGAATAGT
Product: tyrosine transporter
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease [H]
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKTKVLGSSLIIAGTTIGAGMLALPLVSASLGFFTASLLMIGIWAIMSYTSLLMLEVHQYGEQSATLHSLARQFLGKHGQ KVATFSMLFLFYALCAAYIAGGSEQFHSKLNELLPFEFSNFTSTIIFTCIVATIITFGTKTVDIINRGLFTLKLVMLVSI LFFLTPSITGEYLLALPVEQGVFITALPVIFTSFGFHGSIPAIVNYLELDVKKIKISLLVGSSLPLIVYLFWQGMTLGLL SQNEFGQINGLNQFITEIQSTIDHQFIQQALSLFADLALLTSFIGVSLGLFEFLRDSSKKWQQSSIVTALLTYTPPLLFA LFYPQGFIMALGYAAIALVILALFLPVALVISARKTKKGSEYQVIGGNGALLLVVAFGVLIIMSQLFSSL
Sequences:
>Translated_390_residues MKTKVLGSSLIIAGTTIGAGMLALPLVSASLGFFTASLLMIGIWAIMSYTSLLMLEVHQYGEQSATLHSLARQFLGKHGQ KVATFSMLFLFYALCAAYIAGGSEQFHSKLNELLPFEFSNFTSTIIFTCIVATIITFGTKTVDIINRGLFTLKLVMLVSI LFFLTPSITGEYLLALPVEQGVFITALPVIFTSFGFHGSIPAIVNYLELDVKKIKISLLVGSSLPLIVYLFWQGMTLGLL SQNEFGQINGLNQFITEIQSTIDHQFIQQALSLFADLALLTSFIGVSLGLFEFLRDSSKKWQQSSIVTALLTYTPPLLFA LFYPQGFIMALGYAAIALVILALFLPVALVISARKTKKGSEYQVIGGNGALLLVVAFGVLIIMSQLFSSL >Mature_390_residues MKTKVLGSSLIIAGTTIGAGMLALPLVSASLGFFTASLLMIGIWAIMSYTSLLMLEVHQYGEQSATLHSLARQFLGKHGQ KVATFSMLFLFYALCAAYIAGGSEQFHSKLNELLPFEFSNFTSTIIFTCIVATIITFGTKTVDIINRGLFTLKLVMLVSI LFFLTPSITGEYLLALPVEQGVFITALPVIFTSFGFHGSIPAIVNYLELDVKKIKISLLVGSSLPLIVYLFWQGMTLGLL SQNEFGQINGLNQFITEIQSTIDHQFIQQALSLFADLALLTSFIGVSLGLFEFLRDSSKKWQQSSIVTALLTYTPPLLFA LFYPQGFIMALGYAAIALVILALFLPVALVISARKTKKGSEYQVIGGNGALLLVVAFGVLIIMSQLFSSL
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=394, Percent_Identity=44.4162436548223, Blast_Score=327, Evalue=6e-91, Organism=Escherichia coli, GI1790145, Length=394, Percent_Identity=30.7106598984772, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI1789552, Length=382, Percent_Identity=26.9633507853403, Blast_Score=140, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 42442; Mature: 42442
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKVLGSSLIIAGTTIGAGMLALPLVSASLGFFTASLLMIGIWAIMSYTSLLMLEVHQY CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEQSATLHSLARQFLGKHGQKVATFSMLFLFYALCAAYIAGGSEQFHSKLNELLPFEFSN CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH FTSTIIFTCIVATIITFGTKTVDIINRGLFTLKLVMLVSILFFLTPSITGEYLLALPVEQ HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC GVFITALPVIFTSFGFHGSIPAIVNYLELDVKKIKISLLVGSSLPLIVYLFWQGMTLGLL CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCEEEC SQNEFGQINGLNQFITEIQSTIDHQFIQQALSLFADLALLTSFIGVSLGLFEFLRDSSKK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQQSSIVTALLTYTPPLLFALFYPQGFIMALGYAAIALVILALFLPVALVISARKTKKGS HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EYQVIGGNGALLLVVAFGVLIIMSQLFSSL CEEEECCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTKVLGSSLIIAGTTIGAGMLALPLVSASLGFFTASLLMIGIWAIMSYTSLLMLEVHQY CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEQSATLHSLARQFLGKHGQKVATFSMLFLFYALCAAYIAGGSEQFHSKLNELLPFEFSN CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH FTSTIIFTCIVATIITFGTKTVDIINRGLFTLKLVMLVSILFFLTPSITGEYLLALPVEQ HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC GVFITALPVIFTSFGFHGSIPAIVNYLELDVKKIKISLLVGSSLPLIVYLFWQGMTLGLL CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCEEEC SQNEFGQINGLNQFITEIQSTIDHQFIQQALSLFADLALLTSFIGVSLGLFEFLRDSSKK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQQSSIVTALLTYTPPLLFALFYPQGFIMALGYAAIALVILALFLPVALVISARKTKKGS HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EYQVIGGNGALLLVVAFGVLIIMSQLFSSL CEEEECCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3049553; 9097040; 9278503 [H]