| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711803
Identifier: 59711803
GI number: 59711803
Start: 1328472
End: 1329386
Strand: Reverse
Name: 59711803
Synonym: VF_1196
Alternate gene names: NA
Gene position: 1329386-1328472 (Counterclockwise)
Preceding gene: 59711804
Following gene: 59711793
Centisome position: 45.88
GC content: 40.44
Gene sequence:
>915_bases GTGAAAAAACAAGCAATAGCCGGTTTGCTTTTAGGGTGTACAGCATCAACAAATGCTTTCGCACTGGATACTAATAGCGC TTATGATATGGATTATCAAAACGACTGTTCTACTAATATCTACTCTAGCTATTGTTCAAATGCGTCATTTAATTTTTCTC CAATGCGCTTAGATGGTGAGACACCTTCTAAGGTTGCTGAAAATGATTCCCTAGCACAAAGCACACAATTACCGCACTAC CTTCGCGTATCAGATGAGCGTGACTGGGACTACCTAATGGAACAGTCATACACTATTCTTGGTTTAAGTGTTGCAACTGT TGGTTTAATGACTTTTCTTCCTGAAAGCATCACTAAGTGGGATTCTGAAGATTCAAGCATTAAAAACCTAGGCTCTAAGT GGAAAGATAACGTAAGCCAAGGCCCTGTATGGGATAAAGATGAGCACTTCTTAAACTATGTAATGCACCCTTACTTTGGT GGTGTTTACTATACAGCAGCTCGTCACGCAGGCTTTAACGAGTTTGAATCTTTCTTATACTCGACAACAATGTCAACATT CTTCTGGGAGTATGGTGTAGAGGCATTTGCTGAAGTACCATCTATTCAAGATTTATTCGTTACTCCATTCTTTGGTGCTG TTGTCGGTGAAGTAATGCTTCAACAAGAACTTCGTATTACCGAAAATGGTGGCGAAGTAATGGGCTCTGAAACATTAGGT AGCGTAAGTCTATTCTTCTTAAACCCTGTTGGTCATATCCATTACTGGGTAACCGATGCTTGGGGTGATGAGACAGAAGT TAATCTAGCTTACAACGCATGGTTTAGTAATGGTGATGCTGCTCAATACGCTTACGATGCGGGTATGCCTTATACCGACC AGTTTATCGGCCTTGAAGTGAAACTTAAATTCTAA
Upstream 100 bases:
>100_bases TAGATAAACTGGCTCTTCTTATTTTTATGTTTTGCATTTTTTCTCGAATAGTAGATAATTGTGAACTAGCTCAGAAATTT AACTGTATTAAGGACTTTTC
Downstream 100 bases:
>100_bases ATTCACATCAATCAGAATGACAAAAATAAAGGGCATCTTAGTATGCCCTTTATTTTTATAATTAGATGGTCATTAATGGA ATTGGTACTATCTAAACATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKKQAIAGLLLGCTASTNAFALDTNSAYDMDYQNDCSTNIYSSYCSNASFNFSPMRLDGETPSKVAENDSLAQSTQLPHY LRVSDERDWDYLMEQSYTILGLSVATVGLMTFLPESITKWDSEDSSIKNLGSKWKDNVSQGPVWDKDEHFLNYVMHPYFG GVYYTAARHAGFNEFESFLYSTTMSTFFWEYGVEAFAEVPSIQDLFVTPFFGAVVGEVMLQQELRITENGGEVMGSETLG SVSLFFLNPVGHIHYWVTDAWGDETEVNLAYNAWFSNGDAAQYAYDAGMPYTDQFIGLEVKLKF
Sequences:
>Translated_304_residues MKKQAIAGLLLGCTASTNAFALDTNSAYDMDYQNDCSTNIYSSYCSNASFNFSPMRLDGETPSKVAENDSLAQSTQLPHY LRVSDERDWDYLMEQSYTILGLSVATVGLMTFLPESITKWDSEDSSIKNLGSKWKDNVSQGPVWDKDEHFLNYVMHPYFG GVYYTAARHAGFNEFESFLYSTTMSTFFWEYGVEAFAEVPSIQDLFVTPFFGAVVGEVMLQQELRITENGGEVMGSETLG SVSLFFLNPVGHIHYWVTDAWGDETEVNLAYNAWFSNGDAAQYAYDAGMPYTDQFIGLEVKLKF >Mature_304_residues MKKQAIAGLLLGCTASTNAFALDTNSAYDMDYQNDCSTNIYSSYCSNASFNFSPMRLDGETPSKVAENDSLAQSTQLPHY LRVSDERDWDYLMEQSYTILGLSVATVGLMTFLPESITKWDSEDSSIKNLGSKWKDNVSQGPVWDKDEHFLNYVMHPYFG GVYYTAARHAGFNEFESFLYSTTMSTFFWEYGVEAFAEVPSIQDLFVTPFFGAVVGEVMLQQELRITENGGEVMGSETLG SVSLFFLNPVGHIHYWVTDAWGDETEVNLAYNAWFSNGDAAQYAYDAGMPYTDQFIGLEVKLKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34166; Mature: 34166
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQAIAGLLLGCTASTNAFALDTNSAYDMDYQNDCSTNIYSSYCSNASFNFSPMRLDGE CCCHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCC TPSKVAENDSLAQSTQLPHYLRVSDERDWDYLMEQSYTILGLSVATVGLMTFLPESITKW CCHHHHCCCCHHHHHCCCCEEEECCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHC DSEDSSIKNLGSKWKDNVSQGPVWDKDEHFLNYVMHPYFGGVYYTAARHAGFNEFESFLY CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHH STTMSTFFWEYGVEAFAEVPSIQDLFVTPFFGAVVGEVMLQQELRITENGGEVMGSETLG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCC SVSLFFLNPVGHIHYWVTDAWGDETEVNLAYNAWFSNGDAAQYAYDAGMPYTDQFIGLEV CEEEEEECCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCHHEEECCCCCCCCCEEEEEE KLKF EEEC >Mature Secondary Structure MKKQAIAGLLLGCTASTNAFALDTNSAYDMDYQNDCSTNIYSSYCSNASFNFSPMRLDGE CCCHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCC TPSKVAENDSLAQSTQLPHYLRVSDERDWDYLMEQSYTILGLSVATVGLMTFLPESITKW CCHHHHCCCCHHHHHCCCCEEEECCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHC DSEDSSIKNLGSKWKDNVSQGPVWDKDEHFLNYVMHPYFGGVYYTAARHAGFNEFESFLY CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHH STTMSTFFWEYGVEAFAEVPSIQDLFVTPFFGAVVGEVMLQQELRITENGGEVMGSETLG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCC SVSLFFLNPVGHIHYWVTDAWGDETEVNLAYNAWFSNGDAAQYAYDAGMPYTDQFIGLEV CEEEEEECCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCHHEEECCCCCCCCCEEEEEE KLKF EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA