| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711752
Identifier: 59711752
GI number: 59711752
Start: 1268676
End: 1269122
Strand: Direct
Name: 59711752
Synonym: VF_1145
Alternate gene names: NA
Gene position: 1268676-1269122 (Clockwise)
Preceding gene: 59711751
Following gene: 59711753
Centisome position: 43.78
GC content: 40.27
Gene sequence:
>447_bases ATGCAACGTGATTATACTTTTTCTTGTTTGGTAACTATGCCACGTCATGAGCTAGAAGAATTTAGCCACCGTGTCGTTAG CCGTATGGTTCCAGAAGAGACGATGCAAGAGATCTTTACGTTTGATCAAGAAGAAACGACTGATCAAGATCGCATGCAAA CAGCGCAATTAGATGCGATGCTACGTCTTTCTGCTGTAGCGCTTGGTGAAGTGACACACGCTTTTTCTGAATCTGAAAAT GCACAACAAAATAGCTTACGCATGATGCGCCTTATCTTATGGCACACTTATGCAATGCTATTTAATTTAGAAGAAGCGGT ATCTTTAGAGCAGCACTGTGAGCTGGTTGAGAAAATCTTAGCTAAACCACCAACCGATGCATTAAATTGGTTACCTGTAT TATCTAAATTATTAAGTGACTATGCGGCGATTGCTGCGAAAAAATAA
Upstream 100 bases:
>100_bases TCCAAATGAAGATCAATCTTCAGCTGAGCGTCGTATGCGTTTGAAGAATGTGATTCAAAATAAAGCACGCATTACTAAAT TGAAGAAGTAGGGCTGAATT
Downstream 100 bases:
>100_bases GTGATTTAATAGCACTAAACGAAAGGTTGAACGCGAAATCGTTCGGCCTTTTTTTATATCTAAATAAAAAGTGAATATTT TTTCGAATTAACTGTATATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MQRDYTFSCLVTMPRHELEEFSHRVVSRMVPEETMQEIFTFDQEETTDQDRMQTAQLDAMLRLSAVALGEVTHAFSESEN AQQNSLRMMRLILWHTYAMLFNLEEAVSLEQHCELVEKILAKPPTDALNWLPVLSKLLSDYAAIAAKK
Sequences:
>Translated_148_residues MQRDYTFSCLVTMPRHELEEFSHRVVSRMVPEETMQEIFTFDQEETTDQDRMQTAQLDAMLRLSAVALGEVTHAFSESEN AQQNSLRMMRLILWHTYAMLFNLEEAVSLEQHCELVEKILAKPPTDALNWLPVLSKLLSDYAAIAAKK >Mature_148_residues MQRDYTFSCLVTMPRHELEEFSHRVVSRMVPEETMQEIFTFDQEETTDQDRMQTAQLDAMLRLSAVALGEVTHAFSESEN AQQNSLRMMRLILWHTYAMLFNLEEAVSLEQHCELVEKILAKPPTDALNWLPVLSKLLSDYAAIAAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17122; Mature: 17122
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRDYTFSCLVTMPRHELEEFSHRVVSRMVPEETMQEIFTFDQEETTDQDRMQTAQLDAM CCCCCEEHHEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LRLSAVALGEVTHAFSESENAQQNSLRMMRLILWHTYAMLFNLEEAVSLEQHCELVEKIL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKPPTDALNWLPVLSKLLSDYAAIAAKK CCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQRDYTFSCLVTMPRHELEEFSHRVVSRMVPEETMQEIFTFDQEETTDQDRMQTAQLDAM CCCCCEEHHEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LRLSAVALGEVTHAFSESENAQQNSLRMMRLILWHTYAMLFNLEEAVSLEQHCELVEKIL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKPPTDALNWLPVLSKLLSDYAAIAAKK CCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA